Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20pachydermatis_20[genbank_20GCA_5F001278385.1_202015-09- 02] 91 sequences; 8,150,648 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq40 134 3e-26 seq11 123 5e-23 >seq40 Length=1303022 Score = 134 bits (148), Expect = 3e-26 Identities = 167/224 (75%), Gaps = 10/224 (4%) Strand=Plus/Minus Query 279345 GGTGAGGATCTGTGTGACTGTGATTTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAAC 279404 |||||||| |||||| ||||| | ||||||||||| || |||| ||||||||||| ||| Sbjct 288636 GGTGAGGACCTGTGTAACTGTCAGTTCTCGCTCGCCTACGGTGCTAAGATTCTGCTGAAC 288577 Query 279405 TC---TACCC-GCCTCAACATCAAGCGTGGCAACCGGTATGGTCTCATCGGTCCCAATGG 279460 | ||||| || || ||||||||||| |||| || |||||| |||| ||||| Sbjct 288576 ACCGCTACCCTGCGTC----TCAAGCGTGGCCACCGCTACGGTCTCTGTGGTCGTAATGG 288521 Query 279461 AGCGGGTAAGAGCACTCTAATGCGCGCCATTGCAAACGGTCAGCTGGAAGGATTTCCTAA 279520 |||||||| || || ||||||||||| ||||||||| ||| ||| |||| Sbjct 288520 TTCGGGTAAGTCGACCCTTATGCGCGCCATCCAGAACGGTCAGGTGG-AGGGCTTCCCGT 288462 Query 279521 CGCAT-CTGAGGTAAGGACAGTGTATGTAGAGCACGACATCGAC 279563 ||| | ||||| | ||| ||| || ||||||||| ||||| Sbjct 288461 CGCCTGAGGAGGTCAAGACCTGGTACGTCGAGCACGACCTCGAC 288418 Score = 122 bits (134), Expect = 2e-22 Identities = 337/512 (66%), Gaps = 6/512 (1%) Strand=Plus/Minus Query 218506 ATCCCCGTCCCTGACTTCATCGACAAGGAGCTCATTCTTTTCTCGCGGTATGATGTGGAG 218565 |||||| | ||||||| ||| |||||||| | ||||| |||||| | || Sbjct 157179 ATCCCCATTTCTGACTTTATCAACAAGGAGTTGATTCTGTTCTCGATGGCGGACAACATT 157120 Query 218566 CGTTCTATTCCCAGCGTGGTGGATGGCCTCAAGCCATCGCAGCGTAAGATCCTCTTTGCC 218625 || || |||||||| |||||||||| |||||||| ||||| || | || | || Sbjct 157119 CGCTCGATTCCCAGTATGGTGGATGGTCTCAAGCCGGGTCAGCGCAAAGTGCTGTATGGA 157060 Query 218626 GCATTCAAGCGGAACCTGGTTCAAGAAATTAAGGTCGCTCAGTTTTCTGGTTATGTATCC 218685 |||||||| || || ||||| ||||| ||| | ||||| || || Sbjct 157059 TGTTTCAAGCGCAATTTGAAGACGGAAATCAAGGTGCAGCAGCTGCAAGGTTACGTCTCG 157000 Query 218686 GAAATTTCTGGCTACCATCACGGTGAGCAGAGTCTG--CAGGGTGCCATTGTAGGCATGG 218743 ||| | | ||||| || || || ||||||||| || | | ||||| || ||| Sbjct 156999 GAACACACGGCGTACCACCATGGCGACCAGAGTCTGGTCATGACG--ATTGTCGGGTTGG 156942 Query 218744 CACAGGACTATGTGGGCAGTAACAACATGAACTTGCTGCTCCCC-AACGGTCAGTTTGGT 218802 | ||||||||| || || |||||| ||||| | || ||| || || |||||||||||| Sbjct 156941 CGCAGGACTATTGTGGTAGCAACAACGTGAACCTTCT-CTCGCCGAATGGTCAGTTTGGT 156883 Query 218803 TCTCGTCTATTGGGTGGAAAGGATAGTGCTTCTGCCAGGTATATCTTTACAAAGTTGTCG 218862 | ||| |||| || |||||| || ||| | || || || || | || | Sbjct 156882 ACGCGTAGTATGGGCGGTAAGGATGCCGCCAGTGCGCGTTACATTTTCACGGCGGTGCCA 156823 Query 218863 CCCGTGACGCGCCAGGTGTTCAATCAGGCCGATGATGTGCTCCTTAAGTATCTTGAGGAC 218922 | | || ||| || | ||| ||| | ||||||| | | || || || | || ||| Sbjct 156822 CGTATTACACGCAAGCTTTTCCATCCGAAAGATGATGCGTTGCTGAACTACTTGGACGAC 156763 Query 218923 GATGGTTCTTCGATTGAGCCCGAGTGGTATGTGCCTGCTATTCCGTTTTTGCTCGTAAAT 218982 ||||| |||||||| || ||||| ||||||| | ||| |||| | ||| Sbjct 156762 GATGGCCAGAGTATTGAGCCGGAATGGTACGTGCCTGTCGTCCCGCAAGTGCTTTTGAAT 156703 Query 218983 GGTGCCAATGGTATCGGGACAGGGTTCAGTAC 219014 || || | ||||| || || || | ||||| Sbjct 156702 GGAGCGGAGGGTATTGGTACGGGCTGGAGTAC 156671 >seq11 Length=163833 Score = 123 bits (136), Expect = 5e-23 Identities = 