Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Malassezia_20pachydermatis_20[genbank_20GCA_5F001278385.1_202015-09-
02] 91 sequences; 8,150,648 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq40 136 5e-27
seq11 120 4e-22
>seq40
Length=1303022
Score = 136 bits (150), Expect = 5e-27
Identities = 301/444 (68%), Gaps = 8/444 (2%)
Strand=Plus/Minus
Query 14342 CGCTCTATTGCCCATATGGCGGATGGTCTCAAGCCTTCACAGAGGAAAGTGATGTATGCT 14401
||||| ||| || ||||| ||||||||||||||| ||| | |||||| ||||||
Sbjct 157119 CGCTCGATTCCCAGTATGGTGGATGGTCTCAAGCCGGGTCAGCGCAAAGTGCTGTATGGA 157060
Query 14402 TGCTTCCATAAGAATCTCAAGGATGAAATGAAGGTGGCACAACTGGCGGCATATGTCGCG 14461
|| ||| | ||| | ||| ||||| |||||| || ||| | || ||| ||
Sbjct 157059 TGTTTCAAGCGCAATTTGAAGACGGAAATCAAGGTGCAGCAGCTGCAAGGTTACGTCTCG 157000
Query 14462 GACAAGTCTGCGTACCACCATGGTGA--AGTATCCTTAGCGGACACGATTGTTAAGTTGG 14519
|| | | |||||||||||||| || || || | | |||||||| |||||
Sbjct 156999 GAACACACGGCGTACCACCATGGCGACCAGAGTC--TGGTCATGACGATTGTCGGGTTGG 156942
Query 14520 CAAACGACTACACGGGTTCAAACAACATTAACCTTCTTGAACCGTGTGGTCAATTTGGTA 14579
| | ||||| ||| |||||| | |||||||| ||| |||||| |||||||
Sbjct 156941 CGCAGGACTATTGTGGTAGCAACAACGTGAACCTTCTCTCGCCGAATGGTCAGTTTGGTA 156882
Query 14580 CGCGTCTCATGGGTGGTAAGGATGCTTCTCAG-ACGAGGTACATTTTCACAAAACTTACC 14638
||||| ||||| ||||||||||| | ||| || | ||||||||||| | ||
Sbjct 156881 CGCGTAGTATGGGCGGTAAGGATGCCGC-CAGTGCGCGTTACATTTTCAC-GGCGGTGCC 156824
Query 14639 AAGGA-GGCTCGCAAGATCTTTGATCCTCGGGATGACCCGATCCTCAACTACTTGGACGA 14697
| | | | |||||| | || |||| ||||| || | || ||||||||||||||
Sbjct 156823 ACGTATTACACGCAAGCTTTTCCATCCGAAAGATGATGCGTTGCTGAACTACTTGGACGA 156764
Query 14698 TGATGGACGCTCCATTGAACCAGACTTTTACATGCCAACTTTACCAATGGTTCTCGTGAA 14757
||||| | ||||| || || | ||| |||| | || || || ||||
Sbjct 156763 CGATGGCCAGAGTATTGAGCCGGAATGGTACGTGCCTGTCGTCCCGCAAGTGCTTTTGAA 156704
Query 14758 TGGAACCGAGGGTATCGGTACGGG 14781
|||| | |||||||| ||||||||
Sbjct 156703 TGGAGCGGAGGGTATTGGTACGGG 156680
Score = 98.7 bits (108), Expect = 1e-15
Identities = 223/333 (67%), Gaps = 2/333 (1%)
Strand=Plus/Minus
Query 13562 AAGTTGGATGACGCGAACAAGGCGGGTACGGCACAATCTGGAAAGTGTACTCTCATTGTC 13621
||| |||| || |||||| ||| || ||| || ||| | || || | ||| |
Sbjct 157896 AAGCTGGAAGATGCGAACTGGGCCGGCACGAAACGCAGTGGCGAATGCACGTTGATTCTT 157837
Query 13622 ACAGAGGGTGATTCGGCTAAAACCCTCGCGGTTGCGGGTCTCTCTGTCGTTGGTCGTGAT 13681
||||||||||| |||||||| | || || || | || | || || |||||||||
Sbjct 157836 ACAGAGGGTGACTCGGCTAAGGCGCTTGCTGTCTCTGGCTTGAGTGAGGTCGGTCGTGAT 157777
Query 13682 CACTACGGTGTGTTCCCACTTCGCGGTAA-ATGTAAGAATGTTCGGGACGCTTCGGTGGC 13740
|||||||||||||||||| || ||||| ||| |||||| || || || ||| |
Sbjct 157776 GCCTACGGTGTGTTCCCACTGCGTGGTAAGCTGT-TGAATGTGCGAGAAGCCTCGCATGA 157718
Query 13741 ACAGCTCACATCAAACCAGGAGTTCAACGATCTCAAGAAGATCCTTGGTCTTCAACAAGG 13800
||| | | ||| |||| |||| | |||| |||| || ||||| || || ||
Sbjct 157717 TCAGATTATGAAGAACACGGAGATCAAGAACATCAAAGAGATTCTCGGTCTGCAGCATGG 157658
Query 13801 AAAAGACTACCAAGATGTTTCTGAACTTCGCTATGGTCGTCTTATGATTATGACAGATGC 13860
|||| || ||| || | || ||||| || | ||||||||||| ||
Sbjct 157657 CAAAGTGTATTCGTCTGTGGATGGTTTGCGATATGGCAGTTTGATGATTATGACGGACCA 157598
Query 13861 CGATAATGATGGTTCTCACATCAAGGGTCTCAT 13893
||| ||||| || ||||||||||| || ||
Sbjct 157597 GGATTTCGATGGCTCGCACATCAAGGGACTTAT 157565
>seq11
Length=163833
Score = 120 bits (132), Expect = 4e-22
Identities = 126/163 (77%), Gaps = 2/163 (1%)
Strand=Plus/Plus
Query 65067 CTCCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTC 65126
||| ||| | ||||||||| | |||||||| |||||||| ||||||||||| || ||
Sbjct 12415 CTCGTTCTCGGAGCGCCTTGTGGCGTTTGCCGCCGTGGAGGGCATCTTCTTCTCGGGCTC 12474
Query 65127 ATTCTGCG-CTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAA 65185
|| |||| | || | ||| |||||||||| ||||||||||| || || | ||||| |
Sbjct 12475 GTT-TGCGTCGATCTTCTGGCTGAAGAAGCGTGGTCTCATGCCGGGTCTGTCGTTCTCGA 12533
Query 65186 ATGAACTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTTTGC 65228
| || |||||| |||| || |||||||| ||| || |||||
Sbjct 12534 ACGAGCTTATTACCCGTGACGAGGGTCTGCACACCGACTTTGC 12576
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596568921402080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |