Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20pachydermatis_20[genbank_20GCA_5F001278385.1_202015-09- 02] 91 sequences; 8,150,648 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq74 93.3 3e-13 seq68 87.8 1e-11 >seq74 Length=362120 Score = 93.3 bits (102), Expect = 3e-13 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 550400 GCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCT 550459 || || || ||||| || || || || || ||||| || ||||| ||||| || |||||| Sbjct 138435 GCCGTCATCACTGTGCCTGCCTACTTCAACGACTCTCAGCGTCAGGCTACCAAGGATGCT 138376 Query 550460 GGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTT 550519 || |||||| || ||| | || || ||| | ||||| || || ||||||||||| ||| Sbjct 138375 GGTACTATTGCCGGTCTTGAAGTGCTGCGTGTGATCAACGAGCCGACTGCTGCTGCGCTT 138316 Query 550520 GCATATGGACTTGA 550533 || || || || || Sbjct 138315 GCCTACGGTCTGGA 138302 >seq68 Length=564861 Score = 87.8 bits (96), Expect = 1e-11 Identities = 155/221 (70%), Gaps = 4/221 (2%) Strand=Plus/Plus Query 563257 AGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCT-AGAGTTCT 563315 |||||||| ||||| || || || || || || || ||||| || ||| ||||| | Sbjct 517727 AGACGGAGAACAAGGTGCAGCGTGCTCTCCTTCTGGATGTTGTAGTC-GCTCAGAGTGCG 517785 Query 563316 TGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTC 563375 ||| || || || || || || |||||||| | || || || || ||||| || || Sbjct 517786 GCCATCCTCCAGCTGCTTACCAGCGAAAATAAGACGCTGTTGGTCCGGTGGAATGCCCTC 517845 Query 563376 TTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGAGAG 563434 || || || || || || || ||||| || || | | || | | ||| | | Sbjct 517846 CTTGTCCTGGATCTTAGCCTTGACGTTATCAATCGTGTCCGAG-GATTCGACTTCCAATG 517904 Query 563435 TAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 ||| |||||||||||||||||| || |||||||| |||||| Sbjct 517905 TAATAGTTTTACCAGTAAGAGTCTTGACGAAAATCTGCATA 517945 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029291187509590