Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20pachydermatis_20[genbank_20GCA_5F001278385.1_202015-09- 02] 91 sequences; 8,150,648 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq40 114 3e-20 >seq40 Length=1303022 Score = 114 bits (126), Expect = 3e-20 Identities = 164/230 (71%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 334128 TCGGACCCGTCGAGATCGTGTTCCACGTAAGCAGTTTTCAAAACATCCGCAGAGGGGAAC 334187 || || |||||||| ||||| || ||||| || || | | || | || ||||| Sbjct 288410 TCCGAACCGTCGAGGTCGTGCTCGACGTACCAGGTCTTGACCTCCTCAGGCGACGGGAAG 288469 Query 334188 CCTTCAAGCTGACCGTTCACAATAGCGCGCATCAGAGTTGATTTACCCGCCCCGTTTGGC 334247 || || | |||||||||| || |||||||| || || || ||||||| || || | Sbjct 288470 CCCTCCACCTGACCGTTCTGGATGGCGCGCATAAGGGTCGACTTACCCGAACCATTACGA 288529 Query 334248 CCACACAGACCGTAGCGGTTTCCACGCTTCAGATTGAACCGCGTA---TTGTTCAGAAGA 334304 ||||| ||||||||||||| |||||||| ||| | | ||| ||||||| ||| Sbjct 288530 CCACAGAGACCGTAGCGGTGGCCACGCTTGAGA---CGCAGGGTAGCGGTGTTCAGCAGA 288586 Query 334305 ATTTTTCCACCATATGCCAGAGAAAATTCACAATCACACAGATCCTCACC 334354 || || |||| || || || || || | ||| | |||||| |||||||| Sbjct 288587 ATCTTAGCACCGTAGGCGAGCGAGAACTGACAGTTACACAGGTCCTCACC 288636 Score = 98.7 bits (108), Expect = 2e-15 Identities = 284/425 (67%), Gaps = 18/425 (4%) Strand=Plus/Plus Query 297437 GTGAAAATATATCGTGCACTCGCGTGATCCTTACCACCC-TGCAATCTCGAACCGAACTG 297495 |||||||| || || ||||| ||| ||||||||| ||| | | | | || ||| ||||| Sbjct 156833 GTGAAAATGTAACGCGCACTGGCGGCATCCTTACCGCCCATACTA-CGCGTACCAAACTG 156891 Query 297496 GCCCTCCGGCAACAACCAGTTGATGTTATTGCTTCCGACATAATCCTGTGCAAGGTTCAC 297555 || | |||| | | ||| | ||| ||||| || ||| ||||| || | || Sbjct 156892 ACCATTCGGCGAGAGAAGGTTCACGTTGTTGCTACCACAATAGTCCTGCGCCAACCCGAC 156951 Query 297556 GATGGTCCCTTGCAGAGATGCT--TCGCCATGGTGATAGGCGCTATGCTCTGCAACGTAA 297613 || ||| || ||| || ||||||||||| || || | || || | |||||| Sbjct 156952 AATCGTCA--TGACCAGACTCTGGTCGCCATGGTGGTACGCCGTGTGTTCCGAGACGTAA 157009 Query 297614 CCGCTGAACTG-TGCAACCTTCACGTCGGTCGTCAAATTGCGCTTGAAAGCTGAATATAT 297672 || | ||| ||| ||||| | || ||| ||||||||||||||||| | ||| | Sbjct 157010 CCTTGCAGCTGCTGC-ACCTTGATTTCCGTCTTCAAATTGCGCTTGAAACATCCATACAG 157068 Query 297673 CACTTTCCGTTGAGAAGGTTTGAAACCATCAACGACCGACGGAATGCTTCGTTCCAGATC 297732 |||||| || ||| || |||| |||||| || | ||||| || | | Sbjct 157069 CACTTTGCGCTGACCCGGCTTGAGACCATCCACCATACTGGGAATCGAGCG---AATGTT 157125 Query 297733 GTACCG----CGAGAACAAAATAAGTTCCTTGTCGATGAAGTCGGGAACGGGAACCTCGG 297788 || ||| |||||||| ||| | ||||||| ||| ||||| | || ||| | || | Sbjct 157126 GT-CCGCCATCGAGAACAGAATCAACTCCTTGTTGATAAAGTCAGAAATGGGGATCTGGC 157184 Query 297789 GCTTCTTGTGGTCAAGTTGATTTCCTGGTTCGTA-TGCCGTCATCCACTCCTTGCGATCC 297847 | || |||||| | | | || ||| || | ||||| || ||||||||| || || Sbjct 157185 GGATCCGGTGGTCCAAGTACGTGCCAGGTACGAACTGCCG-CAGCCACTCCTTTCGGTCG 157243 Query 297848 TCGGC 297852 || || Sbjct 157244 TCCGC 157248 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102878714110850