Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20pachydermatis_20[genbank_20GCA_5F001278385.1_202015-09- 02] 91 sequences; 8,150,648 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq53 87.8 2e-12 seq11 84.2 2e-11 >seq53 Length=642545 Score = 87.8 bits (96), Expect = 2e-12 Identities = 89/115 (77%), Gaps = 1/115 (1%) Strand=Plus/Plus Query 64252 TTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATA 64311 ||||||||| ||||| || || || || ||| |||| || |||||||| |||||| | Sbjct 498969 TTCTTTTTGGATGTTATAGTCACTGAGTGTACGCCCGTCCTCTAGCTGCTTTCCGGCAAA 499028 Query 64312 AATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCtttttcttgtattttttgcttt 64366 || || ||||| || || ||||||||||| || || ||||| | | |||||||| Sbjct 499029 GATCAGACGCTGTTGATCCGGAGGAATTCCCTCCTTGTCTTG-AATCTTTGCTTT 499082 >seq11 Length=163833 Score = 84.2 bits (92), Expect = 2e-11 Identities = 121/168 (72%), Gaps = 2/168 (1%) Strand=Plus/Minus Query 132540 TATTCGCCCACTCGACGTTCGAAAAAGTTTGTCTTGCCCTCCAGCGATATGTTGTTCATG 132599 || ||| |||| ||||| ||||||||||| | |||||||| |||||| ||||| | ||| Sbjct 12864 TAGTCGGCCACACGACGCTCGAAAAAGTTCGACTTGCCCTGCAGCGAGATGTTCTCCATA 12805 Query 132600 AAATTAAAAGGATTGGGTGTGTTAAAATG-TTTGGGTTGTTGCAGCTCTGTAAGCAACCG 132658 || | ||| ||||| | | || | || || |||||| | || | |||| || Sbjct 12804 AAGTCAAATGGATTCGTCGAGTGGTAGTGCTTCGGGTTGCCG-AGAGCGACCAGCAGACG 12746 Query 132659 ATCCGCCACAAACTCGATATATTCGCACATGGCGCGCGAATTCATACC 132706 || ||||||||||| || || | ||||||| || | |||||| || Sbjct 12745 GTCGGCCACAAACTCAATGTACTGGCACATGAGACGAGCATTCATGCC 12698 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499644231654040