Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20pachydermatis_20[genbank_20GCA_5F001278385.1_202015-09- 02] 91 sequences; 8,150,648 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq11 226 5e-54 >seq11 Length=163833 Score = 226 bits (250), Expect = 5e-54 Identities = 572/859 (67%), Gaps = 28/859 (3%) Strand=Plus/Minus Query 47843 TAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTCCATG 47902 ||||| |||| | | ||| || ||||| | ||| |||| || ||||||||||||||| Sbjct 12864 TAGTCGGCCACACGACGCTCGAAAAAGTTCGACTTGCCCTGCAGCGAGATGTTCTCCATA 12805 Query 47903 AAGAGGAAGGGGTTGGGTGTGTTATACACC--CGTGTCAGGCCCATCTGTTCCAGCAGGT 47960 ||| || || || | | || || | || || ||| | ||||||| Sbjct 12804 AAGTCAAATGGATTCGTCGAGTGGTAGTGCTTCGGGTT--GCCGAGAGCGACCAGCAGAC 12747 Query 47961 GATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGGACA 48020 | || || || |||| ||||| | ||||||| |||||||| || || |||| Sbjct 12746 GGTCGGCCACAAACTCAATGTACTGGCACATGAGACGAGCATTCATGCCGATAAGCGACA 12687 Query 48021 CGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCTGCT 48080 | |||| ||||| || | ||| |||||||| ||| || || || | || | | Sbjct 12686 CAGGCAGAGCCTCCGTCAAAAAGTCCTTCTCGATCGAGACAGCCTCGGTAATGATGCGGT 12627 Query 48081 TAACGCGGGAC----TCTGAGGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAGGCA 48136 | || || | | | ||| | || || |||||| || | |||| ||| ||| Sbjct 12626 TGAC-CGTGTCAGGGTGCGAGCGCTTCTT---CAGGTGACTGA---ACAGCAAGCACGCA 12574 Query 48137 AAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGC 48196 ||||| |||||| || ||||| ||| | || ||| |||| ||||| | ||||| ||| Sbjct 12573 AAGTCGGTGTGCAGACCCTCGTCACGGGTAATAAGCTCGTTCGAGAACGACAGACCCGGC 12514 Query 48197 ATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCC 48256 |||| || | || || |||||||| || | ||| || ||||| ||||||||||||||| Sbjct 12513 ATGAGACCACGCTTCTTCAGCCAGAAGATCGACGCAAACGAGCCCGAGAAGAAGATGCCC 12454 Query 48257 TCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATCCAG 48316 ||||| || || ||||| || | ||| ||| || || |||||| | |||||| Sbjct 12453 TCCACGGCGGCAAACGCCACAAGGCGCTCCGAGAACGAGGCACGCTTGTCCGCAATCCAG 12394 Query 48317 GAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAAGAGC 48376 ||| ||||| || ||||||| ||| | || || ||||| || || ||| || Sbjct 12393 CGAAGGGCCCACTCGGCCTTCTGCTTCACAACGGGAATGGTCTCGATAGCGTTGAACAGG 12334 Query 48377 TTCTTGCACTCACCTGCGTC-CGCA---ACATAGGTAG-TGAGCAGCTTTGCGTACATCT 48431 | || || || | | ||| || | || | || | |||||||| | ||| ||| Sbjct 12333 TACTCGCGCTGCGCCGTGTCGCGGATGTACGT--GTCGATGAGCAGC---GAGTAGGTCT 12279 Query 48432 CAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACCT 48491 | ||||| | ||||| || |||||||| ||||||||| | ||||| ||||| Sbjct 12278 CCGAGTGAATGTTCTCCATCATAATCTGGAAACCGTAGAAGCAGCGAGCCTCCGCCACCT 12219 Query 48492 GCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAGCAA 48551 ||||||| || ||| | ||||| ||| ||||| || || || || || || || || | Sbjct 12218 GCACTTCGTTGCTGAAACGCTCCAACAGGTTCTCGTTCACAATACCGTCCGACGCGGCGA 12159 Query 48552 AGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGG---GTGAGAGCATTCCAGC 48608 |||| |||||||| | | || || |||||||||| | || | | |||| Sbjct 12158 AGAACGCAAGGACGGTACTCACAAAGTGACGCTCGTTGTCGTTCATGCGGTTGTCCCAGT 12099 Query 48609 CCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGCTTTTT 48668 | || | ||| || ||| || || || || | |||||||| || || || || | Sbjct 12098 CGTGCAAGTCCTTCGACAGATCGACCTCCTCAGCGGTCCAGAACGAGGCCTCAGCCTTCT 12039 Query 48669 TGTACATGCCCCATATGTC 48687 ||||||| |||| || || Sbjct 12038 TGTACATCGCCCAGATCTC 12020 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931531740381440