Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20pachydermatis_20[genbank_20GCA_5F001278385.1_202015-09- 02] 91 sequences; 8,150,648 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq11 172 7e-37 seq40 107 2e-17 seq1 96.9 4e-14 >seq11 Length=163833 Score = 172 bits (190), Expect = 7e-37 Identities = 233/322 (72%), Gaps = 7/322 (2%) Strand=Plus/Minus Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750 |||||||| || ||| |||| || |||||||||||||| | |||||||| |||||||| Sbjct 12873 GCCTTGGCATAGTCGGCCACACGACGCTCGAAAAAGTTCGACTTGCCCTGCAGCGAGATG 12814 Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCG 868810 |||||| | || || || | || | ||||||||| | ||||| | | Sbjct 12813 TTCTCCATAAAGTCAAATGGATTCGTCGAGTGGTAGTGCTTCGGGTTGCCGAGAGCGACC 12754 Query 868811 AGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATG 868870 ||||| |||||||| |||||||| ||||||||||||||||| | || ||||||||||| Sbjct 12753 AGCAGACGGTCGGCCACAAACTCAATGTACTGGCACATGAGACGAGCATTCATGCCGATA 12694 Query 868871 AGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGATG 868930 |||| ||| ||||| | ||| ||| ||| || ||||||||| ||| |||||| ||| Sbjct 12693 AGCGACACAGGCAGAGCCTCCGTCAAAAAGTCCTTCTCGATCGAGACAGCCTCGGTAATG 12634 Query 868931 ATCTGCCTGGGCACGTC---GGCCGAGGGCTTGTTGACGAGCATCGTGTAGAGCAGGCAG 868987 || | || | ||| | |||| |||| || | | | || | |||| ||| Sbjct 12633 ATGCGGTTGACCGTGTCAGGGTGCGAGCGCTTCTTCAGGTG---ACTGAACAGCAAGCAC 12577 Query 868988 GCAAAGTCGCAGTGCA-ACCCT 869008 ||||||||| ||||| ||||| Sbjct 12576 GCAAAGTCGGTGTGCAGACCCT 12555 Score = 147 bits (162), Expect = 3e-29 Identities = 208/290 (72%), Gaps = 3/290 (1%) Strand=Plus/Minus Query 869631 CCGAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTT 869690 ||||||| |||||||| || |||||||| ||||| ||| | |||| ||||| | Sbjct 12278 CCGAGTGAATGTTCTCCATCATAATCTGGAAACCGTAGAAGCAGCGAGCCTCCGCCACCT 12219 Query 869691 GGACCTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGA 869750 | || || || |||| || | |||||||||| ||| || ||||| ||||||| Sbjct 12218 GCACTTCGTTGCTGAAACGCTCCAACAGGTTCTCGTTCACAATACCGTCCGACGCGGCGA 12159 Query 869751 AAAAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGA-GCGACA--CCCAGT 869807 | || || |||||| | | |||||| ||||||| |||| | | ||| |||||| Sbjct 12158 AGAACGCAAGGACGGTACTCACAAAGTGACGCTCGTTGTCGTTCATGCGGTTGTCCCAGT 12099 Query 869808 GGACGGTGTCGGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTT 869867 | ||| || || |||||||| |||||||||| ||||||||| ||||| | Sbjct 12098 CGTGCAAGTCCTTCGACAGATCGACCTCCTCAGCGGTCCAGAACGAGGCCTCAGCCTTCT 12039 Query 869868 TGTACATCTCCCATACTTGCTGGTAGCGGATAGGGAAGAGGACAAAGCGG 869917 |||||||| |||| | | ||||||||||| ||||| || ||||||||| Sbjct 12038 TGTACATCGCCCAGATCTCGTGGTAGCGGATCGGGAACAGCACAAAGCGG 11989 Score = 96.9 bits (106), Expect = 4e-14 Identities = 176/253 (70%), Gaps = 11/253 (4%) Strand=Plus/Minus Query 869216 AGGCCGGGCATGAGGCCGCGCTTCTTGAGCCAAAAGATGG-CGCAGAAACTGCCCGAGAA 869274 || || |||||||| || |||||||| ||||| ||||| | |||| || ||||||||| Sbjct 12522 AGACCCGGCATGAGACCACGCTTCTTCAGCCAGAAGATCGACGCA-AACGAGCCCGAGAA 12464 Query 869275 AAAGATGCCCTCGACGGCGGCAAAGCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTC 869334 ||||||||||| ||||||||||| | | || ||||| | || |||||| | Sbjct 12463 GAAGATGCCCTCCACGGCGGCAAACGCCACAAGGCGCTCCGAGAA-----CGAGGCAC-G 12410 Query 869335 CTTGT---TGATCCACTTCATCGCCCAGTCGGCCTTTTTCCTCACCGACGGCACCGTGTC 869391 ||||| ||||| | ||||| |||||||| | | |||| || | || || Sbjct 12409 CTTGTCCGCAATCCAGCGAAGGGCCCACTCGGCCTTCTGCTTCACAACGGGAATGGTCTC 12350 Query 869392 GATGGCGCGAAAGAGGTGGTCCTTTTCGGCCGGGTCCTTGACATAGGTGTCGATCAGGAG 869451 ||| ||| || |||| || | |||| ||| || || |||||||| || || Sbjct 12349 GATAGCGTTGAACAGGTACTCGCGCTGCGCCGTGTCGCGGATGTACGTGTCGATGAGCAG 12290 Query 869452 CGAATAGGTCTCC 869464 ||| ||||||||| Sbjct 12289 CGAGTAGGTCTCC 12277 >seq40 Length=1303022 Score = 107 bits (118), Expect = 2e-17 Identities = 154/217 (71%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||| ||| || ||| | | ||||| || || || ||||||||||| |||| | Sbjct 399601 GCTTGGACAGCTCACCGGGGAGAATCAGACGAACAGCAGTCTGGATCTCACGCGACGAAA 399660 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| | |||||| || || || |||||||||| ||||||| |||| | Sbjct 399661 TGGTGCTCTTCTTGTTGTAGCTGGCGAGCTTCGAGGCCTCGGTGGCGATGCGCTCGAAAA 399720 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||| | || |||||||| | || | ||| | |||||| ||||| || ||| |||| Sbjct 399721 TGTCCTGCACGAACGAGTTGAGGATAGCCATGGCCTTGTTCGAGATACCAGTGTCCGGGT 399780 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATGAACGACGAGTA 1254559 |||||||||||||||| ||| ||| | | |||||| Sbjct 399781 GCACCTGCTTGAGCACACGGTAAATGTAGGTCGAGTA 399817 Score = 86.0 bits (94), Expect = 8e-11 Identities = 119/163 (73%), Gaps = 4/163 (2%) Strand=Plus/Plus Query 509034 CGCCCGAGAGCCGCGGCTTTGTGCGCAACTCGTACGAGCGCGGCCTCAACTCGCGCGAGA 509093 ||||||||||||| || |||||| |||||||| ||| || |||| | | |||| Sbjct 1284556 CGCCCGAGAGCCGTGGATTTGTGGAGAACTCGTATTTGCGTGGTCTCACAGCCCACGAG- 1284614 Query 509094 TGTTTCTGCACATG--ATCGGCGGGCGCGAGGGCCTCGTCGACACGGCCGTCAAGACGGC 509151 | ||||| | |||| || | ||| || || || || |||| || || || |||||||| Sbjct 1284615 TTTTTCTTC-CATGCCATGGCCGGTCGTGAAGGTCTGATCGATACAGCTGTGAAGACGGC 1284673 Query 509152 CGAGACGGGCTACATCCAGCGCCGGTGCATCAAGTCGATGGAG 509194 |||||| || ||||| || || || | ||||| || ||||| Sbjct 1284674 CGAGACTGGTTACATTCAACGTCGTCTCGTCAAGGCGCTGGAG 1284716 >seq1 Length=1489072 Score = 96.9 bits (106), Expect = 4e-14 Identities = 74/88 (84%), Gaps = 0/88 (0%) Strand=Plus/Plus Query 1726956 GGCACGACCCGTCGAGGTCGGGGTCGCTGGCCAGGCCCTTCCACCCGACGGTCGTGCGCG 1727015 || |||| ||||||||||| |||||| || || |||||||| || ||||||||||||| Sbjct 792074 GGTACGAGCCGTCGAGGTCAGGGTCGTTGATGAGACCCTTCCAGCCCACGGTCGTGCGCG 792133 Query 1727016 GCTTTTCGACATAGGCGCGCATGACCAC 1727043 |||| |||| ||||||||||| ||||| Sbjct 792134 GCTTCTCGAAGTAGGCGCGCATAACCAC 792161 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107131732113847