Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Malassezia_20pachydermatis_20[genbank_20GCA_5F001278385.1_202015-09-
02] 91 sequences; 8,150,648 total letters
Query= NC_024446.1
Length=306862
Score E
Sequences producing significant alignments: (Bits) Value
seq68 116 7e-21
seq53 109 1e-18
seq1 87.8 4e-12
>seq68
Length=564861
Score = 116 bits (128), Expect = 7e-21
Identities = 165/232 (71%), Gaps = 0/232 (0%)
Strand=Plus/Plus
Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641
|||| || | || ||| ||||| | ||| ||||| || ||||| || || || ||
Sbjct 518172 TACCACCGCGCAGACGGAGAACCAGGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGC 518231
Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701
||| | | || || || | || || ||||||||||| | | |||||| || ||||
Sbjct 518232 TCAGAGTGCGCCCATCCTCCAACTGCTTACCAGCAAAGATCAAGCGTTGTTGGTCCGGAG 518291
Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761
| || |||||||| || || ||||| || || ||||| || ||||| || || || |
Sbjct 518292 GAATACCTTCCTTGTCCTGGATCTTAGCCTTCACATTGTCGATCGTGTCTGAAGACTCCA 518351
Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATTAT 82813
| |||| || ||||||||||| || | |||||| || || || ||||| ||
Sbjct 518352 CCTCCAGGGTGATCGTCTTGCCAGTGAGCGTCTTAACGAAAATTTGCATGAT 518403
Score = 95.1 bits (104), Expect = 2e-14
Identities = 150/215 (70%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655
|| || || ||||| ||||| || ||||| || || || ||| | | | | ||
Sbjct 517958 CGAAGCACCAAGTGAAGAGTGCTCTCCTTCTGAATGTTGTAGTCACTCAAAGTACGGCCA 518017
Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715
|| || | || || ||||| || || || | ||||| || ||||| || ||||||||
Sbjct 518018 TCCTCCAACTGCTTACCAGCGAAAATAAGACGCTGTTGGTCGGGAGGAATACCTTCCTTG 518077
Query 82716 TCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATC 82775
|| || ||||| || || ||||| || ||||| || || || || |||| || |||
Sbjct 518078 TCCTGGATCTTAGCCTTCACATTGTCGATCGTGTCTGAAGACTCCACCTCCAGGGTGATC 518137
Query 82776 GTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|||||||| || | ||||| || || || |||||
Sbjct 518138 GTCTTGCCAGTAAGAGTCTTGACGAAGATTTGCAT 518172
>seq53
Length=642545
Score = 109 bits (120), Expect = 1e-18
Identities = 108/140 (77%), Gaps = 0/140 (0%)
Strand=Plus/Plus
Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655
||||| || | |||||| || |||||| || || ||||| ||| || | | |||
Sbjct 498946 CGCAGTACCAGGTGCAGGGTGCTTTCTTTTTGGATGTTATAGTCACTGAGTGTACGCCCG 499005
Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715
|| ||||| || ||||| |||||||| || | |||||||| ||||| ||||| |||||
Sbjct 499006 TCCTCTAGCTGCTTTCCGGCAAAGATCAGACGCTGTTGATCCGGAGGAATTCCCTCCTTG 499065
Query 82716 TCTTGAATCTTTGCTTTTAC 82735
||||||||||||||||| ||
Sbjct 499066 TCTTGAATCTTTGCTTTGAC 499085
>seq1
Length=1489072
Score = 87.8 bits (96), Expect = 4e-12
Identities = 114/158 (72%), Gaps = 0/158 (0%)
Strand=Plus/Plus
Query 82653 CCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCC 82712
||||| || || || || ||||| || || || | ||||| || ||||| || || |||
Sbjct 830682 CCGTCCTCCAGCTGCTTACCAGCGAAAATGAGACGCTGTTGGTCCGGAGGAATACCCTCC 830741
Query 82713 TTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTT 82772
|| || || ||||| || || ||||| || ||||| || | || || || | ||
Sbjct 830742 TTGTCCTGGATCTTGGCCTTCACATTGTCGATCGTGTCCGAGGACTCAACCTCGAGCGTG 830801
Query 82773 ATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
||||||||||| |||| ||||| || || || |||||
Sbjct 830802 ATCGTCTTGCCAGTCAGAGTCTTGACGAAGATTTGCAT 830839
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 981826055250849
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |