Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20pachydermatis_20[genbank_20GCA_5F001278385.1_202015-09- 02] 91 sequences; 8,150,648 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq68 129 5e-25 seq1 107 2e-18 seq53 104 2e-17 >seq68 Length=564861 Score = 129 bits (142), Expect = 5e-25 Identities = 143/191 (75%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 114192 TCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAG 114251 || || || |||||||| ||||||| ||| || ||| || || || ||||||||| | Sbjct 517754 TCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCATCCTCCAGCTGCTTACCAGCGAAA 517813 Query 114252 ATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGT 114311 || ||||||||||||||||| |||||||| || ||||| ||||| || | | Sbjct 517814 ATAAGACGCTGTTGGTCCGGTGGAATGCCCTCCTTGTCCTGGATCTTAGCCTTGACGTTA 517873 Query 114312 TCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACA 114371 |||| ||||| | ||||||||| |||| || | ||||| || || ||||| || || Sbjct 517874 TCAATCGTGTCCGAGGATTCGACTTCCAATGTAATAGTTTTACCAGTAAGAGTCTTGACG 517933 Query 114372 AAAATCTGCAT 114382 ||||||||||| Sbjct 517934 AAAATCTGCAT 517944 Score = 111 bits (122), Expect = 1e-19 Identities = 139/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 114192 TCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAG 114251 || || ||||||||||| || |||| |||||| ||| || | || ||||||||| | Sbjct 517982 TCCTTCTGAATGTTGTAGTCACTCAAAGTACGGCCATCCTCCAACTGCTTACCAGCGAAA 518041 Query 114252 ATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGT 114311 || |||||||||||||| |||||||| ||||| ||||| ||||| || | | Sbjct 518042 ATAAGACGCTGTTGGTCGGGAGGAATACCTTCCTTGTCCTGGATCTTAGCCTTCACATTG 518101 Query 114312 TCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACA 114371 || | ||||| | || || || |||| ||| | ||| ||||| || ||||| || || Sbjct 518102 TCGATCGTGTCTGAAGACTCCACCTCCAGGGTGATCGTCTTGCCAGTAAGAGTCTTGACG 518161 Query 114372 AAAATCTGCAT 114382 || || ||||| Sbjct 518162 AAGATTTGCAT 518172 Score = 98.7 bits (108), Expect = 8e-16 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 114192 TCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAG 114251 || || || |||||||| ||||||| ||| || ||| || | || |||||||| || Sbjct 518210 TCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGCCCATCCTCCAACTGCTTACCAGCAAAG 518269 Query 114252 ATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGT 114311 || | || ||||||||||||||||| ||||| ||||| ||||| || | | Sbjct 518270 ATCAAGCGTTGTTGGTCCGGAGGAATACCTTCCTTGTCCTGGATCTTAGCCTTCACATTG 518329 Query 114312 TCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACA 114371 || | ||||| | || || || |||| ||| | ||| ||||| || || || || || Sbjct 518330 TCGATCGTGTCTGAAGACTCCACCTCCAGGGTGATCGTCTTGCCAGTGAGCGTCTTAACG 518389 Query 114372 AAAATCTGCATG 114383 ||||| |||||| Sbjct 518390 AAAATTTGCATG 518401 >seq1 Length=1489072 Score = 107 bits (118), Expect = 2e-18 Identities = 140/194 (72%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 114192 TCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAG 114251 || || || |||||||| ||||| | || || || || || || ||||||||| | Sbjct 830649 TCCTTCTGGATGTTGTAGTCGCTGAGGGTGCGGCCGTCCTCCAGCTGCTTACCAGCGAAA 830708 Query 114252 ATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGT 114311 |||||||||||||||||||||||||| || || ||||| ||||| || | | Sbjct 830709 ATGAGACGCTGTTGGTCCGGAGGAATACCCTCCTTGTCCTGGATCTTGGCCTTCACATTG 830768 Query 114312 TCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACA 114371 || | ||||| | ||| || || || | || | ||| ||||| |||||||| || || Sbjct 830769 TCGATCGTGTCCGAGGACTCAACCTCGAGCGTGATCGTCTTGCCAGTCAGAGTCTTGACG 830828 Query 114372 AAAATCTGCATGGC 114385 || || |||||||| Sbjct 830829 AAGATTTGCATGGC 830842 >seq53 Length=642545 Score = 104 bits (114), Expect = 2e-17 Identities = 162/232 (70%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 114155 ACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCT 114214 ||| ||||| || | || || | || | || || || || || |||||||| ||||| Sbjct 401348 ACCACCACGCAGGCGCAGCACCAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGCT 401289 Query 114215 CATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGG 114274 || || || ||| || || || ||||||||| |||| || ||||||||||||||||| Sbjct 401288 CAGGGTGCGGCCATCCTCGAGCTGCTTACCAGCGAAGATCAGGCGCTGTTGGTCCGGAGG 401229 Query 114275 AATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGAC 114334 ||| || || ||||| ||||| || | | || | ||||||| || || || Sbjct 401228 AATACCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATCGTGTCGGAAGACTCCAC 401169 Query 114335 GTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 114386 || | ||| | ||| || ||||| || || || || || | ||||| ||| Sbjct 401168 CTCAAGGGTGATCGTCTTCCCGGTGAGGGTCTTGACGAACACTTGCATAGCT 401117 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420133934044692