Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20pachydermatis_20[genbank_20GCA_5F001278385.1_202015-09- 02] 91 sequences; 8,150,648 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq40 127 2e-24 seq11 120 4e-22 >seq40 Length=1303022 Score = 127 bits (140), Expect = 2e-24 Identities = 299/444 (67%), Gaps = 8/444 (2%) Strand=Plus/Plus Query 168291 CCCGTACCGATACCTTCGGTTCCATTCACGAGAACCATTGGTATGGTTGGCATGTAAAAG 168350 |||||||| ||||| || | |||||||| || || || | | |||| ||| | Sbjct 156680 CCCGTACCAATACCCTCCGCTCCATTCAAAAGCACTTGCGGGACGACAGGCACGTACCAT 156739 Query 168351 TCTGGTTCAATTGAGCGCCCATCATCATCCAAGTAGTTGAGGATCGGGTCATCCCGAGGA 168410 || || ||||| | ||||| || ||||||||||| || | || ||||| ||| Sbjct 156740 TCCGGCTCAATACTCTGGCCATCGTCGTCCAAGTAGTTCAGCAACGCATCATCTTTCGGA 156799 Query 168411 TCAAAGATCTTGCGAGCC-TCTTTGGTAAGTTTTGTGAAAATGTACCTCGT-CTGAGAAG 168468 | || | |||||| | | ||| | ||||||||||| | || ||| | | Sbjct 156800 TGGAAAAGCTTGCGTGTAATACGTGGCACCGCC-GTGAAAATGTAACGCGCACTG-GCGG 156857 Query 168469 CATCCTTACCACCCATGAGACGCGTACCAAATTGACCACACGGTTCAAGAAGGTTAATGT 168528 |||||||||| ||||| |||||||||||| |||||| ||| |||||||| | || Sbjct 156858 CATCCTTACCGCCCATACTACGCGTACCAAACTGACCATTCGGCGAGAGAAGGTTCACGT 156917 Query 168529 TGTTTGAACCCGTGTAGTCGTTTGCCAACTTAACAATCGTGTCCGCTAAGGATACT--TC 168586 |||| ||| ||||| | |||||| |||||||| | | || || || Sbjct 156918 TGTTGCTACCACAATAGTCCTGCGCCAACCCGACAATCGTCATGACCA--GACTCTGGTC 156975 Query 168587 ACCATGGTGGTACGCAGACTTGTCCGCGACATATGCCGCCAGTTGTGCCACCTTCATTTC 168646 |||||||||||||| | | |||| ||| || | ||| || |||||| ||||| Sbjct 156976 GCCATGGTGGTACGCCGTGTGTTCCGAGACGTAACCTTGCAGCTGCTGCACCTTGATTTC 157035 Query 168647 ATCCTTGAGATTCTTATGGAAGCAAGCATACATCACTTTCCTCTGTGAAGGCTTGAGACC 168706 ||| | ||| | ||| || |||||| |||||| | ||| ||||||||||| Sbjct 157036 CGTCTTCAAATTGCGCTTGAAACATCCATACAGCACTTTGCGCTGACCCGGCTTGAGACC 157095 Query 168707 ATCCGCCATATGGGCAATAGAGCG 168730 |||| ||||| || ||| ||||| Sbjct 157096 ATCCACCATACTGGGAATCGAGCG 157119 >seq11 Length=163833 Score = 120 bits (132), Expect = 4e-22 Identities = 126/163 (77%), Gaps = 2/163 (1%) Strand=Plus/Minus Query 117274 GCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCT 117333 ||||| || ||| |||||||| || |||| |||||| || || ||||| | || || Sbjct 12576 GCAAAGTCGGTGTGCAGACCCTCGTCACGGGTAATAAGCTCGTTCGAGAACGACAGACCC 12517 Query 117334 GGCATGAGACCCCGCTTCTTCAACCAATAAATAG-CGCAGAATGACCCGGAGAAGAAGAT 117392 ||||||||||| |||||||||| ||| | || | |||| || || || ||||||||||| Sbjct 12516 GGCATGAGACCACGCTTCTTCAGCCAGAAGATCGACGCA-AACGAGCCCGAGAAGAAGAT 12458 Query 117393 ACCCTCCACACACGCAAACGCAAAAAGGCGCTCGGCGAAGGAG 117435 |||||||| |||||||| | ||||||||| | ||| ||| Sbjct 12457 GCCCTCCACGGCGGCAAACGCCACAAGGCGCTCCGAGAACGAG 12415 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589980128896840