Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20pachydermatis_20[genbank_20GCA_5F001278385.1_202015-09- 02] 91 sequences; 8,150,648 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq11 167 2e-36 seq1 125 7e-24 seq68 118 1e-21 seq53 109 5e-19 >seq11 Length=163833 Score = 167 bits (184), Expect = 2e-36 Identities = 309/450 (69%), Gaps = 15/450 (3%) Strand=Plus/Plus Query 52395 GAGCGCATGGTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCCGGCAGCTTTGCCGCC 52454 |||||| | ||||| || ||| || |||||| | || || || ||| ||||| | Sbjct 12425 GAGCGCCTTGTGGCGTTTGCCGCCGTGGAGGGCATCTTCTTCTCGGGCTCGTTTGCGTCG 12484 Query 52455 ATCTTTTACATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTCAGCAACGAGTTGATA 52514 ||||| | | || | | || | ||||| || ||| ||||| |||||| | || Sbjct 12485 ATCTTCTGGCTGAAGAAGCGTGGTCTCATGCCGGGTCTGTCGTTCTCGAACGAGCTTATT 12544 Query 52515 TCGCGCGACGAAGGACTGCACACGGACTTTGCGTGCCTCTACTACAAGACGCGCGTGACC 52574 | || ||||| || |||||||| |||||||||||| | | || || ||| Sbjct 12545 ACCCGTGACGAGGGTCTGCACACCGACTTTGCGTGCTTGCTGTTCA--------GTCACC 12596 Query 52575 -GAAAAA----TTGGATTCGGACACGATCCTGAGCATGTTCAAGGAGGCGGTGGCTATCG 52629 ||| || | | | | |||||| || |||| | | ||||| || | |||| Sbjct 12597 TGAAGAAGCGCTCGCACCCTGACACGGTCAACCGCATCATTACCGAGGCTGTCTCGATCG 12656 Query 52630 AAAAGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGCATGAACGCGCAGTC-C 52688 | ||||| ||||| |||| || ||||| || ||| | |||||||| || | ||| | Sbjct 12657 AGAAGGACTTTTTGACGGAGGCTCTGCCTGTGTCGCTTATCGGCATGAATGCTC-GTCTC 12715 Query 52689 ATGTGCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGGGCAGCCAAAG 52748 |||||| ||||||| ||||||||||| || |||||| |||| ||||| | || ||| Sbjct 12716 ATGTGCCAGTACATTGAGTTTGTGGCCGACCGTCTGCTGGTCGCTCTCGGCAACCCGAAG 12775 Query 52749 TACTTCAACGCTCGCAATCCGTTTGAGTTTATGAACAACATTTCGCTTGAGGGCAAGACC 52808 ||| | || | ||||| ||||| |||||| | ||||| ||||| |||||||| | Sbjct 12776 CACTACCACTCGACGAATCCATTTGACTTTATGGAGAACATCTCGCTGCAGGGCAAGTCG 12835 Query 52809 AACTTTTTCGAGAAGCGAGTCGGCGAGTAT 52838 |||||||||||| || || | ||| ||| Sbjct 12836 AACTTTTTCGAGCGTCGTGTGGCCGACTAT 12865 >seq1 Length=1489072 Score = 125 bits (138), Expect = 7e-24 Identities = 147/196 (75%), Gaps = 2/196 (1%) Strand=Plus/Plus Query 138423 CTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATA 138482 |||||| || |||||||||||||| | || || |||||| || || ||||| | | Sbjct 830648 CTCCTTCTGGATGTTGTAGTCGCTGAGGGTGCGGCCGTCCTCCAGCTGCTTACCAGCGAA 830707 Query 138483 GATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATT 138541 || |||||||||||||||||||| ||||| || ||||| ||| || || | ||| Sbjct 830708 AATGAGACGCTGTTGGTCCGGAGGAATACCCTCCTTGTCCTGGATCTTGGCCTTCACATT 830767 Query 138542 GTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTA 138601 | || | ||||| | ||||| ||||||| ||| | ||| || ||||||||||| || | Sbjct 830768 G-TCGATCGTGTCCGAGGACTCAACCTCGAGCGTGATCGTCTTGCCAGTCAGAGTCTTGA 830826 Query 138602 CAAAAATCTGCATGGC 138617 | || || |||||||| Sbjct 830827 CGAAGATTTGCATGGC 830842 >seq68 Length=564861 Score = 118 bits (130), Expect = 1e-21 Identities = 144/194 (74%), Gaps = 2/194 (1%) Strand=Plus/Plus Query 138423 CTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATA 138482 |||||| || |||||||||||||||| ||| ||| ||||| | || ||||| | | | Sbjct 518209 CTCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGCCCATCCTCCAACTGCTTACCAGCAAA 518268 Query 138483 GATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATT 138541 ||| | || |||||||||||||| |||||||| ||||| ||| || || | ||| Sbjct 518269 GATCAAGCGTTGTTGGTCCGGAGGAATACCTTCCTTGTCCTGGATCTTAGCCTTCACATT 518328 Query 138542 GTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTA 138601 | || | ||||| | ||||||||||| | || | ||| || ||||| || || || | Sbjct 518329 G-TCGATCGTGTCTGAAGACTCCACCTCCAGGGTGATCGTCTTGCCAGTGAGCGTCTTAA 518387 Query 138602 CAAAAATCTGCATG 138615 | ||||| |||||| Sbjct 518388 CGAAAATTTGCATG 518401 Score = 116 bits (128), Expect = 4e-21 Identities = 143/193 (74%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 138423 CTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATA 138482 |||||| |||||||||||||| |||| |||||| ||||| | || ||||| | | Sbjct 517981 CTCCTTCTGAATGTTGTAGTCACTCAAAGTACGGCCATCCTCCAACTGCTTACCAGCGAA 518040 Query 138483 GATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATT 138541 || |||||||||||||| ||||| |||||||| ||||| ||| || || | ||| Sbjct 518041 AATAAGACGCTGTTGGTCGGGAGGAATACCTTCCTTGTCCTGGATCTTAGCCTTCACATT 518100 Query 138542 GTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTA 138601 | || | ||||| | ||||||||||| | || | ||| || ||||| ||||| || | Sbjct 518101 G-TCGATCGTGTCTGAAGACTCCACCTCCAGGGTGATCGTCTTGCCAGTAAGAGTCTTGA 518159 Query 138602 CAAAAATCTGCAT 138614 | || || ||||| Sbjct 518160 CGAAGATTTGCAT 518172 Score = 104 bits (114), Expect = 2e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 138423 CTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATA 138482 |||||| || |||||||||||||||| ||| || ||||| || || ||||| | | Sbjct 517753 CTCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCATCCTCCAGCTGCTTACCAGCGAA 517812 Query 138483 GATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTG 138542 || ||||||||||||||||| || || || || ||||| ||| || || | | Sbjct 517813 AATAAGACGCTGTTGGTCCGGTGGAATGCCCTCCTTGTCCTGGATCTTAGCCTTGACGTT 517872 Query 138543 TTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTAC 138602 || | ||||| | || || || || | || | ||||||||||| ||||| || || Sbjct 517873 ATCAATCGTGTCCGAGGATTCGACTTCCAATGTAATAGTTTTACCAGTAAGAGTCTTGAC 517932 Query 138603 AAAAATCTGCAT 138614 ||||||||||| Sbjct 517933 GAAAATCTGCAT 517944 >seq53 Length=642545 Score = 109 bits (120), Expect = 5e-19 Identities = 143/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || |||||||||||||||| || || |||||||| || ||||| | Sbjct 401314 GACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTACCAGCG 401255 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| || ||||||||||||||||| ||||| || ||||| ||| || || | Sbjct 401254 AAGATCAGGCGCTGTTGGTCCGGAGGAATACCCTCCTTGTCCTGGATCTTGGCCTTCACA 401195 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | ||||||| ||||||||||| | || | ||| || || || || || || Sbjct 401194 TTCTCGATCGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTCCCGGTGAGGGTCTTG 401135 Query 138601 ACAAAAATCTGCATGGCT 138618 || || | ||||| ||| Sbjct 401134 ACGAACACTTGCATAGCT 401117 Score = 86.0 bits (94), Expect = 6e-12 Identities = 88/114 (77%), Gaps = 1/114 (1%) Strand=Plus/Plus Query 138424 TCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAG 138483 || ||||| ||||| ||||| || | |||||| |||||| || || || |||| | || Sbjct 498970 TCTTTTTGGATGTTATAGTCACTGAGTGTACGCCCGTCCTCTAGCTGCTTTCCGGCAAAG 499029 Query 138484 ATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTT 138537 || ||||||||||| |||||||| || || || ||||| ||| | |||| ||| Sbjct 499030 ATCAGACGCTGTTGATCCGGAGGAATTCCCTCCTTGTC-TTGAATCTTTGCTTT 499082 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496261835501520