Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20pachydermatis_20[genbank_20GCA_5F001278385.1_202015-09- 02] 91 sequences; 8,150,648 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq40 122 3e-22 seq47 105 2e-17 >seq40 Length=1303022 Score = 122 bits (134), Expect = 3e-22 Identities = 223/325 (69%), Gaps = 4/325 (1%) Strand=Plus/Minus Query 302554 TCATAACCAATCATAATGTCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGTT 302613 ||||| | |||| | | || |||| ||||| | |||||| ||||| |||||||| Sbjct 1284736 TCATAGCAAATCGTCACATCCTCCAGCGCCTTGACGAGACGACGTTGAATGTAACCAGTC 1284677 Query 302614 GTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAAT 302673 | || || ||||||||||| || ||||| ||||||| |||| ||||||||||| Sbjct 1284676 TCGGCCGTCTTCACAGCTGTATCGATCAGACCTTCACGACCGGCCATGGCATGGAAGAAA 1284617 Query 302674 AGCTCTTCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGC 302733 | ||| | | | || || | | | | ||| |||| || || ||||| ||||||| Sbjct 1284616 AACTCGTGGGCTGTGAGACCACGCAAATACGAGTTCTCCACAAATCCACGGCTCTCGGGC 1284557 Query 302734 GAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGC 302793 | | |||| ||| |||||||| ||||| | | || | ||| | || |||||| Sbjct 1284556 GTAAAGTCGTCCTTCGTAAAGTGCGGCAGACTGCGGTGGCGGAAACCGAACGGAATACGC 1284497 Query 302794 TTTCCATCAACGTTCTGCTGTCCCAGGCACGAAATCATCTGCGAAATATT--TAAATCAC 302851 || || || || |||||| || | || | | ||||||||| || || | || | Sbjct 1284496 TTACCTTCGACAGACTGCTGACCGACACAGGCAGACATCTGCGAGATGTTGATGAACGA- 1284438 Query 302852 TGCCCTTGGAGCCAGCATTTACCAT 302876 |||||||| |||||| | ||||| Sbjct 1284437 -ACCCTTGGAACCAGCAATCACCAT 1284414 >seq47 Length=989840 Score = 105 bits (116), Expect = 2e-17 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 251413 CCACACTTATTACACACATGGACGCTGTAAGCATCAGATGCGTCATATAGCCGACCCTTG 251472 |||||| || ||| | ||| | || ||| |||||| | || || | || ||||| Sbjct 384479 CCACACAGATCACAGATATGCAGGCGGTACGCATCACTGGTATCGTACATGCGCTCCTTG 384420 Query 251473 GTGAAGCGAGATGCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGA 251532 |||| | |||||| ||||||||||| ||||||||||| ||||||||||| ||| Sbjct 384419 AGGAAGTAGGCCATACCGTGGGAAATCATACAGTCACGCTCCATCTCACCGAAACGCAGA 384360 Query 251533 CCACCATCGCGAGCCCTACCCTCGGCAGGCTGACGAGTGAGATTAACCATAGGACCGATG 251592 |||||||||||| | ||| || | |||||||| || || | || ||||| Sbjct 384359 CCACCATCGCGACTACGACCTTCCACGGGCTGACGCGTAAGGATCTGCACGGGACCACGC 384300 Query 251593 GAGCGGCTATGTTGCTTATCATTTACCATATGCTTGAGACGCTGGTAG 251640 | || || || ||| || | ||||| ||||| || ||||||||| Sbjct 384299 GCACGACTGTGGATCTTGTCGTCGACCATGTGCTTCAGGCGCTGGTAG 384252 Score = 87.8 bits (96), Expect = 5e-12 Identities = 108/145 (74%), Gaps = 6/145 (4%) Strand=Plus/Minus Query 251843 CGATAGTCATACGACTGGGAATAGCATGGGGATTGATGATGATGTCGGGTTTCAGTCCAT 251902 |||||||||||||||||||||| ||||| || |||||||| ||||| || | | || | Sbjct 384049 CGATAGTCATACGACTGGGAATGGCATGTGGGTTGATGATAATGTCAGGCGTGATGCCTT 383990 Query 251903 CAGCAGTGAAGGGCATATCCTTTTCCT--CAATA-ATGTTTCCAATAGTTCCCTTTTGTC 251959 | || ||||| |||| ||| ||||| | || | | || || || || ||||||| Sbjct 383989 CCGCTGTGAACGGCAAATC---TTCCTGGCGGTACGTAATACCGATCGTACCTTTTTGTC 383933 Query 251960 CGTGACGAGAACTGAACTTATCACC 251984 ||||||| || ||||| ||||| Sbjct 383932 CGTGACGCGAGGCAAACTTGTCACC 383908 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471815883952667