Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20pachydermatis_20[genbank_20GCA_5F001278385.1_202015-09- 02] 91 sequences; 8,150,648 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq11 342 1e-88 >seq11 Length=163833 Score = 342 bits (378), Expect = 1e-88 Identities = 609/872 (70%), Gaps = 44/872 (5%) Strand=Plus/Plus Query 42292 ACCAGGACATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGA 42351 |||| || |||||| | |||||||||||||| || ||| ||||||||| |||||| Sbjct 12015 ACCACGAGATCTGGGCGATGTACAAGAAGGCTGAGGCCTCGTTCTGGACCGCTGAGGAGG 12074 Query 42352 TTGACCTGGCCAAGGACACGGCCGGCTGGGAGTCACTGTCTGAGAACGAAAA-----GTT 42406 | || ||| | |||||| | || |||||| || | ||| |||| || || Sbjct 12075 TCGATCTGTCGAAGGACTTGCACGACTGGGACA-ACCGCATGA--ACGACAACGAGCGTC 12131 Query 42407 T-TTCCTCAAAAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACC 42465 || | | | | | || || ||||||||||| || ||||| || || || ||||||| Sbjct 12132 ACTTTGTGAGTACCGTCCTTGCGTTCTTCGCCGCGTCGGACGGTATTGTGAACGAGAACC 12191 Query 42466 TGGCCACCAGGTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCC 42525 || | |||| || || |||||| ||||| |||||||||||||| |||| Sbjct 12192 TGTTGGAGCGTTTCAGCAACGAAGTGCAGGTGGCGGAGGCTCGCTGCTTCTACGGTTTCC 12251 Query 42526 AGATAGCCATAGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCA---ACACGTACA 42582 |||| || |||||| | ||||| ||| ||| | ||||||| ||||||||| Sbjct 12252 AGATTATGATGGAGAACATTCACTCGGAGACCTACTCG---CTGCTCATCGACACGTACA 12308 Query 42583 TCCTGGATCCCGTCG-AGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATC 42641 ||| || | || || |||| | |||||||| || || ||||| || ||| | Sbjct 12309 TCCGCGA-CACGGCGCAGCGCGAGTACCTGTTCAACGCTATCGAGACCATTCCCGTTGTG 12367 Query 42642 AAGAAGAAGGCGGACTGGGCGCTCAACTGGATCGAGAGTCCCGAC-GCAACGTTCGGCGA 42700 ||| ||||||| || ||||| || |||||| | | | | | || ||||| || Sbjct 12368 AAGCAGAAGGCCGAGTGGGCCCTTCGCTGGATTGCG-GACAAGCGTGCCTCGTTCTCGGA 12426 Query 42701 GAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCAT 42760 | | || || || ||| ||||||| ||||||||||||||||||||| | || || || || Sbjct 12427 GCGCCTTGTGGCGTTTGCCGCCGTGGAGGGCATCTTCTTCTCGGGCTCGTTTGCGTCGAT 12486 Query 42761 CTTCTGGCTCAAGCAGAA-GGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCA 42819 ||||||||| ||| || ||| || ||||| || || | ||||||||||| || || | Sbjct 12487 CTTCTGGCTGAAGAAGCGTGGTCTC-ATGCCGGGTCTGTCGTTCTCGAACGAGCTTATTA 12545 Query 42820 GCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGC 42879 | | |||||||| ||||| | |||||||| ||| | |||||| || ||||| | | Sbjct 12546 CCCGTGACGAGGGTCTGCACACCGACTTTGCGTGCTTGCTGTTC---AGTCACCTGAAG- 12601 Query 42880 ACAAGCCCTCGAAG---GAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGA 42936 |||| |||| | || |||| |||||| || ||||| || |||||||| Sbjct 12602 --AAGCGCTCGCACCCTGACACGGTCAACCGCATCATTACCGAGGCTGTCTCGATCGAGA 12659 Query 42937 AGGAGTTCCTCACGCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAAC-CACGACCTCATG 42995 |||| || | ||| || | ||||| ||||| || |||||||||| | || | ||||| Sbjct 12660 AGGACTTTTTGACGGAGGCTCTGCCTGTGTCGCTTATCGGCATGAATGCTCGTC-TCATG 12718 Query 42996 TGCAAGTACATCCAGTACGTCGCCGACCATCTCCTGTGCCAGATGGGTCTCAGCCGCCT- 43054 ||| ||||||| ||| || ||||||| ||| ||| | | |||| || || Sbjct 12719 TGCCAGTACATTGAGTTTGTGGCCGACCGTCTGCTGGTC------GCTCTCGGCAACCCG 12772 Query 43055 -----CTACAACACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAG 43109 |||| || || || || || ||||||||||||||||||||| || |||||||| Sbjct 12773 AAGCACTACCACTCGACGAATCCATTTGACTTTATGGAGAACATCTCGCTGCAGGGCAAG 12832 Query 43110 ACCAACTTTTTCGAGAAGCGCGTCGCCGACTA 43141 | |||||||||||| || || |||||||| Sbjct 12833 TCGAACTTTTTCGAGCGTCGTGTGGCCGACTA 12864 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944338125814160