Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Malassezia_20pachydermatis_20[genbank_20GCA_5F001278385.1_202015-09-
02] 91 sequences; 8,150,648 total letters
Query= NC_020104.1
Length=1021348
Score E
Sequences producing significant alignments: (Bits) Value
seq68 114 8e-20
seq53 107 1e-17
>seq68
Length=564861
Score = 114 bits (126), Expect = 8e-20
Identities = 159/220 (72%), Gaps = 2/220 (1%)
Strand=Plus/Plus
Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCT-AGAG 480609
||| |||||||| ||||| || || || || || || | || || || ||| ||||
Sbjct 517723 ACGCAGACGGAGAACAAGGTGCAGCGTGCTCTCCTTCTGGATGTTGTAGTC-GCTCAGAG 517781
Query 480610 TTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTC 480669
| | | ||| || || ||||| ||||| ||||||||||| ||||| || || ||||| |
Sbjct 517782 TGCGGCCATCCTCCAGCTGCTTACCAGCGAAAATAAGACGCTGTTGGTCCGGTGGAATGC 517841
Query 480670 CTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAA 480729
| |||||||| || ||||| ||||| ||||| || || | | | ||| |
Sbjct 517842 CCTCCTTGTCCTGGATCTTAGCCTTGACGTTATCAATCGTGTCCGAGGATTCGACTTCCA 517901
Query 480730 GGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
|||||||||||||| || |||||||| |||||||| ||
Sbjct 517902 ATGTAATAGTTTTACCAGTAAGAGTCTTGACGAAAATCTG 517941
Score = 91.5 bits (100), Expect = 1e-12
Identities = 161/229 (70%), Gaps = 22/229 (10%)
Strand=Plus/Plus
Query 480552 CGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCT-AGAGT 480610
|| |||||||| || || ||||| || || || || | || || || ||| |||||
Sbjct 518180 CGCAGACGGAGAACCAGGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTC-GCTCAGAGT 518238
Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670
| ||| || | ||||| |||||||| || | |||||||| || |||||||| ||
Sbjct 518239 GCGCCCATCCTCCAACTGCTTACCAGCAAAGATCAAGCGTTGTTGGTCCGGAGGAATACC 518298
Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAG-CTTCA-ATAGT--ATCAGTGTGTGAAG--- 480723
||||||||| || ||||| || ||||| || || ||| |||| |||||
Sbjct 518299 TTCCTTGTCCTGGATCTT---------AGCCTTCACATTGTCGATC-GTGTCTGAAGACT 518348
Query 480724 ---TTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
|| ||||| || || || || ||||| |||||||||||||||||
Sbjct 518349 CCACCTCCAGGGTGATCGTCTTGCCAGTGAGCGTCTTAACGAAAATTTG 518397
Score = 89.7 bits (98), Expect = 3e-12
Identities = 159/229 (69%), Gaps = 20/229 (9%)
Strand=Plus/Plus
Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610
|||||| || || || | ||||| || || || || || || || ||| | |||
Sbjct 517951 ACGAAGGCGAAGCACCAAGTGAAGAGTGCTCTCCTTCTGAATGTTGTAGTCACTCAAAGT 518010
Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670
| | ||| || | ||||| ||||| ||||||||||| ||||| || |||||||| ||
Sbjct 518011 ACGGCCATCCTCCAACTGCTTACCAGCGAAAATAAGACGCTGTTGGTCGGGAGGAATACC 518070
Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAG-CTTCA-ATAGT--ATCAGTGTGTGAAG--- 480723
||||||||| || ||||| || ||||| || || ||| |||| |||||
Sbjct 518071 TTCCTTGTCCTGGATCTT---------AGCCTTCACATTGTCGATC-GTGTCTGAAGACT 518120
Query 480724 ---TTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
|| ||||| || || || || || |||||||| ||||| |||||
Sbjct 518121 CCACCTCCAGGGTGATCGTCTTGCCAGTAAGAGTCTTGACGAAGATTTG 518169
>seq53
Length=642545
Score = 107 bits (118), Expect = 1e-17
Identities = 112/147 (76%), Gaps = 0/147 (0%)
Strand=Plus/Plus
Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610
|||||| || ||||| || || || || |||||||| | ||||| ||| || ||
Sbjct 498939 ACGAAGGCGCAGTACCAGGTGCAGGGTGCTTTCTTTTTGGATGTTATAGTCACTGAGTGT 498998
Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670
| || || || |||||||| ||||| || ||||| |||||||| |||||||||||
Sbjct 498999 ACGCCCGTCCTCTAGCTGCTTTCCGGCAAAGATCAGACGCTGTTGATCCGGAGGAATTCC 499058
Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGAC 480697
|||||||||||||||||| ||||||
Sbjct 499059 CTCCTTGTCTTGAATCTTTGCTTTGAC 499085
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3268175296568468
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |