Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Malassezia_20pachydermatis_20[genbank_20GCA_5F001278385.1_202015-09-
02] 91 sequences; 8,150,648 total letters
Query= NC_021858.1
Length=1908524
Score E
Sequences producing significant alignments: (Bits) Value
seq11 172 7e-37
seq40 107 2e-17
seq1 96.9 4e-14
>seq11
Length=163833
Score = 172 bits (190), Expect = 7e-37
Identities = 233/322 (72%), Gaps = 7/322 (2%)
Strand=Plus/Minus
Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750
|||||||| || ||| |||| || |||||||||||||| | |||||||| ||||||||
Sbjct 12873 GCCTTGGCATAGTCGGCCACACGACGCTCGAAAAAGTTCGACTTGCCCTGCAGCGAGATG 12814
Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCG 868810
|||||| | || || || | || | ||||||||| | ||||| | |
Sbjct 12813 TTCTCCATAAAGTCAAATGGATTCGTCGAGTGGTAGTGCTTCGGGTTGCCGAGAGCGACC 12754
Query 868811 AGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATG 868870
||||| |||||||| |||||||| ||||||||||||||||| | || |||||||||||
Sbjct 12753 AGCAGACGGTCGGCCACAAACTCAATGTACTGGCACATGAGACGAGCATTCATGCCGATA 12694
Query 868871 AGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGATG 868930
|||| ||| ||||| | ||| ||| ||| || ||||||||| ||| |||||| |||
Sbjct 12693 AGCGACACAGGCAGAGCCTCCGTCAAAAAGTCCTTCTCGATCGAGACAGCCTCGGTAATG 12634
Query 868931 ATCTGCCTGGGCACGTC---GGCCGAGGGCTTGTTGACGAGCATCGTGTAGAGCAGGCAG 868987
|| | || | ||| | |||| |||| || | | | || | |||| |||
Sbjct 12633 ATGCGGTTGACCGTGTCAGGGTGCGAGCGCTTCTTCAGGTG---ACTGAACAGCAAGCAC 12577
Query 868988 GCAAAGTCGCAGTGCA-ACCCT 869008
||||||||| ||||| |||||
Sbjct 12576 GCAAAGTCGGTGTGCAGACCCT 12555
Score = 147 bits (162), Expect = 3e-29
Identities = 208/290 (72%), Gaps = 3/290 (1%)
Strand=Plus/Minus
Query 869631 CCGAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTT 869690
||||||| |||||||| || |||||||| ||||| ||| | |||| ||||| |
Sbjct 12278 CCGAGTGAATGTTCTCCATCATAATCTGGAAACCGTAGAAGCAGCGAGCCTCCGCCACCT 12219
Query 869691 GGACCTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGA 869750
| || || || |||| || | |||||||||| ||| || ||||| |||||||
Sbjct 12218 GCACTTCGTTGCTGAAACGCTCCAACAGGTTCTCGTTCACAATACCGTCCGACGCGGCGA 12159
Query 869751 AAAAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGA-GCGACA--CCCAGT 869807
| || || |||||| | | |||||| ||||||| |||| | | ||| ||||||
Sbjct 12158 AGAACGCAAGGACGGTACTCACAAAGTGACGCTCGTTGTCGTTCATGCGGTTGTCCCAGT 12099
Query 869808 GGACGGTGTCGGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTT 869867
| ||| || || |||||||| |||||||||| ||||||||| ||||| |
Sbjct 12098 CGTGCAAGTCCTTCGACAGATCGACCTCCTCAGCGGTCCAGAACGAGGCCTCAGCCTTCT 12039
Query 869868 TGTACATCTCCCATACTTGCTGGTAGCGGATAGGGAAGAGGACAAAGCGG 869917
|||||||| |||| | | ||||||||||| ||||| || |||||||||
Sbjct 12038 TGTACATCGCCCAGATCTCGTGGTAGCGGATCGGGAACAGCACAAAGCGG 11989
Score = 96.9 bits (106), Expect = 4e-14
Identities = 176/253 (70%), Gaps = 11/253 (4%)
Strand=Plus/Minus
Query 869216 AGGCCGGGCATGAGGCCGCGCTTCTTGAGCCAAAAGATGG-CGCAGAAACTGCCCGAGAA 869274
|| || |||||||| || |||||||| ||||| ||||| | |||| || |||||||||
Sbjct 12522 AGACCCGGCATGAGACCACGCTTCTTCAGCCAGAAGATCGACGCA-AACGAGCCCGAGAA 12464
Query 869275 AAAGATGCCCTCGACGGCGGCAAAGCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTC 869334
||||||||||| ||||||||||| | | || ||||| | || |||||| |
Sbjct 12463 GAAGATGCCCTCCACGGCGGCAAACGCCACAAGGCGCTCCGAGAA-----CGAGGCAC-G 12410
Query 869335 CTTGT---TGATCCACTTCATCGCCCAGTCGGCCTTTTTCCTCACCGACGGCACCGTGTC 869391
||||| ||||| | ||||| |||||||| | | |||| || | || ||
Sbjct 12409 CTTGTCCGCAATCCAGCGAAGGGCCCACTCGGCCTTCTGCTTCACAACGGGAATGGTCTC 12350
Query 869392 GATGGCGCGAAAGAGGTGGTCCTTTTCGGCCGGGTCCTTGACATAGGTGTCGATCAGGAG 869451
||| ||| || |||| || | |||| ||| || || |||||||| || ||
Sbjct 12349 GATAGCGTTGAACAGGTACTCGCGCTGCGCCGTGTCGCGGATGTACGTGTCGATGAGCAG 12290
Query 869452 CGAATAGGTCTCC 869464
||| |||||||||
Sbjct 12289 CGAGTAGGTCTCC 12277
>seq40
Length=1303022
Score = 107 bits (118), Expect = 2e-17
Identities = 154/217 (71%), Gaps = 0/217 (0%)
Strand=Plus/Plus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| ||| ||| || ||| | | ||||| || || || ||||||||||| |||| |
Sbjct 399601 GCTTGGACAGCTCACCGGGGAGAATCAGACGAACAGCAGTCTGGATCTCACGCGACGAAA 399660
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| ||| | |||||| || || || |||||||||| ||||||| |||| |
Sbjct 399661 TGGTGCTCTTCTTGTTGTAGCTGGCGAGCTTCGAGGCCTCGGTGGCGATGCGCTCGAAAA 399720
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
|||| | || |||||||| | || | ||| | |||||| ||||| || ||| ||||
Sbjct 399721 TGTCCTGCACGAACGAGTTGAGGATAGCCATGGCCTTGTTCGAGATACCAGTGTCCGGGT 399780
Query 1254523 GCACCTGCTTGAGCACCTTGTAGATGAACGACGAGTA 1254559
|||||||||||||||| ||| ||| | | ||||||
Sbjct 399781 GCACCTGCTTGAGCACACGGTAAATGTAGGTCGAGTA 399817
Score = 86.0 bits (94), Expect = 8e-11
Identities = 119/163 (73%), Gaps = 4/163 (2%)
Strand=Plus/Plus
Query 509034 CGCCCGAGAGCCGCGGCTTTGTGCGCAACTCGTACGAGCGCGGCCTCAACTCGCGCGAGA 509093
||||||||||||| || |||||| |||||||| ||| || |||| | | ||||
Sbjct 1284556 CGCCCGAGAGCCGTGGATTTGTGGAGAACTCGTATTTGCGTGGTCTCACAGCCCACGAG- 1284614
Query 509094 TGTTTCTGCACATG--ATCGGCGGGCGCGAGGGCCTCGTCGACACGGCCGTCAAGACGGC 509151
| ||||| | |||| || | ||| || || || || |||| || || || ||||||||
Sbjct 1284615 TTTTTCTTC-CATGCCATGGCCGGTCGTGAAGGTCTGATCGATACAGCTGTGAAGACGGC 1284673
Query 509152 CGAGACGGGCTACATCCAGCGCCGGTGCATCAAGTCGATGGAG 509194
|||||| || ||||| || || || | ||||| || |||||
Sbjct 1284674 CGAGACTGGTTACATTCAACGTCGTCTCGTCAAGGCGCTGGAG 1284716
>seq1
Length=1489072
Score = 96.9 bits (106), Expect = 4e-14
Identities = 74/88 (84%), Gaps = 0/88 (0%)
Strand=Plus/Plus
Query 1726956 GGCACGACCCGTCGAGGTCGGGGTCGCTGGCCAGGCCCTTCCACCCGACGGTCGTGCGCG 1727015
|| |||| ||||||||||| |||||| || || |||||||| || |||||||||||||
Sbjct 792074 GGTACGAGCCGTCGAGGTCAGGGTCGTTGATGAGACCCTTCCAGCCCACGGTCGTGCGCG 792133
Query 1727016 GCTTTTCGACATAGGCGCGCATGACCAC 1727043
|||| |||| ||||||||||| |||||
Sbjct 792134 GCTTCTCGAAGTAGGCGCGCATAACCAC 792161
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 6107131732113847
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |