Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20pachydermatis_20[genbank_20GCA_5F001278385.1_202015-09- 02] 91 sequences; 8,150,648 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq40 114 2e-20 seq11 109 7e-19 >seq40 Length=1303022 Score = 114 bits (126), Expect = 2e-20 Identities = 284/428 (66%), Gaps = 6/428 (1%) Strand=Plus/Plus Query 175841 CCCGTACCGATACCCTCTGTACCGTTCACGAGAACCATGGGGAGTGTTGGCATGTAGAAG 175900 |||||||| |||||||| | || |||| || || |||| |||| ||| | Sbjct 156680 CCCGTACCAATACCCTCCGCTCCATTCAAAAGCACTTGCGGGACGACAGGCACGTACCAT 156739 Query 175901 TCTGGCTCAATGGGGCGACCATCGTCATCCAAATAGTTGAGAATTGGATCATCTCTCGGA 175960 || |||||||| | |||||||| ||||| ||||| || | | ||||||| ||||| Sbjct 156740 TCCGGCTCAATACTCTGGCCATCGTCGTCCAAGTAGTTCAGCAACGCATCATCTTTCGGA 156799 Query 175961 TCAAAGATCTTTCGGGCATCTTTTGTGAGCTTTGTAAAGATATACCTCGTTTGAGACGCA 176020 | || | ||| || | | || | | || || || || | || | ||| Sbjct 156800 TGGAAAAGCTTGCGTGTAATACGTGGCACCGCCGTGAAAATGTAACGCGCACTGGCGGCA 156859 Query 176021 TCCTTACCACCCATGAGACGCGTACCAAACTGACCACACGGCTCAAGAAGATTGATATTG 176080 |||||||| ||||| ||||||||||||||||||| |||| ||||| || | ||| Sbjct 156860 TCCTTACCGCCCATACTACGCGTACCAAACTGACCATTCGGCGAGAGAAGGTTCACGTTG 156919 Query 176081 TTTGAACCCATGTAGTCATTCGCCAACTTGACAATCGTGTCCGCGA-GAGAGACT--TCA 176137 || ||| ||||| | ||||||| ||||||||| | || ||| || || Sbjct 156920 TTGCTACCACAATAGTCCTGCGCCAACCCGACAATCGT---CATGACCAGACTCTGGTCG 156976 Query 176138 CCGTGGTGGTACGCACTCTTCTCTGCGACAAATGCCGCCAACTGCGCCACTTTCATCTCA 176197 || ||||||||||| | | || | ||| | | || |||| ||| || || || Sbjct 156977 CCATGGTGGTACGCCGTGTGTTCCGAGACGTAACCTTGCAGCTGCTGCACCTTGATTTCC 157036 Query 176198 TCCTTGAGATTCTTGTGGAAACATGCGTACATAACCTTGCGTTGCGAAGGCTTGAGACCA 176257 ||| | ||| | ||||||| | |||| || ||||| || |||||||||||| Sbjct 157037 GTCTTCAAATTGCGCTTGAAACATCCATACAGCACTTTGCGCTGACCCGGCTTGAGACCA 157096 Query 176258 TCCGCCAT 176265 ||| |||| Sbjct 157097 TCCACCAT 157104 >seq11 Length=163833 Score = 109 bits (120), Expect = 7e-19 Identities = 118/154 (77%), Gaps = 2/154 (1%) Strand=Plus/Plus Query 102180 GAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCG-C 102238 ||||| || | || ||||| || ||||| ||||||||||| || || || |||| | Sbjct 12425 GAGCGCCTTGTGGCGTTTGCCGCCGTGGAGGGCATCTTCTTCTCGGGCTCGTT-TGCGTC 12483 Query 102239 TATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTAT 102298 || | ||||| |||||||| ||||||||||| ||||| | ||||| ||||||||||| Sbjct 12484 GATCTTCTGGCTGAAGAAGCGTGGTCTCATGCCGGGTCTGTCGTTCTCGAACGAGCTTAT 12543 Query 102299 CTCTCGTGACGAGGGACTCCACCAAGAGTTTGCG 102332 | ||||||||||| || ||| || |||||| Sbjct 12544 TACCCGTGACGAGGGTCTGCACACCGACTTTGCG 12577 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620741693905520