Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Malassezia_20pachydermatis_20[genbank_20GCA_5F001278385.1_202015-09-
02] 91 sequences; 8,150,648 total letters
Query= NC_009899.1
Length=344691
Score E
Sequences producing significant alignments: (Bits) Value
seq40 114 3e-20
>seq40
Length=1303022
Score = 114 bits (126), Expect = 3e-20
Identities = 164/230 (71%), Gaps = 6/230 (3%)
Strand=Plus/Plus
Query 334128 TCGGACCCGTCGAGATCGTGTTCCACGTAAGCAGTTTTCAAAACATCCGCAGAGGGGAAC 334187
|| || |||||||| ||||| || ||||| || || | | || | || |||||
Sbjct 288410 TCCGAACCGTCGAGGTCGTGCTCGACGTACCAGGTCTTGACCTCCTCAGGCGACGGGAAG 288469
Query 334188 CCTTCAAGCTGACCGTTCACAATAGCGCGCATCAGAGTTGATTTACCCGCCCCGTTTGGC 334247
|| || | |||||||||| || |||||||| || || || ||||||| || || |
Sbjct 288470 CCCTCCACCTGACCGTTCTGGATGGCGCGCATAAGGGTCGACTTACCCGAACCATTACGA 288529
Query 334248 CCACACAGACCGTAGCGGTTTCCACGCTTCAGATTGAACCGCGTA---TTGTTCAGAAGA 334304
||||| ||||||||||||| |||||||| ||| | | ||| ||||||| |||
Sbjct 288530 CCACAGAGACCGTAGCGGTGGCCACGCTTGAGA---CGCAGGGTAGCGGTGTTCAGCAGA 288586
Query 334305 ATTTTTCCACCATATGCCAGAGAAAATTCACAATCACACAGATCCTCACC 334354
|| || |||| || || || || || | ||| | |||||| ||||||||
Sbjct 288587 ATCTTAGCACCGTAGGCGAGCGAGAACTGACAGTTACACAGGTCCTCACC 288636
Score = 98.7 bits (108), Expect = 2e-15
Identities = 284/425 (67%), Gaps = 18/425 (4%)
Strand=Plus/Plus
Query 297437 GTGAAAATATATCGTGCACTCGCGTGATCCTTACCACCC-TGCAATCTCGAACCGAACTG 297495
|||||||| || || ||||| ||| ||||||||| ||| | | | | || ||| |||||
Sbjct 156833 GTGAAAATGTAACGCGCACTGGCGGCATCCTTACCGCCCATACTA-CGCGTACCAAACTG 156891
Query 297496 GCCCTCCGGCAACAACCAGTTGATGTTATTGCTTCCGACATAATCCTGTGCAAGGTTCAC 297555
|| | |||| | | ||| | ||| ||||| || ||| ||||| || | ||
Sbjct 156892 ACCATTCGGCGAGAGAAGGTTCACGTTGTTGCTACCACAATAGTCCTGCGCCAACCCGAC 156951
Query 297556 GATGGTCCCTTGCAGAGATGCT--TCGCCATGGTGATAGGCGCTATGCTCTGCAACGTAA 297613
|| ||| || ||| || ||||||||||| || || | || || | ||||||
Sbjct 156952 AATCGTCA--TGACCAGACTCTGGTCGCCATGGTGGTACGCCGTGTGTTCCGAGACGTAA 157009
Query 297614 CCGCTGAACTG-TGCAACCTTCACGTCGGTCGTCAAATTGCGCTTGAAAGCTGAATATAT 297672
|| | ||| ||| ||||| | || ||| ||||||||||||||||| | ||| |
Sbjct 157010 CCTTGCAGCTGCTGC-ACCTTGATTTCCGTCTTCAAATTGCGCTTGAAACATCCATACAG 157068
Query 297673 CACTTTCCGTTGAGAAGGTTTGAAACCATCAACGACCGACGGAATGCTTCGTTCCAGATC 297732
|||||| || ||| || |||| |||||| || | ||||| || | |
Sbjct 157069 CACTTTGCGCTGACCCGGCTTGAGACCATCCACCATACTGGGAATCGAGCG---AATGTT 157125
Query 297733 GTACCG----CGAGAACAAAATAAGTTCCTTGTCGATGAAGTCGGGAACGGGAACCTCGG 297788
|| ||| |||||||| ||| | ||||||| ||| ||||| | || ||| | || |
Sbjct 157126 GT-CCGCCATCGAGAACAGAATCAACTCCTTGTTGATAAAGTCAGAAATGGGGATCTGGC 157184
Query 297789 GCTTCTTGTGGTCAAGTTGATTTCCTGGTTCGTA-TGCCGTCATCCACTCCTTGCGATCC 297847
| || |||||| | | | || ||| || | ||||| || ||||||||| || ||
Sbjct 157185 GGATCCGGTGGTCCAAGTACGTGCCAGGTACGAACTGCCG-CAGCCACTCCTTTCGGTCG 157243
Query 297848 TCGGC 297852
|| ||
Sbjct 157244 TCCGC 157248
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1102878714110850
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |