Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20pachydermatis_20[genbank_20GCA_5F001278385.1_202015-09- 02] 91 sequences; 8,150,648 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq11 343 1e-89 seq1 143 3e-29 seq68 127 2e-24 seq53 127 2e-24 >seq11 Length=163833 Score = 343 bits (380), Expect = 1e-89 Identities = 609/877 (69%), Gaps = 17/877 (2%) Strand=Plus/Minus Query 132627 CTCaaaaaaaTTAGTTTTTCCCTCCAAGGAAATGAGCGTCATAAAATCCAAGGGGTTGGC 132686 ||| ||||| || | || |||| || || ||| | |||||| || || || || | Sbjct 12847 CTCGAAAAAGTTCGACTTGCCCTGCAGCGAGATGTTCTCCATAAAGTCAAATGGATTCGT 12788 Query 132687 TGTGTTGTAGTGCTTGG---TGCCGATCAGGTCGACGAGCAGCCTGTCGGCCACGAACTC 132743 | || ||||||||| | |||||| || |||| ||||| | ||||||||| ||||| Sbjct 12787 CGAGTGGTAGTGCTTCGGGTTGCCGAG-AG--CGACCAGCAGACGGTCGGCCACAAACTC 12731 Query 132744 GATGTATTGCGACATG-GTTTCGCAATTAAGTCCCAGCAGACGCACCGGCAGCGCTTCGG 132802 ||||| || ||||| | ||| | | | || | || ||| ||||| || || | Sbjct 12730 AATGTACTGGCACATGAGACGAGCATTCATG-CCGATAAGCGACACAGGCAGAGCCTCCG 12672 Query 132803 TGAGAAAGCGTTGCTCGATGGCGACCGCGTCGGTGACGATTTCCCTAACGCGCGCCGCGC 132862 | | |||| | |||||| | ||| || ||||| | ||| | || || | | | Sbjct 12671 TCAAAAAGTCCTTCTCGATCGAGACAGCCTCGGTAATGATGCGGTTGAC-CGTGTCAGGG 12613 Query 132863 T-CGGCCGTTGCACCAAATGCTTGAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCG 132921 | || || | | || || |||||| |||||| ||||||||| |||| |||||| Sbjct 12612 TGCGAGCGCTTCTTCAGGTGACTGAACAGCAAGCACGCAAAGTCGGTGTGCAGACCCTCG 12553 Query 132922 TCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGC 132981 || | || ||| || ||||| ||| | || || |||||||| || || || || ||| Sbjct 12552 TCACGGGTAATAAGCTCGTTCGAGAACGACAGACCCGGCATGAGACCACGCTTCTTCAGC 12493 Query 132982 CAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCCACC 133041 || || || | || || |||||| ||||||| |||||| ||||| || || ||||| Sbjct 12492 CAGAAGATCGACGCAAACGAGCCCGAGAAGAAGATGCCCTCCACGGCGGCAAACGCCACA 12433 Query 133042 AGGCGCTCGCCGAACGTGGCTTCTTTGCTGGCGATCCAGCGCAGCGCCCATTCGGCCTTT 133101 |||||||| ||||| ||| ||| || |||||||| || ||||| |||||||| Sbjct 12432 AGGCGCTCCGAGAACGAGGCACGCTTGTCCGCAATCCAGCGAAGGGCCCACTCGGCCTTC 12373 Query 133102 TCTTTGACGCACGGCATCGTTTCGATGGCGTTCAACAAACGGAGTTTCTCTTC--CGAGG 133159 | || || || || || ||||| ||||| |||| | | | | || | || | Sbjct 12372 TGCTTCACAACGGGAATGGTCTCGATAGCGTTGAACAG--GTACTCGCGCTGCGCCGTGT 12315 Query 133160 AACGCACGTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGA 133219 || | ||| ||||||||||| ||| || | |||||||| | ||||||||| | Sbjct 12314 CGCGGATGTACGTGTCGATGAGCAGCGAGTAGGTCTCCGAGTGAATGTTCTCCATCATAA 12255 Query 133220 TTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGA 133279 | || || ||||| ||||| || ||||| ||||||||||||| | ||||||||| | Sbjct 12254 TCTGGAAACCGTAGAAGCAGCGAGCCTCCGCCACCTGCACTTCGTTGCTGAAACGCTCCA 12195 Query 133280 CCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGA 133339 ||| || ||||| || || ||||| |||||||| || || || ||| | | | Sbjct 12194 ACAGGTTCTCGTTCACAATACCGTCCGACGCGGCGAAGAACGCAAGGACGGTACTCACAA 12135 Query 133340 AATGGCGCTCGTTGTCGTTCAAGCG---CTCCCAGTCGCGCGTGTCCTTGGACAGGTCCA 133396 | || |||||||||||||||| ||| ||||||||| || |||||| ||||| || | Sbjct 12134 AGTGACGCTCGTTGTCGTTCATGCGGTTGTCCCAGTCGTGCAAGTCCTTCGACAGATCGA 12075 Query 133397 CCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTTTTGTACATACTCCACATGTCCGAAT 133456 ||||||| ||||||| ||||| ||||| || || |||||||| ||| || || | Sbjct 12074 CCTCCTCAGCGGTCCAGAACGAGGCCTCAGCCTTCTTGTACATCGCCCAGATCTCGTGGT 12015 Query 133457 ATTGTATGGGAAAAATCACAAACCGGCGGGGGTTTTC 133493 | | || || || | |||||| ||||| |||||| Sbjct 12014 AGCGGATCGGGAACAGCACAAAGCGGCGCTTGTTTTC 11978 >seq1 Length=1489072 Score = 143 bits (158), Expect = 3e-29 Identities = 163/216 (75%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || || || || ||||| || ||||| |||| || ||| || | Sbjct 830839 ATGCAAATCTTCGTCAAGACTCTGACTGGCAAGACGATCACGCTCGAGGTTGAGTCCTCG 830780 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | || | || |||| ||||| ||||| ||||| | |||||| Sbjct 830779 GACACGATCGACAATGTGAAGGCCAAGATCCAGGACAAGGAGGGTATTCCTCCGGACCAA 830720 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| ||||||| ||| || || |||||||| |||| |||||||||| |||||||||| Sbjct 830719 CAGCGTCTCATTTTCGCTGGTAAGCAGCTGGAGGACGGCCGCACCCTCAGCGACTACAAC 830660 Query 38424 ATCCAAAAGGA-AGCGACGCTGCATTTGGTGCTGCG 38458 ||||| ||||| ||| || || || ||||||| || Sbjct 830659 ATCCAGAAGGAGAGC-ACTCTTCACCTGGTGCTTCG 830625 >seq68 Length=564861 Score = 127 bits (140), Expect = 2e-24 Identities = 170/231 (74%), Gaps = 4/231 (2%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || || || || ||||| || || | || ||||| || | Sbjct 517944 ATGCAGATTTTCGTCAAGACTCTTACTGGTAAAACTATTACATTGGAAGTCGAATCCTCG 517885 Query 38304 GACA-GCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | || |||| | || | || |||| ||||| ||||| ||||| | ||||| Sbjct 517884 GACACGATTGATAACG-TCAAGGCTAAGATCCAGGACAAGGAGGGCATTCCACCGGACCA 517826 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 |||||| || |||| ||| || || |||||||| || | ||||| || | ||||||||| Sbjct 517825 ACAGCGTCTTATTTTCGCTGGTAAGCAGCTGGAGGATGGCCGCACTCTGAGCGACTACAA 517766 Query 38423 CATCCAAAAGGA-AGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGCC 38472 |||||| ||||| ||| |||||||| | || || ||| || | || |||| Sbjct 517765 CATCCAGAAGGAGAGC-ACGCTGCACCTTGTTCTCCGTCTGCGTGGTGGCC 517716 Score = 107 bits (118), Expect = 2e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || |||||||| ||||| || |||||| | || || ||| | | Sbjct 518400 ATGCAAATTTTCGTTAAGACGCTCACTGGCAAGACGATCACCCTGGAGGTGGAGTCTTCA 518341 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | || | || |||| ||||| || || ||||| | |||||| Sbjct 518340 GACACGATCGACAATGTGAAGGCTAAGATCCAGGACAAGGAAGGTATTCCTCCGGACCAA 518281 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 || || | || | || || || ||| |||| || | |||||| || | |||||||||| Sbjct 518280 CAACGCTTGATCTTTGCTGGTAAGCAGTTGGAGGATGGGCGCACTCTGAGCGACTACAAC 518221 Query 38424 ATCCAAAAGGA-AGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||| ||||| ||| || || || |||| || ||| || | || || Sbjct 518220 ATCCAGAAGGAGAGC-ACTCTTCACCTGGTTCTCCGTCTGCGCGGTGG 518174 Score = 104 bits (114), Expect = 2e-17 Identities = 154/216 (71%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || || || || ||||| || |||||| | || || ||| | | Sbjct 518172 ATGCAAATCTTCGTCAAGACTCTTACTGGCAAGACGATCACCCTGGAGGTGGAGTCTTCA 518113 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | || | || |||| ||||| || || ||||| |||||||| Sbjct 518112 GACACGATCGACAATGTGAAGGCTAAGATCCAGGACAAGGAAGGTATTCCTCCCGACCAA 518053 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| || |||| ||| || || ||| |||| || | || || | | ||||||||| Sbjct 518052 CAGCGTCTTATTTTCGCTGGTAAGCAGTTGGAGGATGGCCGTACTTTGAGTGACTACAAC 517993 Query 38424 ATCCAAAAGGA-AGCGACGCTGCATTTGGTGCTGCG 38458 || || ||||| ||| || || || |||||||| || Sbjct 517992 ATTCAGAAGGAGAGC-ACTCTTCACTTGGTGCTTCG 517958 >seq53 Length=642545 Score = 127 bits (140), Expect = 2e-24 Identities = 157/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||| | ||||| || || ||||| || || || |||||| | || || ||| | || Sbjct 401121 ATGCAAGTGTTCGTCAAGACCCTCACCGGGAAGACGATCACCCTTGAGGTGGAGTCTTCC 401180 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | || | || |||| ||||| ||||| ||||| | |||||| Sbjct 401181 GACACGATCGAGAATGTGAAGGCCAAGATCCAGGACAAGGAGGGTATTCCTCCGGACCAA 401240 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| || || | ||| || || ||||| || || | |||||||| | |||||||||| Sbjct 401241 CAGCGCCTGATCTTCGCTGGTAAGCAGCTCGAGGATGGCCGCACCCTGAGCGACTACAAC 401300 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 ||||| ||||| |||| || || |||||||||| Sbjct 401301 ATCCAGAAGGAGTCGACTCTTCACCTGGTGCTGCG 401335 Score = 95.1 bits (104), Expect = 1e-14 Identities = 103/137 (75%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 38322 AAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCG 38381 |||| ||| || | ||||| ||||||||||| | || |||||||| || || | || Sbjct 499082 AAAGCAAAGATTCAAGACAAGGAGGGAATTCCTCCGGATCAACAGCGTCTGATCTTTGCC 499023 Query 38382 GGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACG 38441 || || ||||| || |||| ||| || |||| ||||| ||||||||||| ||| || Sbjct 499022 GGAAAGCAGCTAGAGGACGGGCGTACACTCAGTGACTATAACATCCAAAAAGAAAGCACC 498963 Query 38442 CTGCATTTGGTGCTGCG 38458 ||||| |||| ||||| Sbjct 498962 CTGCACCTGGTACTGCG 498946 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500172231053440