549/847 (65%), Gaps = 43/847 (5%) Strand=Plus/Minus Query 251554 ACACGGCGTTCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAG 251613 ||||| || ||||| || || |||||||||| ||| ||||| |||||| ||||| || Sbjct 12855 ACACGACGCTCGAAAAAGTTCGACTTGCCCTGCAGCGAGATGTTCTCCATAAAGTCAAAT 12796 Query 251614 GGGTTTGTGGCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACA 251673 || || || | | ||| ||||| || | ||| || || || | | ||||| |||||| Sbjct 12795 GGATTCGTCGAGTGGTAGTGCTTCGGGTTGCCGAGAGCGACCAGCAGACGGTCGGCCACA 12736 Query 251674 AACTCCAGATACTGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACA-AGGAATTGC 251732 ||||| | ||||| | ||| || || |||||||| || | ||||| ||| | || Sbjct 12735 AACTCAATGTACTGGCACATGAGACGAGCATTCATGCCGAT-AAGCGACACAGGCAGAGC 12677 Query 251733 CTCACAGATGAATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCTTCACCTGTGC 251792 ||| | || ||||| ||| | | || ||||| | || || ||| ||| Sbjct 12676 CTCCGTCAAAAAGTCCTTCTCGATCGAGACAGCCTCGGTAATGATGCGGTTGACC-GTGT 12618 Query 251793 CAGAGACAGCTTG-TTCTCCAGCTTTGAGTACAG-GAGCTCGCCAAACTGTTGGTGCAGA 251850 ||| | | | |||| ||| | | |||| ||| || |||| | ||||||| Sbjct 12617 CAGGGTGCGAGCGCTTCTTCAGGTGACTGAACAGCAAGCACG-CAAAGTCGGTGTGCAGA 12559 Query 251851 CCCTCGTCGCGACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTC 251910 |||||||| || | || | |||||| || | ||| || ||||| | ||||| ||| Sbjct 12558 CCCTCGTCACGGGTAATAAGCTCGTTCGAGAACGACAGACCCGGCATGAGACCACGCTTC 12499 Query 251911 CTGAGCCAGAAGATTG-CGCAAAAGGATCCAGAGAACAGCAGACCCTCGACACACACCCA 251969 | ||||||||||| | ||| ||| || || ||||| | | ||||| || | | Sbjct 12498 TTCAGCCAGAAGATCGACGC-AAACGAGCCCGAGAAGAAGATGCCCTCCACGGCGGCAAA 12440 Query 251970 TGCAACAAGGCGCTCAGCAAACGA------CTTGTCCTGCGA--CA-AGAACTTCTGTGC 252020 || ||||||||||| | ||||| ||||||| || | || ||| | || Sbjct 12439 CGCCACAAGGCGCTCCGAGAACGAGGCACGCTTGTCC-GCAATCCAGCGAA-----GGGC 12386 Query 252021 CCATGCTGCCTTCT--TTCCAACCGCGGGGATTGTTTCGATTGCATCAAAGAGAGAGTTC 252078 ||| | ||||||| ||| || |||| || || ||||| || | || || | | Sbjct 12385 CCACTCGGCCTTCTGCTTC--ACAACGGGAATGGTCTCGATAGCGTTGAACAGGTACTCG 12328 Query 252079 CGCTCGGCATCGTCCTCGATGAGCGCATCAAGCAGGAGAGAGTACATCTCCGAATGGATG 252138 |||| || ||| |||| || || | || || ||||| ||||||| || ||| Sbjct 12327 CGCTGCGCCGTGTCGCGGATGTACGTGTCGATGAGCAGCGAGTAGGTCTCCGAGTGAATG 12268 Query 252139 GATTCGTTGAACATCTGGTAAGCATAGAATAGACGCGCGGAAGGGTCGGTGACTTCCGTG 252198 || | | |||||| || | ||||| || || | | ||||| || Sbjct 12267 TTCTCCATCATAATCTGGAAACCGTAGAAGCAGCGAGCCTCCGCCACCTGCACTTCGTTG 12208 Query 252199 --GAAAAGTTGTTTGCA--ATGTTCTCCATCACCATGCCATCGCTGCCTGCAAAGAAGCC 252254 |||| | | || | |||||| |||| || || || | || ||||| | Sbjct 12207 CTGAAACG----CTCCAACAGGTTCTCGTTCACAATACCGTCCGACGCGGCGAAGAACGC 12152 Query 252255 AAGAATGGTCTTGATGAAGTGACGCTCATCGTCGT---TGAGCTTGTCACGCCAGTCG-G 252310 ||| | ||| | | ||||||||||| | ||||| || | ||||| ||||||| | Sbjct 12151 AAGGACGGTACTCACAAAGTGACGCTCGTTGTCGTTCATGCGGTTGTC---CCAGTCGTG 12095 Query 252311 CAATGTCCTGATTCAGAGGAACTTCTTCCACCGTCCAGAATGTGGACACCGCCTTCTTGT 252370 ||| ||||| |||| || || || | |||||||| | || | | |||||||||| Sbjct 12094 CAA-GTCCTTCGACAGATCGACCTCCTCAGCGGTCCAGAACGAGGCCTCAGCCTTCTTGT 12036 Query 252371 ACATTGC 252377 |||| || Sbjct 12035 ACATCGC 12029 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027835601606531