Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Malassezia_20pachydermatis_20[genbank_20GCA_5F001278385.1_202015-09-
02] 91 sequences; 8,150,648 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq68 98.7 9e-16
seq53 93.3 4e-14
seq11 82.4 7e-11
seq1 82.4 7e-11
>seq68
Length=564861
Score = 98.7 bits (108), Expect = 9e-16
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||| || || |||| ||||| || || || || || || || || || || | |
Sbjct 518400 ATGCAAATTTTCGTTAAGACGCTCACTGGCAAGACGATCACCCTGGAGGTGGAGTCTTCA 518341
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || |||||||| ||||| ||||| || ||||| || |||
Sbjct 518340 GACACGATCGACAATGTGAAGGCTAAGATCCAGGACAAGGAAGGTATTCCTCCGGACCAA 518281
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
||||| ||||||||||| || || ||| |||||||| | | | || || || |||
Sbjct 518280 CAACGCTTGATCTTTGCTGGTAAGCAGTTGGAGGATGGGCGCACTCTGAGCGACTACAAC 518221
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
|| || ||||| || || ||| |||| | || ||||||| ||
Sbjct 518220 ATCCAGAAGGAGAGCACTCTTCACCTGGTTCTCCGTCTGCGCGGTGG 518174
Score = 93.3 bits (102), Expect = 4e-14
Identities = 114/156 (73%), Gaps = 0/156 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||| || | || || || || |||||||||||||| | ||||| ||| || |
Sbjct 517944 ATGCAGATTTTCGTCAAGACTCTTACTGGTAAAACTATTACATTGGAAGTCGAATCCTCG 517885
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || |||||||| ||||| || || || || || || |||
Sbjct 517884 GACACGATTGATAACGTCAAGGCTAAGATCCAGGACAAGGAGGGCATTCCACCGGACCAA 517825
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGAT 24859
|| ||| | || || || || || ||||||||||||
Sbjct 517824 CAGCGTCTTATTTTCGCTGGTAAGCAGCTGGAGGAT 517789
>seq53
Length=642545
Score = 93.3 bits (102), Expect = 4e-14
Identities = 108/142 (76%), Gaps = 4/142 (3%)
Strand=Plus/Minus
Query 24779 GTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTT 24838
|| ||| |||||| |||||||| || ||||| ||||| |||||||| ||| ||||||||
Sbjct 499085 GTCAAAGCAAAGATTCAAGACAAGGAGGGAATTCCTCCGGATCAACAGCGTCTGATCTTT 499026
Query 24839 GCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCA--GATTATAACATTCAAAAGGAAT 24896
||||| || ||||| ||||| | | ||| ||| || |||||||| ||||| |||
Sbjct 499025 GCCGGAAAGCAGCTAGAGGACGGGCG-TACA-CTCAGTGACTATAACATCCAAAAAGAAA 498968
Query 24897 CGACACTACACTTGGTGTTGCG 24918
|| || ||| |||| ||||
Sbjct 498967 GCACCCTGCACCTGGTACTGCG 498946
>seq11
Length=163833
Score = 82.4 bits (90), Expect = 7e-11
Identities = 276/421 (66%), Gaps = 19/421 (5%)
Strand=Plus/Plus
Query 126046 GTGGAAGGCGTGTTTTTCTCGGGTAGTTTTGCGGCTAttttttttATAAAGACAAAGGGT 126105
||||| ||| | || |||||||| |||||| | || || | | |||| |||
Sbjct 12449 GTGGAGGGCATCTTCTTCTCGGGCTCGTTTGCGTCGATCTTCTGGCTGAAGAAGCGTGGT 12508
Query 126106 ATAATGCCCGGTCTAACGTTCAGCAACGAGTTGATTTCTCGTGACGAAGGACTCCATACG 126165
| ||||| ||||| ||||| |||||| | ||| | |||||||| || || || ||
Sbjct 12509 CTCATGCCGGGTCTGTCGTTCTCGAACGAGCTTATTACCCGTGACGAGGGTCTGCACACC 12568
Query 126166 GACTTTGCATGTCTGTATTACAATAATTATATACCCGAAAATGAAAAGTTGTCTGC-TGA 126224
|||||||| || || | || | | || ||| ||| | | | | |||
Sbjct 12569 GACTTTGCGTGCTTGCTGTTCAGTCA-------CCTGAA---GAAGCGCTCGCACCCTGA 12618
Query 126225 CGAAATTTTAA--GTATGTTCATCGAAGCTGTCAACATTGAAAAGGAATTCTTTACGTCG 126282
| | | || | || | | ||| |||||| || || ||||| || || ||| |
Sbjct 12619 C--ACGGTCAACCGCATCATTACCGAGGCTGTCTCGATCGAGAAGGACTTTTTGACGGAG 12676
Query 126283 GCGCTGCCATGCGATATGT-TGGGAATGAATTCTACAGCGATGTGCGAATATATAGAGTT 126341
|| ||||| || | | | || |||||| || |||||| | || || |||||
Sbjct 12677 GCTCTGCC-TGTGTCGCTTATCGGCATGAATGCTCGTCTCATGTGCCAGTACATTGAGTT 12735
Query 126342 CGTAGCGGACCGTTTGCTCGTCGAATTACGACAACC-GAAACACTTTAATACACCCAATC 126400
|| || |||||| |||| |||| | || ||||| ||| |||| | | | ||||
Sbjct 12736 TGTGGCCGACCGTCTGCTGGTCGCTCT-CGGCAACCCGAAGCACTACCACTCGACGAATC 12794
Query 126401 CATTTAACTTTATGAACAATATTTCTCTCGAGGGAAAGACTAACTTTTTCGAGAGACGTG 126460
||||| |||||||| | || || || || |||| ||| | |||||||||||| | ||||
Sbjct 12795 CATTTGACTTTATGGAGAACATCTCGCTGCAGGGCAAGTCGAACTTTTTCGAGCGTCGTG 12854
Query 126461 T 126461
|
Sbjct 12855 T 12855
>seq1
Length=1489072
Score = 82.4 bits (90), Expect = 7e-11
Identities = 111/155 (72%), Gaps = 0/155 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||| ||||| | || || || || || || || || |||||||| || || || |
Sbjct 830839 ATGCAAATCTTCGTCAAGACTCTGACTGGCAAGACGATCACGCTCGAGGTTGAGTCCTCG 830780
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || |||||||| ||||| || || || ||||| || |||
Sbjct 830779 GACACGATCGACAATGTGAAGGCCAAGATCCAGGACAAGGAGGGTATTCCTCCGGACCAA 830720
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGA 24858
|| ||| | || || || || || |||||||||||
Sbjct 830719 CAGCGTCTCATTTTCGCTGGTAAGCAGCTGGAGGA 830685
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449897088241480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |