Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20pachydermatis_20[genbank_20GCA_5F001278385.1_202015-09- 02] 91 sequences; 8,150,648 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq68 100 2e-16 seq53 96.9 3e-15 seq1 93.3 3e-14 >seq68 Length=564861 Score = 100 bits (110), Expect = 2e-16 Identities = 153/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || || | |||||| || || |||||||| || ||||| ||||| ||| | | | || Sbjct 517955 AGGCGAAGCACCAAGTGAAGAGTGCTCTCCTTCTGAATGTTGTAGTCACTCAAAGTACGG 518014 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 | || |||||||||||||| || || || || |||||||| || | |||| || ||| Sbjct 518015 CCATCCTCCAACTGCTTACCAGCGAAAATAAGACGCTGTTGGTCGGGAGGAATACCTTCC 518074 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| ||||| || ||| | | | ||||| | ||||||||||| || Sbjct 518075 TTGTCCTGGATCTTAGCCTTCACATTGTCGATCGTGTCTGAAGACTCCACCTCCAGGGTG 518134 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 ||||| || || || | ||| || || || || ||||| Sbjct 518135 ATCGTCTTGCCAGTAAGAGTCTTGACGAAGATTTGCAT 518172 Score = 96.9 bits (106), Expect = 3e-15 Identities = 143/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 48564 TGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGC 48623 || ||||||||||| || || || ||||| || ||| | || | || |||| |||| Sbjct 517742 TGCAGCGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCATCCTCCAGCTGC 517801 Query 48624 TTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTT 48683 ||||| || || || || |||||||| |||| |||| |||||||||||| ||||| Sbjct 517802 TTACCAGCGAAAATAAGACGCTGTTGGTCCGGTGGAATGCCCTCCTTGTCCTGGATCTTA 517861 Query 48684 TGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTC 48743 || || | | | | || || | || || |||| ||||| ||||| || || Sbjct 517862 GCCTTGACGTTATCAATCGTGTCCGAGGATTCGACTTCCAATGTAATAGTTTTACCAGTA 517921 Query 48744 AAAGTTTTTACAAAAATCTGCAT 48766 | ||| || || ||||||||||| Sbjct 517922 AGAGTCTTGACGAAAATCTGCAT 517944 Score = 93.3 bits (102), Expect = 3e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 48558 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCC 48617 |||| || || |||||||| || || || ||||| || ||| | || | || ||| Sbjct 518192 ACCAGGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGCCCATCCTCC 518251 Query 48618 AACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTA 48677 ||||||||||| ||||| |||| || ||||| |||| |||| || |||||||| Sbjct 518252 AACTGCTTACCAGCAAAGATCAAGCGTTGTTGGTCCGGAGGAATACCTTCCTTGTCCTGG 518311 Query 48678 ATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTT 48737 ||||| || ||| | | | ||||| | ||||||||||| || ||||| || Sbjct 518312 ATCTTAGCCTTCACATTGTCGATCGTGTCTGAAGACTCCACCTCCAGGGTGATCGTCTTG 518371 Query 48738 CCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || | || || || ||||| ||||| Sbjct 518372 CCAGTGAGCGTCTTAACGAAAATTTGCAT 518400 >seq53 Length=642545 Score = 96.9 bits (106), Expect = 3e-15 Identities = 107/143 (75%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || |||| |||| || || ||||| |||||||| || || || ||| || | || Sbjct 498943 AGGCGCAGTACCAGGTGCAGGGTGCTTTCTTTTTGGATGTTATAGTCACTGAGTGTACGC 499002 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 |||| || | |||||| |||||||| ||||| ||||||||||||| |||| |||||| Sbjct 499003 CCGTCCTCTAGCTGCTTTCCGGCAAAGATCAGACGCTGTTGATCCGGAGGAATTCCCTCC 499062 Query 48669 TTGTCGCTAATCTTTTGTTTTAC 48691 ||||| ||||||| ||| || Sbjct 499063 TTGTCTTGAATCTTTGCTTTGAC 499085 >seq1 Length=1489072 Score = 93.3 bits (102), Expect = 3e-14 Identities = 150/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 48551 CCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATC 48610 ||| | ||||| || || |||||||| || || || ||||| || || | || | Sbjct 830624 CCGAAGCACCAGGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTGAGGGTGCGGCC 830683 Query 48611 GTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTT 48670 ||| |||| ||||||||| || || || || |||||||| |||| |||| |||||||| Sbjct 830684 GTCCTCCAGCTGCTTACCAGCGAAAATGAGACGCTGTTGGTCCGGAGGAATACCCTCCTT 830743 Query 48671 GTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAAT 48730 ||| ||||| || ||| | | | || || | ||| ||||| | ||| || Sbjct 830744 GTCCTGGATCTTGGCCTTCACATTGTCGATCGTGTCCGAGGACTCAACCTCGAGCGTGAT 830803 Query 48731 CGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 ||| || || |||| ||| || || || || ||||| Sbjct 830804 CGTCTTGCCAGTCAGAGTCTTGACGAAGATTTGCAT 830839 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380937177516393