Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20pachydermatis_20[genbank_20GCA_5F001278385.1_202015-09- 02] 91 sequences; 8,150,648 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq11 237 3e-57 >seq11 Length=163833 Score = 237 bits (262), Expect = 3e-57 Identities = 557/840 (66%), Gaps = 26/840 (3%) Strand=Plus/Plus Query 25474 GATATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGAT 25533 || || |||| |||||||||||||||| | ||| ||||||||| || ||| | ||| Sbjct 12020 GAGATCTGGGCGATGTACAAGAAGGCTGAGGCCTCGTTCTGGACCGCTGAGGAGGTCGAT 12079 Query 25534 CTGGCCAAGGACATGGACGGCTGGTAC----GCTCTATCCAAAGACGAGCAGCATTTTCT 25589 ||| | |||||| || ||| |||| || || | | | | |||||| || ||| | Sbjct 12080 CTGTCGAAGGACTTGCACGACTGGGACAACCGCATGAACGACA-ACGAGCGTCACTTTGT 12138 Query 25590 CAAGTAC-GTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCG 25648 | |||| || | || ||||| || || || || ||||| ||||||||||| |||| | Sbjct 12139 GA-GTACCGTCCTTGCGTTCTTCGCCGCGTCGGACGGTATTGTGAACGAGAACCTGTTGG 12197 Query 25649 AGAGATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGG 25708 || | |||| || ||||||||| | |||||| || ||||||||||||||||| Sbjct 12198 AGCGTTTCAGCAACGAAGTGCAGGTGGCGGAGGCTCGCTGCTTCTACGGTTTCCAGATTA 12257 Query 25709 CCATCGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATG---ACGTACATTACAG 25765 || || || | ||||| ||| || | ||| || || |||||||| | Sbjct 12258 TGATGGAGAACATTCACTCGGAGACCTACTC---GCTGCTCATCGACACGTACATCCGCG 12314 Query 25766 AC--GTCGCCGAGAGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAG 25823 || | ||| | | ||| | ||||| || |||||| ||| ||| | ||| Sbjct 12315 ACACGGCGCAGCGCGAGTAC--CTGTTCAACGCTATCGAGACCATTCCCGTTGTGAAGCA 12372 Query 25824 GAAGGCGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCT 25883 |||||| ||||||| | ||||| | || | || |||| ||||| || Sbjct 12373 GAAGGCCGAGTGGGCCCTTCGCTGGATTGCGGACAAGCGTGCCTCGTTCTCGGAGCGCCT 12432 Query 25884 GGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTG 25943 || || ||||| || |||||||||||||| ||| || ||||||||| | |||||||| Sbjct 12433 TGTGGCGTTTGCCGCCGTGGAGGGCATCTTCTTCTCGGGCTCGTTTGCGTCGATCTTCTG 12492 Query 25944 GCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGA 26003 ||| ||| || || |||||| || |||| || || |||||||| || | | | || Sbjct 12493 GCTGAAGAAGCGTGGTCTCATGCCGGGTCTGTCGTTCTCGAACGAGCTTATTACCCGTGA 12552 Query 26004 CGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCACAAACC 26063 ||||||||| |||| || ||||| ||| |||| | || | ||| || | || | Sbjct 12553 CGAGGGTCTGCACACCGACTTTGCGTGCTTGCTGTTCA---GTCAC---CTGAAGAAGCG 12606 Query 26064 TTCTCA---AGAGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAGGAGTT 26120 || || || || ||| || | ||||| | |||||||| |||||||||||| || Sbjct 12607 CTCGCACCCTGACACGGTCAACCGCATCATTACCGAGGCTGTCTCGATCGAGAAGGACTT 12666 Query 26121 TCNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGACTCATGAGCCAATA 26180 | | |||||||| | |||||| |||| || Sbjct 12667 TTTGACGGAGGCTCTGCCTGTGTCGCTTATCGGCATGAATGCTCGTCTCATGTGCCAGTA 12726 Query 26181 CATTGAGTATGTGGCCGACCATCTGCTGTGCCAGCTGGGACTCGCCAGACTCTACAGTAC 26240 |||||||| ||||||||||| ||||||| | || || | | | | |||| | Sbjct 12727 CATTGAGTTTGTGGCCGACCGTCTGCTGGTCGCTCTCGGCAACCCGAAGCACTACCACTC 12786 Query 26241 GCCTAACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAACTTCTTTGA 26300 | | || || || ||||||||||| ||||| ||| || | || ||| | ||||| || || Sbjct 12787 GACGAATCCATTTGACTTTATGGAGAACATCTCGCTGCAGGGCAAGTCGAACTTTTTCGA 12846 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928843743439040