Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20pachydermatis_20[genbank_20GCA_5F001278385.1_202015-09- 02] 91 sequences; 8,150,648 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq40 136 5e-27 seq11 120 4e-22 >seq40 Length=1303022 Score = 136 bits (150), Expect = 5e-27 Identities = 301/444 (68%), Gaps = 8/444 (2%) Strand=Plus/Minus Query 14342 CGCTCTATTGCCCATATGGCGGATGGTCTCAAGCCTTCACAGAGGAAAGTGATGTATGCT 14401 ||||| ||| || ||||| ||||||||||||||| ||| | |||||| |||||| Sbjct 157119 CGCTCGATTCCCAGTATGGTGGATGGTCTCAAGCCGGGTCAGCGCAAAGTGCTGTATGGA 157060 Query 14402 TGCTTCCATAAGAATCTCAAGGATGAAATGAAGGTGGCACAACTGGCGGCATATGTCGCG 14461 || ||| | ||| | ||| ||||| |||||| || ||| | || ||| || Sbjct 157059 TGTTTCAAGCGCAATTTGAAGACGGAAATCAAGGTGCAGCAGCTGCAAGGTTACGTCTCG 157000 Query 14462 GACAAGTCTGCGTACCACCATGGTGA--AGTATCCTTAGCGGACACGATTGTTAAGTTGG 14519 || | | |||||||||||||| || || || | | |||||||| ||||| Sbjct 156999 GAACACACGGCGTACCACCATGGCGACCAGAGTC--TGGTCATGACGATTGTCGGGTTGG 156942 Query 14520 CAAACGACTACACGGGTTCAAACAACATTAACCTTCTTGAACCGTGTGGTCAATTTGGTA 14579 | | ||||| ||| |||||| | |||||||| ||| |||||| ||||||| Sbjct 156941 CGCAGGACTATTGTGGTAGCAACAACGTGAACCTTCTCTCGCCGAATGGTCAGTTTGGTA 156882 Query 14580 CGCGTCTCATGGGTGGTAAGGATGCTTCTCAG-ACGAGGTACATTTTCACAAAACTTACC 14638 ||||| ||||| ||||||||||| | ||| || | ||||||||||| | || Sbjct 156881 CGCGTAGTATGGGCGGTAAGGATGCCGC-CAGTGCGCGTTACATTTTCAC-GGCGGTGCC 156824 Query 14639 AAGGA-GGCTCGCAAGATCTTTGATCCTCGGGATGACCCGATCCTCAACTACTTGGACGA 14697 | | | | |||||| | || |||| ||||| || | || |||||||||||||| Sbjct 156823 ACGTATTACACGCAAGCTTTTCCATCCGAAAGATGATGCGTTGCTGAACTACTTGGACGA 156764 Query 14698 TGATGGACGCTCCATTGAACCAGACTTTTACATGCCAACTTTACCAATGGTTCTCGTGAA 14757 ||||| | ||||| || || | ||| |||| | || || || |||| Sbjct 156763 CGATGGCCAGAGTATTGAGCCGGAATGGTACGTGCCTGTCGTCCCGCAAGTGCTTTTGAA 156704 Query 14758 TGGAACCGAGGGTATCGGTACGGG 14781 |||| | |||||||| |||||||| Sbjct 156703 TGGAGCGGAGGGTATTGGTACGGG 156680 Score = 98.7 bits (108), Expect = 1e-15 Identities = 223/333 (67%), Gaps = 2/333 (1%) Strand=Plus/Minus Query 13562 AAGTTGGATGACGCGAACAAGGCGGGTACGGCACAATCTGGAAAGTGTACTCTCATTGTC 13621 ||| |||| || |||||| ||| || ||| || ||| | || || | ||| | Sbjct 157896 AAGCTGGAAGATGCGAACTGGGCCGGCACGAAACGCAGTGGCGAATGCACGTTGATTCTT 157837 Query 13622 ACAGAGGGTGATTCGGCTAAAACCCTCGCGGTTGCGGGTCTCTCTGTCGTTGGTCGTGAT 13681 ||||||||||| |||||||| | || || || | || | || || ||||||||| Sbjct 157836 ACAGAGGGTGACTCGGCTAAGGCGCTTGCTGTCTCTGGCTTGAGTGAGGTCGGTCGTGAT 157777 Query 13682 CACTACGGTGTGTTCCCACTTCGCGGTAA-ATGTAAGAATGTTCGGGACGCTTCGGTGGC 13740 |||||||||||||||||| || ||||| ||| |||||| || || || ||| | Sbjct 157776 GCCTACGGTGTGTTCCCACTGCGTGGTAAGCTGT-TGAATGTGCGAGAAGCCTCGCATGA 157718 Query 13741 ACAGCTCACATCAAACCAGGAGTTCAACGATCTCAAGAAGATCCTTGGTCTTCAACAAGG 13800 ||| | | ||| |||| |||| | |||| |||| || ||||| || || || Sbjct 157717 TCAGATTATGAAGAACACGGAGATCAAGAACATCAAAGAGATTCTCGGTCTGCAGCATGG 157658 Query 13801 AAAAGACTACCAAGATGTTTCTGAACTTCGCTATGGTCGTCTTATGATTATGACAGATGC 13860 |||| || ||| || | || ||||| || | ||||||||||| || Sbjct 157657 CAAAGTGTATTCGTCTGTGGATGGTTTGCGATATGGCAGTTTGATGATTATGACGGACCA 157598 Query 13861 CGATAATGATGGTTCTCACATCAAGGGTCTCAT 13893 ||| ||||| || ||||||||||| || || Sbjct 157597 GGATTTCGATGGCTCGCACATCAAGGGACTTAT 157565 >seq11 Length=163833 Score = 120 bits (132), Expect = 4e-22 Identities = 126/163 (77%), Gaps = 2/163 (1%) Strand=Plus/Plus Query 65067 CTCCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTC 65126 ||| ||| | ||||||||| | |||||||| |||||||| ||||||||||| || || Sbjct 12415 CTCGTTCTCGGAGCGCCTTGTGGCGTTTGCCGCCGTGGAGGGCATCTTCTTCTCGGGCTC 12474 Query 65127 ATTCTGCG-CTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAA 65185 || |||| | || | ||| |||||||||| ||||||||||| || || | ||||| | Sbjct 12475 GTT-TGCGTCGATCTTCTGGCTGAAGAAGCGTGGTCTCATGCCGGGTCTGTCGTTCTCGA 12533 Query 65186 ATGAACTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTTTGC 65228 | || |||||| |||| || |||||||| ||| || ||||| Sbjct 12534 ACGAGCTTATTACCCGTGACGAGGGTCTGCACACCGACTTTGC 12576 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596568921402080