Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Malassezia_20pachydermatis_20[genbank_20GCA_5F001278385.1_202015-09-
02] 91 sequences; 8,150,648 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq11 167 2e-36
seq1 125 7e-24
seq68 118 1e-21
seq53 109 5e-19
>seq11
Length=163833
Score = 167 bits (184), Expect = 2e-36
Identities = 309/450 (69%), Gaps = 15/450 (3%)
Strand=Plus/Plus
Query 52395 GAGCGCATGGTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCCGGCAGCTTTGCCGCC 52454
|||||| | ||||| || ||| || |||||| | || || || ||| ||||| |
Sbjct 12425 GAGCGCCTTGTGGCGTTTGCCGCCGTGGAGGGCATCTTCTTCTCGGGCTCGTTTGCGTCG 12484
Query 52455 ATCTTTTACATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTCAGCAACGAGTTGATA 52514
||||| | | || | | || | ||||| || ||| ||||| |||||| | ||
Sbjct 12485 ATCTTCTGGCTGAAGAAGCGTGGTCTCATGCCGGGTCTGTCGTTCTCGAACGAGCTTATT 12544
Query 52515 TCGCGCGACGAAGGACTGCACACGGACTTTGCGTGCCTCTACTACAAGACGCGCGTGACC 52574
| || ||||| || |||||||| |||||||||||| | | || || |||
Sbjct 12545 ACCCGTGACGAGGGTCTGCACACCGACTTTGCGTGCTTGCTGTTCA--------GTCACC 12596
Query 52575 -GAAAAA----TTGGATTCGGACACGATCCTGAGCATGTTCAAGGAGGCGGTGGCTATCG 52629
||| || | | | | |||||| || |||| | | ||||| || | ||||
Sbjct 12597 TGAAGAAGCGCTCGCACCCTGACACGGTCAACCGCATCATTACCGAGGCTGTCTCGATCG 12656
Query 52630 AAAAGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGCATGAACGCGCAGTC-C 52688
| ||||| ||||| |||| || ||||| || ||| | |||||||| || | ||| |
Sbjct 12657 AGAAGGACTTTTTGACGGAGGCTCTGCCTGTGTCGCTTATCGGCATGAATGCTC-GTCTC 12715
Query 52689 ATGTGCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGGGCAGCCAAAG 52748
|||||| ||||||| ||||||||||| || |||||| |||| ||||| | || |||
Sbjct 12716 ATGTGCCAGTACATTGAGTTTGTGGCCGACCGTCTGCTGGTCGCTCTCGGCAACCCGAAG 12775
Query 52749 TACTTCAACGCTCGCAATCCGTTTGAGTTTATGAACAACATTTCGCTTGAGGGCAAGACC 52808
||| | || | ||||| ||||| |||||| | ||||| ||||| |||||||| |
Sbjct 12776 CACTACCACTCGACGAATCCATTTGACTTTATGGAGAACATCTCGCTGCAGGGCAAGTCG 12835
Query 52809 AACTTTTTCGAGAAGCGAGTCGGCGAGTAT 52838
|||||||||||| || || | ||| |||
Sbjct 12836 AACTTTTTCGAGCGTCGTGTGGCCGACTAT 12865
>seq1
Length=1489072
Score = 125 bits (138), Expect = 7e-24
Identities = 147/196 (75%), Gaps = 2/196 (1%)
Strand=Plus/Plus
Query 138423 CTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATA 138482
|||||| || |||||||||||||| | || || |||||| || || ||||| | |
Sbjct 830648 CTCCTTCTGGATGTTGTAGTCGCTGAGGGTGCGGCCGTCCTCCAGCTGCTTACCAGCGAA 830707
Query 138483 GATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATT 138541
|| |||||||||||||||||||| ||||| || ||||| ||| || || | |||
Sbjct 830708 AATGAGACGCTGTTGGTCCGGAGGAATACCCTCCTTGTCCTGGATCTTGGCCTTCACATT 830767
Query 138542 GTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTA 138601
| || | ||||| | ||||| ||||||| ||| | ||| || ||||||||||| || |
Sbjct 830768 G-TCGATCGTGTCCGAGGACTCAACCTCGAGCGTGATCGTCTTGCCAGTCAGAGTCTTGA 830826
Query 138602 CAAAAATCTGCATGGC 138617
| || || ||||||||
Sbjct 830827 CGAAGATTTGCATGGC 830842
>seq68
Length=564861
Score = 118 bits (130), Expect = 1e-21
Identities = 144/194 (74%), Gaps = 2/194 (1%)
Strand=Plus/Plus
Query 138423 CTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATA 138482
|||||| || |||||||||||||||| ||| ||| ||||| | || ||||| | | |
Sbjct 518209 CTCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGCCCATCCTCCAACTGCTTACCAGCAAA 518268
Query 138483 GATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATT 138541
||| | || |||||||||||||| |||||||| ||||| ||| || || | |||
Sbjct 518269 GATCAAGCGTTGTTGGTCCGGAGGAATACCTTCCTTGTCCTGGATCTTAGCCTTCACATT 518328
Query 138542 GTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTA 138601
| || | ||||| | ||||||||||| | || | ||| || ||||| || || || |
Sbjct 518329 G-TCGATCGTGTCTGAAGACTCCACCTCCAGGGTGATCGTCTTGCCAGTGAGCGTCTTAA 518387
Query 138602 CAAAAATCTGCATG 138615
| ||||| ||||||
Sbjct 518388 CGAAAATTTGCATG 518401
Score = 116 bits (128), Expect = 4e-21
Identities = 143/193 (74%), Gaps = 2/193 (1%)
Strand=Plus/Plus
Query 138423 CTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATA 138482
|||||| |||||||||||||| |||| |||||| ||||| | || ||||| | |
Sbjct 517981 CTCCTTCTGAATGTTGTAGTCACTCAAAGTACGGCCATCCTCCAACTGCTTACCAGCGAA 518040
Query 138483 GATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATT 138541
|| |||||||||||||| ||||| |||||||| ||||| ||| || || | |||
Sbjct 518041 AATAAGACGCTGTTGGTCGGGAGGAATACCTTCCTTGTCCTGGATCTTAGCCTTCACATT 518100
Query 138542 GTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTA 138601
| || | ||||| | ||||||||||| | || | ||| || ||||| ||||| || |
Sbjct 518101 G-TCGATCGTGTCTGAAGACTCCACCTCCAGGGTGATCGTCTTGCCAGTAAGAGTCTTGA 518159
Query 138602 CAAAAATCTGCAT 138614
| || || |||||
Sbjct 518160 CGAAGATTTGCAT 518172
Score = 104 bits (114), Expect = 2e-17
Identities = 138/192 (72%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 138423 CTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATA 138482
|||||| || |||||||||||||||| ||| || ||||| || || ||||| | |
Sbjct 517753 CTCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCATCCTCCAGCTGCTTACCAGCGAA 517812
Query 138483 GATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTG 138542
|| ||||||||||||||||| || || || || ||||| ||| || || | |
Sbjct 517813 AATAAGACGCTGTTGGTCCGGTGGAATGCCCTCCTTGTCCTGGATCTTAGCCTTGACGTT 517872
Query 138543 TTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTAC 138602
|| | ||||| | || || || || | || | ||||||||||| ||||| || ||
Sbjct 517873 ATCAATCGTGTCCGAGGATTCGACTTCCAATGTAATAGTTTTACCAGTAAGAGTCTTGAC 517932
Query 138603 AAAAATCTGCAT 138614
|||||||||||
Sbjct 517933 GAAAATCTGCAT 517944
>seq53
Length=642545
Score = 109 bits (120), Expect = 5e-19
Identities = 143/198 (72%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480
|||||||| || |||||||||||||||| || || |||||||| || ||||| |
Sbjct 401314 GACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTACCAGCG 401255
Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540
|||| || ||||||||||||||||| ||||| || ||||| ||| || || |
Sbjct 401254 AAGATCAGGCGCTGTTGGTCCGGAGGAATACCCTCCTTGTCCTGGATCTTGGCCTTCACA 401195
Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600
| || | ||||||| ||||||||||| | || | ||| || || || || || ||
Sbjct 401194 TTCTCGATCGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTCCCGGTGAGGGTCTTG 401135
Query 138601 ACAAAAATCTGCATGGCT 138618
|| || | ||||| |||
Sbjct 401134 ACGAACACTTGCATAGCT 401117
Score = 86.0 bits (94), Expect = 6e-12
Identities = 88/114 (77%), Gaps = 1/114 (1%)
Strand=Plus/Plus
Query 138424 TCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAG 138483
|| ||||| ||||| ||||| || | |||||| |||||| || || || |||| | ||
Sbjct 498970 TCTTTTTGGATGTTATAGTCACTGAGTGTACGCCCGTCCTCTAGCTGCTTTCCGGCAAAG 499029
Query 138484 ATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTT 138537
|| ||||||||||| |||||||| || || || ||||| ||| | |||| |||
Sbjct 499030 ATCAGACGCTGTTGATCCGGAGGAATTCCCTCCTTGTC-TTGAATCTTTGCTTT 499082
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496261835501520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |