Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Malassezia_20pachydermatis_20[genbank_20GCA_5F001278385.1_202015-09-
02] 91 sequences; 8,150,648 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq40 122 3e-22
seq47 105 2e-17
>seq40
Length=1303022
Score = 122 bits (134), Expect = 3e-22
Identities = 223/325 (69%), Gaps = 4/325 (1%)
Strand=Plus/Minus
Query 302554 TCATAACCAATCATAATGTCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGTT 302613
||||| | |||| | | || |||| ||||| | |||||| ||||| ||||||||
Sbjct 1284736 TCATAGCAAATCGTCACATCCTCCAGCGCCTTGACGAGACGACGTTGAATGTAACCAGTC 1284677
Query 302614 GTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAAT 302673
| || || ||||||||||| || ||||| ||||||| |||| |||||||||||
Sbjct 1284676 TCGGCCGTCTTCACAGCTGTATCGATCAGACCTTCACGACCGGCCATGGCATGGAAGAAA 1284617
Query 302674 AGCTCTTCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGC 302733
| ||| | | | || || | | | | ||| |||| || || ||||| |||||||
Sbjct 1284616 AACTCGTGGGCTGTGAGACCACGCAAATACGAGTTCTCCACAAATCCACGGCTCTCGGGC 1284557
Query 302734 GAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGC 302793
| | |||| ||| |||||||| ||||| | | || | ||| | || ||||||
Sbjct 1284556 GTAAAGTCGTCCTTCGTAAAGTGCGGCAGACTGCGGTGGCGGAAACCGAACGGAATACGC 1284497
Query 302794 TTTCCATCAACGTTCTGCTGTCCCAGGCACGAAATCATCTGCGAAATATT--TAAATCAC 302851
|| || || || |||||| || | || | | ||||||||| || || | || |
Sbjct 1284496 TTACCTTCGACAGACTGCTGACCGACACAGGCAGACATCTGCGAGATGTTGATGAACGA- 1284438
Query 302852 TGCCCTTGGAGCCAGCATTTACCAT 302876
|||||||| |||||| | |||||
Sbjct 1284437 -ACCCTTGGAACCAGCAATCACCAT 1284414
>seq47
Length=989840
Score = 105 bits (116), Expect = 2e-17
Identities = 160/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 251413 CCACACTTATTACACACATGGACGCTGTAAGCATCAGATGCGTCATATAGCCGACCCTTG 251472
|||||| || ||| | ||| | || ||| |||||| | || || | || |||||
Sbjct 384479 CCACACAGATCACAGATATGCAGGCGGTACGCATCACTGGTATCGTACATGCGCTCCTTG 384420
Query 251473 GTGAAGCGAGATGCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGA 251532
|||| | |||||| ||||||||||| ||||||||||| ||||||||||| |||
Sbjct 384419 AGGAAGTAGGCCATACCGTGGGAAATCATACAGTCACGCTCCATCTCACCGAAACGCAGA 384360
Query 251533 CCACCATCGCGAGCCCTACCCTCGGCAGGCTGACGAGTGAGATTAACCATAGGACCGATG 251592
|||||||||||| | ||| || | |||||||| || || | || |||||
Sbjct 384359 CCACCATCGCGACTACGACCTTCCACGGGCTGACGCGTAAGGATCTGCACGGGACCACGC 384300
Query 251593 GAGCGGCTATGTTGCTTATCATTTACCATATGCTTGAGACGCTGGTAG 251640
| || || || ||| || | ||||| ||||| || |||||||||
Sbjct 384299 GCACGACTGTGGATCTTGTCGTCGACCATGTGCTTCAGGCGCTGGTAG 384252
Score = 87.8 bits (96), Expect = 5e-12
Identities = 108/145 (74%), Gaps = 6/145 (4%)
Strand=Plus/Minus
Query 251843 CGATAGTCATACGACTGGGAATAGCATGGGGATTGATGATGATGTCGGGTTTCAGTCCAT 251902
|||||||||||||||||||||| ||||| || |||||||| ||||| || | | || |
Sbjct 384049 CGATAGTCATACGACTGGGAATGGCATGTGGGTTGATGATAATGTCAGGCGTGATGCCTT 383990
Query 251903 CAGCAGTGAAGGGCATATCCTTTTCCT--CAATA-ATGTTTCCAATAGTTCCCTTTTGTC 251959
| || ||||| |||| ||| ||||| | || | | || || || || |||||||
Sbjct 383989 CCGCTGTGAACGGCAAATC---TTCCTGGCGGTACGTAATACCGATCGTACCTTTTTGTC 383933
Query 251960 CGTGACGAGAACTGAACTTATCACC 251984
||||||| || ||||| |||||
Sbjct 383932 CGTGACGCGAGGCAAACTTGTCACC 383908
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471815883952667
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |