Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20pachydermatis_20[genbank_20GCA_5F001278385.1_202015-09- 02] 91 sequences; 8,150,648 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq11 174 2e-37 seq40 114 2e-19 seq1 100 5e-15 >seq11 Length=163833 Score = 174 bits (192), Expect = 2e-37 Identities = 188/249 (76%), Gaps = 0/249 (0%) Strand=Plus/Minus Query 793892 GACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAG 793951 ||| || ||||||||||| ||| |||| || |||||||||||||| | |||||||| || Sbjct 12880 GACACCAGCCTTGGCATAGTCGGCCACACGACGCTCGAAAAAGTTCGACTTGCCCTGCAG 12821 Query 793952 CGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGAG 794011 |||||| |||||| | || || || | || ||||||||||| | ||||| Sbjct 12820 CGAGATGTTCTCCATAAAGTCAAATGGATTCGTCGAGTGGTAGTGCTTCGGGTTGCCGAG 12761 Query 794012 CGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCAT 794071 | | ||||| |||||||| || || |||||||||||||||||||| || ||||| Sbjct 12760 AGCGACCAGCAGACGGTCGGCCACAAACTCAATGTACTGGCACATGAGACGAGCATTCAT 12701 Query 794072 GCCGATGAGCGCCACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCCTC 794131 |||||| |||| ||| ||||| | ||| | | ||| || ||||||||| ||| ||||| Sbjct 12700 GCCGATAAGCGACACAGGCAGAGCCTCCGTCAAAAAGTCCTTCTCGATCGAGACAGCCTC 12641 Query 794132 GATGATGAT 794140 | | ||||| Sbjct 12640 GGTAATGAT 12632 Score = 141 bits (156), Expect = 1e-27 Identities = 210/294 (71%), Gaps = 9/294 (3%) Strand=Plus/Minus Query 794377 AGGCCGGGCATGAGGCCGCGCTTCTTGAGCCAAAAGATGGCACAGAAACT-GCCCGAGAA 794435 || || |||||||| || |||||||| ||||| ||||| | || |||| ||||||||| Sbjct 12522 AGACCCGGCATGAGACCACGCTTCTTCAGCCAGAAGATCG-ACGCAAACGAGCCCGAGAA 12464 Query 794436 AAAGATGCCCTCGACGGCGGCAAAGCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTC 794495 ||||||||||| ||||||||||| | || || ||||| | || | |||| | | Sbjct 12463 GAAGATGCCCTCCACGGCGGCAAACGCCACAAGGCGCTCCGAGAACG-----AGGCACGC 12409 Query 794496 TTTGTTG--ATCCACTTCATCGCCCACTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCG 794553 || | ||||| | |||||||| ||||| | | |||| ||| | || ||| Sbjct 12408 TTGTCCGCAATCCAGCGAAGGGCCCACTCGGCCTTCTGCTTCACAACGGGAATGGTCTCG 12349 Query 794554 ATGGCGCGAAAGAGGTGGTCCTTCTCGACCGGGTCCTTGACGTAGGTGTCGATGAGGAGC 794613 || ||| || |||| || || ||| ||| || ||| ||||||||||| ||| Sbjct 12348 ATAGCGTTGAACAGGTACTCGCGCTGCGCCGTGTCGCGGATGTACGTGTCGATGAGCAGC 12289 Query 794614 GAGTAGGTCTCTGAGTGGATGTTTTCGATGGCGATCTGGAAGCCATAAAAGCAG 794667 ||||||||||| ||||| ||||| || || |||||||| || || |||||| Sbjct 12288 GAGTAGGTCTCCGAGTGAATGTTCTCCATCATAATCTGGAAACCGTAGAAGCAG 12235 Score = 136 bits (150), Expect = 6e-26 Identities = 179/243 (74%), Gaps = 5/243 (2%) Strand=Plus/Minus Query 796150 GCCTCGGGTACTTGGACCTCCTTCATGAAGCGGCCGGCCAGGTTCTCAGCCACGATGCCG 796209 ||||| | || || || || || |||| || | ||||||||| ||| || ||| Sbjct 12231 GCCTCCGCCACCTGCACTTCGTTGCTGAAACGCTCCAACAGGTTCTCGTTCACAATACCG 12172 Query 796210 TCGCTGGCGGCGAAAAAGGCGAGGACGTGCTTGATAAAGTGACGCTCGTCGTCGCTGA-G 796268 || |||||||| || || |||||| | | |||||||||||||| |||| | | | Sbjct 12171 TCCGACGCGGCGAAGAACGCAAGGACGGTACTCACAAAGTGACGCTCGTTGTCGTTCATG 12112 Query 796269 CGA--GACCCAGTGGACCGTGTCGG-CGCCGAGGTCGACCTCCTCGGCGGTCCAAAAGGA 796325 || | |||||| | | ||| || | || ||||||||||| |||||||| || || Sbjct 12111 CGGTTGTCCCAGTCGTGCAAGTCCTTCGAC-AGATCGACCTCCTCAGCGGTCCAGAACGA 12053 Query 796326 GGCCTCGGCCTTTTTGTACATCTCCCATATCCGTTGGTAGCGGATGGGGAACAGAACAAA 796385 |||||| ||||| ||||||||| |||| ||| ||||||||||| |||||||| ||||| Sbjct 12052 GGCCTCAGCCTTCTTGTACATCGCCCAGATCTCGTGGTAGCGGATCGGGAACAGCACAAA 11993 Query 796386 GCG 796388 ||| Sbjct 11992 GCG 11990 >seq40 Length=1303022 Score = 114 bits (126), Expect = 2e-19 Identities = 177/253 (70%), Gaps = 0/253 (0%) Strand=Plus/Plus Query 1485473 ACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCATGA 1485532 |||||||||| | ||| |||| | | ||| ||| ||| ||| || ||| | | | Sbjct 399565 ACTTGGTGACCGAGCGAGTAGCCTCGGCAATGGCATGCTTGGACAGCTCACCGGGGAGAA 399624 Query 1485533 TCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCGCG 1485592 |||| || || || ||||||||||| || | || ||| | |||||| || | Sbjct 399625 TCAGACGAACAGCAGTCTGGATCTCACGCGACGAAATGGTGCTCTTCTTGTTGTAGCTGG 399684 Query 1485593 CCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGA 1485652 | || |||||||||| ||||||| |||| ||||| | || |||||||| | || Sbjct 399685 CGAGCTTCGAGGCCTCGGTGGCGATGCGCTCGAAAATGTCCTGCACGAACGAGTTGAGGA 399744 Query 1485653 TCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGTAAA 1485712 | | ||| | ||||| ||||| || ||| |||||||||||||||||||| ||||| Sbjct 399745 TAGCCATGGCCTTGTTCGAGATACCAGTGTCCGGGTGCACCTGCTTGAGCACACGGTAAA 399804 Query 1485713 CAAAGGACGAGTA 1485725 ||| |||||| Sbjct 399805 TGTAGGTCGAGTA 399817 Score = 91.5 bits (100), Expect = 2e-12 Identities = 120/163 (74%), Gaps = 4/163 (2%) Strand=Plus/Plus Query 431020 CGCCCGAGAGCCGCGGCTTTGTGCGCAACTCGTACGAGCGCGGCCTCAACTCGCGCGAGA 431079 ||||||||||||| || |||||| |||||||| ||| || |||| | | |||| Sbjct 1284556 CGCCCGAGAGCCGTGGATTTGTGGAGAACTCGTATTTGCGTGGTCTCACAGCCCACGAG- 1284614 Query 431080 TGTTTCTGCACATG--ATCGGCGGGCGCGAGGGTCTCGTCGACACGGCCGTCAAGACGGC 431137 | ||||| | |||| || | ||| || || ||||| |||| || || || |||||||| Sbjct 1284615 TTTTTCTTC-CATGCCATGGCCGGTCGTGAAGGTCTGATCGATACAGCTGTGAAGACGGC 1284673 Query 431138 CGAGACGGGCTACATCCAGCGTCGGTGCATCAAATCGATGGAG 431180 |||||| || ||||| || ||||| | |||| || ||||| Sbjct 1284674 CGAGACTGGTTACATTCAACGTCGTCTCGTCAAGGCGCTGGAG 1284716 >seq1 Length=1489072 Score = 100 bits (110), Expect = 5e-15 Identities = 76/90 (84%), Gaps = 0/90 (0%) Strand=Plus/Plus Query 2175301 GGCACGACCCGTCGAGGTCGGGGTCGCTGGCCAGGCCCTTCCACCCGACGGTCGTGCGCG 2175360 || |||| ||||||||||| |||||| || || |||||||| || ||||||||||||| Sbjct 792074 GGTACGAGCCGTCGAGGTCAGGGTCGTTGATGAGACCCTTCCAGCCCACGGTCGTGCGCG 792133 Query 2175361 GCTTTTCGACATAGGCGCGCATGACCACCA 2175390 |||| |||| ||||||||||| ||||||| Sbjct 792134 GCTTCTCGAAGTAGGCGCGCATAACCACCA 792163 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916236719914949