Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20pachydermatis_20[genbank_20GCA_5F001278385.1_202015-09- 02] 91 sequences; 8,150,648 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq11 131 2e-25 seq53 111 1e-19 seq68 98.7 9e-16 seq1 95.1 1e-14 >seq11 Length=163833 Score = 131 bits (144), Expect = 2e-25 Identities = 357/541 (66%), Gaps = 17/541 (3%) Strand=Plus/Plus Query 47046 CTTTTGAACGGTTTCGAGAGCATGCCCTGCGTGC-GCAGAAAGGCCGAGTGGGCCATGAA 47104 || || |||| | |||||| ||| ||| ||| |||||| ||||||||||||| | Sbjct 12335 CTGTTCAACGCTATCGAGACCATTCCCGTTGTGAAGCAGAA-GGCCGAGTGGGCCCTTCG 12393 Query 47105 GTACATTGAAAACGAAAACGTCACTC--TGGCCGAACGTTTGATCGCTTTCGCCATCGTC 47162 | |||| || || ||| ||| | | || || | | || || ||| ||| Sbjct 12394 CTGGATTGCGGAC--AAGCGTGCCTCGTTCTCGGAGCGCCTTGTGGCGTTTGCCGCCGTG 12451 Query 47163 GAGGGCGTCTTCTTCTCGGGCAGCTTTGCGGCGATATTTTACATGAAAACCAAAGGAGTT 47222 |||||| |||||||||||||| |||||| |||| || | |||| | || | Sbjct 12452 GAGGGCATCTTCTTCTCGGGCTCGTTTGCGTCGATCTTCTGGCTGAAGAAGCGTGGTCTC 12511 Query 47223 ATGCCCGGCCTCACGTTTAGCAACGAGCTAATCTCGAGAGACGAAGGCCTGCACACCAAC 47282 ||||| || || |||| |||||||| || | | ||||| || ||||||||| || Sbjct 12512 ATGCCGGGTCTGTCGTTCTCGAACGAGCTTATTACCCGTGACGAGGGTCTGCACACCGAC 12571 Query 47283 TTTGCCTGTCTCTACTACAA-CACTAGAGTCGATCAAAAG---TTGGACGTGCCCACCGT 47338 ||||| || | | || ||| || | ||| | | || ||| || Sbjct 12572 TTTGCGTGCTTGCTGTTCAGTCACCTGA-------AGAAGCGCTCGCACCCTGACACGGT 12624 Query 47339 CAGCGACATGTTTGCCGAAGCCGTCGCCATTGAGATGGAGTTTTTCGCCGAGGCTCTGCC 47398 || | ||| || |||| || ||| | || |||| ||| ||||| | ||||||||||| Sbjct 12625 CAACCGCATCATTACCGAGGCTGTCTCGATCGAGAAGGACTTTTTGACGGAGGCTCTGCC 12684 Query 47399 CGAATCTTTAGTGGGAATGAACGCGGAGATGATGAGAAAGTACATCGAATTTGTCGCCGA 47458 | || | | || ||||| || | ||| | ||||||| || ||||| ||||| Sbjct 12685 TGTGTCGCTTATCGGCATGAATGCTCGTCTCATGTGCCAGTACATTGAGTTTGTGGCCGA 12744 Query 47459 CCGCCTGCTCGTTCAGCTAAAGTATCCCAAGATTTACCACACCGAGAATCCATTCGAGTT 47518 ||| ||||| || || | || ||| |||||| | ||||||||| || || Sbjct 12745 CCGTCTGCTGGTCGCTCTCGGCAACCCGAAGCACTACCACTCGACGAATCCATTTGACTT 12804 Query 47519 TATGAACAACATTTCGCTCGAGGGCAAGACCAACTTTTTCGAGAAGCGCGTCGGCGAATA 47578 |||| | ||||| ||||| |||||||| | |||||||||||| || || | ||| || Sbjct 12805 TATGGAGAACATCTCGCTGCAGGGCAAGTCGAACTTTTTCGAGCGTCGTGTGGCCGACTA 12864 Query 47579 T 47579 | Sbjct 12865 T 12865 >seq53 Length=642545 Score = 111 bits (122), Expect = 1e-19 Identities = 165/234 (71%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 126884 GCTCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCG 126943 || ||||| || | |||| ||||| || | || ||||| || || || ||||| ||| Sbjct 401350 GCACCACCACGCAGGCGCAGCACCAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCG 401291 Query 126944 CCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGA 127003 | || ||||| ||| || ||||| || |||||| |||||| ||||| || || ||| Sbjct 401290 CTCAGGGTGCGGCCATCCTCGAGCTGCTTACCAGCGAAGATCAGGCGCTGTTGGTCCGGA 401231 Query 127004 GGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCG 127063 || || |||||||||||| ||| || ||| | | |||| ||||| | | ||| Sbjct 401230 GGAATACCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATCGTGTCGGAAGACTCC 401171 Query 127064 ACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 127117 || || | ||| | ||| || ||||| || || || || || | ||||| ||| Sbjct 401170 ACCTCAAGGGTGATCGTCTTCCCGGTGAGGGTCTTGACGAACACTTGCATAGCT 401117 >seq68 Length=564861 Score = 98.7 bits (108), Expect = 9e-16 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 126922 CTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTA 126981 ||| || || || ||||| |||| || ||||| ||| || ||||| || |||||| | Sbjct 517753 CTCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCATCCTCCAGCTGCTTACCAGCGAA 517812 Query 126982 GATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTG 127041 || | ||||| || || || || ||||||||||||||| ||| || ||||| | Sbjct 517813 AATAAGACGCTGTTGGTCCGGTGGAATGCCCTCCTTGTCCTGGATCTTAGCCTTGACGTT 517872 Query 127042 TTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 127101 || | ||||||| |||||||| | || | ||||| || || ||||| || || Sbjct 517873 ATCAATCGTGTCCGAGGATTCGACTTCCAATGTAATAGTTTTACCAGTAAGAGTCTTGAC 517932 Query 127102 AAAAATCTGCAT 127113 ||||||||||| Sbjct 517933 GAAAATCTGCAT 517944 >seq1 Length=1489072 Score = 95.1 bits (104), Expect = 1e-14 Identities = 138/195 (71%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 126922 CTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTA 126981 ||| || || || ||||| |||| | ||||| || || ||||| || |||||| | Sbjct 830648 CTCCTTCTGGATGTTGTAGTCGCTGAGGGTGCGGCCGTCCTCCAGCTGCTTACCAGCGAA 830707 Query 126982 GATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTG 127041 || | ||||| || || ||||| || |||||||||||| ||| || ||| | | Sbjct 830708 AATGAGACGCTGTTGGTCCGGAGGAATACCCTCCTTGTCCTGGATCTTGGCCTTCACATT 830767 Query 127042 TTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 127101 |||| ||||||| ||| || |||| || | ||| ||||| |||||||| || || Sbjct 830768 GTCGATCGTGTCCGAGGACTCAACCTCGAGCGTGATCGTCTTGCCAGTCAGAGTCTTGAC 830827 Query 127102 AAAAATCTGCATGGC 127116 || || |||||||| Sbjct 830828 GAAGATTTGCATGGC 830842 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475500259117840