Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Malassezia_20pachydermatis_20[genbank_20GCA_5F001278385.1_202015-09-
02] 91 sequences; 8,150,648 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq11 174 2e-37
seq40 114 2e-19
seq1 100 5e-15
>seq11
Length=163833
Score = 174 bits (192), Expect = 2e-37
Identities = 188/249 (76%), Gaps = 0/249 (0%)
Strand=Plus/Minus
Query 793892 GACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAG 793951
||| || ||||||||||| ||| |||| || |||||||||||||| | |||||||| ||
Sbjct 12880 GACACCAGCCTTGGCATAGTCGGCCACACGACGCTCGAAAAAGTTCGACTTGCCCTGCAG 12821
Query 793952 CGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGAG 794011
|||||| |||||| | || || || | || ||||||||||| | |||||
Sbjct 12820 CGAGATGTTCTCCATAAAGTCAAATGGATTCGTCGAGTGGTAGTGCTTCGGGTTGCCGAG 12761
Query 794012 CGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCAT 794071
| | ||||| |||||||| || || |||||||||||||||||||| || |||||
Sbjct 12760 AGCGACCAGCAGACGGTCGGCCACAAACTCAATGTACTGGCACATGAGACGAGCATTCAT 12701
Query 794072 GCCGATGAGCGCCACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCCTC 794131
|||||| |||| ||| ||||| | ||| | | ||| || ||||||||| ||| |||||
Sbjct 12700 GCCGATAAGCGACACAGGCAGAGCCTCCGTCAAAAAGTCCTTCTCGATCGAGACAGCCTC 12641
Query 794132 GATGATGAT 794140
| | |||||
Sbjct 12640 GGTAATGAT 12632
Score = 141 bits (156), Expect = 1e-27
Identities = 210/294 (71%), Gaps = 9/294 (3%)
Strand=Plus/Minus
Query 794377 AGGCCGGGCATGAGGCCGCGCTTCTTGAGCCAAAAGATGGCACAGAAACT-GCCCGAGAA 794435
|| || |||||||| || |||||||| ||||| ||||| | || |||| |||||||||
Sbjct 12522 AGACCCGGCATGAGACCACGCTTCTTCAGCCAGAAGATCG-ACGCAAACGAGCCCGAGAA 12464
Query 794436 AAAGATGCCCTCGACGGCGGCAAAGCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTC 794495
||||||||||| ||||||||||| | || || ||||| | || | |||| | |
Sbjct 12463 GAAGATGCCCTCCACGGCGGCAAACGCCACAAGGCGCTCCGAGAACG-----AGGCACGC 12409
Query 794496 TTTGTTG--ATCCACTTCATCGCCCACTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCG 794553
|| | ||||| | |||||||| ||||| | | |||| ||| | || |||
Sbjct 12408 TTGTCCGCAATCCAGCGAAGGGCCCACTCGGCCTTCTGCTTCACAACGGGAATGGTCTCG 12349
Query 794554 ATGGCGCGAAAGAGGTGGTCCTTCTCGACCGGGTCCTTGACGTAGGTGTCGATGAGGAGC 794613
|| ||| || |||| || || ||| ||| || ||| ||||||||||| |||
Sbjct 12348 ATAGCGTTGAACAGGTACTCGCGCTGCGCCGTGTCGCGGATGTACGTGTCGATGAGCAGC 12289
Query 794614 GAGTAGGTCTCTGAGTGGATGTTTTCGATGGCGATCTGGAAGCCATAAAAGCAG 794667
||||||||||| ||||| ||||| || || |||||||| || || ||||||
Sbjct 12288 GAGTAGGTCTCCGAGTGAATGTTCTCCATCATAATCTGGAAACCGTAGAAGCAG 12235
Score = 136 bits (150), Expect = 6e-26
Identities = 179/243 (74%), Gaps = 5/243 (2%)
Strand=Plus/Minus
Query 796150 GCCTCGGGTACTTGGACCTCCTTCATGAAGCGGCCGGCCAGGTTCTCAGCCACGATGCCG 796209
||||| | || || || || || |||| || | ||||||||| ||| || |||
Sbjct 12231 GCCTCCGCCACCTGCACTTCGTTGCTGAAACGCTCCAACAGGTTCTCGTTCACAATACCG 12172
Query 796210 TCGCTGGCGGCGAAAAAGGCGAGGACGTGCTTGATAAAGTGACGCTCGTCGTCGCTGA-G 796268
|| |||||||| || || |||||| | | |||||||||||||| |||| | | |
Sbjct 12171 TCCGACGCGGCGAAGAACGCAAGGACGGTACTCACAAAGTGACGCTCGTTGTCGTTCATG 12112
Query 796269 CGA--GACCCAGTGGACCGTGTCGG-CGCCGAGGTCGACCTCCTCGGCGGTCCAAAAGGA 796325
|| | |||||| | | ||| || | || ||||||||||| |||||||| || ||
Sbjct 12111 CGGTTGTCCCAGTCGTGCAAGTCCTTCGAC-AGATCGACCTCCTCAGCGGTCCAGAACGA 12053
Query 796326 GGCCTCGGCCTTTTTGTACATCTCCCATATCCGTTGGTAGCGGATGGGGAACAGAACAAA 796385
|||||| ||||| ||||||||| |||| ||| ||||||||||| |||||||| |||||
Sbjct 12052 GGCCTCAGCCTTCTTGTACATCGCCCAGATCTCGTGGTAGCGGATCGGGAACAGCACAAA 11993
Query 796386 GCG 796388
|||
Sbjct 11992 GCG 11990
>seq40
Length=1303022
Score = 114 bits (126), Expect = 2e-19
Identities = 177/253 (70%), Gaps = 0/253 (0%)
Strand=Plus/Plus
Query 1485473 ACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCATGA 1485532
|||||||||| | ||| |||| | | ||| ||| ||| ||| || ||| | | |
Sbjct 399565 ACTTGGTGACCGAGCGAGTAGCCTCGGCAATGGCATGCTTGGACAGCTCACCGGGGAGAA 399624
Query 1485533 TCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCGCG 1485592
|||| || || || ||||||||||| || | || ||| | |||||| || |
Sbjct 399625 TCAGACGAACAGCAGTCTGGATCTCACGCGACGAAATGGTGCTCTTCTTGTTGTAGCTGG 399684
Query 1485593 CCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGA 1485652
| || |||||||||| ||||||| |||| ||||| | || |||||||| | ||
Sbjct 399685 CGAGCTTCGAGGCCTCGGTGGCGATGCGCTCGAAAATGTCCTGCACGAACGAGTTGAGGA 399744
Query 1485653 TCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGTAAA 1485712
| | ||| | ||||| ||||| || ||| |||||||||||||||||||| |||||
Sbjct 399745 TAGCCATGGCCTTGTTCGAGATACCAGTGTCCGGGTGCACCTGCTTGAGCACACGGTAAA 399804
Query 1485713 CAAAGGACGAGTA 1485725
||| ||||||
Sbjct 399805 TGTAGGTCGAGTA 399817
Score = 91.5 bits (100), Expect = 2e-12
Identities = 120/163 (74%), Gaps = 4/163 (2%)
Strand=Plus/Plus
Query 431020 CGCCCGAGAGCCGCGGCTTTGTGCGCAACTCGTACGAGCGCGGCCTCAACTCGCGCGAGA 431079
||||||||||||| || |||||| |||||||| ||| || |||| | | ||||
Sbjct 1284556 CGCCCGAGAGCCGTGGATTTGTGGAGAACTCGTATTTGCGTGGTCTCACAGCCCACGAG- 1284614
Query 431080 TGTTTCTGCACATG--ATCGGCGGGCGCGAGGGTCTCGTCGACACGGCCGTCAAGACGGC 431137
| ||||| | |||| || | ||| || || ||||| |||| || || || ||||||||
Sbjct 1284615 TTTTTCTTC-CATGCCATGGCCGGTCGTGAAGGTCTGATCGATACAGCTGTGAAGACGGC 1284673
Query 431138 CGAGACGGGCTACATCCAGCGTCGGTGCATCAAATCGATGGAG 431180
|||||| || ||||| || ||||| | |||| || |||||
Sbjct 1284674 CGAGACTGGTTACATTCAACGTCGTCTCGTCAAGGCGCTGGAG 1284716
>seq1
Length=1489072
Score = 100 bits (110), Expect = 5e-15
Identities = 76/90 (84%), Gaps = 0/90 (0%)
Strand=Plus/Plus
Query 2175301 GGCACGACCCGTCGAGGTCGGGGTCGCTGGCCAGGCCCTTCCACCCGACGGTCGTGCGCG 2175360
|| |||| ||||||||||| |||||| || || |||||||| || |||||||||||||
Sbjct 792074 GGTACGAGCCGTCGAGGTCAGGGTCGTTGATGAGACCCTTCCAGCCCACGGTCGTGCGCG 792133
Query 2175361 GCTTTTCGACATAGGCGCGCATGACCACCA 2175390
|||| |||| ||||||||||| |||||||
Sbjct 792134 GCTTCTCGAAGTAGGCGCGCATAACCACCA 792163
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7916236719914949
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |