Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20pachydermatis_20[genbank_20GCA_5F001278385.1_202015-09- 02] 91 sequences; 8,150,648 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq11 201 1e-46 seq53 118 1e-21 seq68 116 4e-21 >seq11 Length=163833 Score = 201 bits (222), Expect = 1e-46 Identities = 536/800 (67%), Gaps = 37/800 (5%) Strand=Plus/Minus Query 120372 CTCAAAAAAGTTTGTTTTGCCCTCCATCGAAATGTTGTTCATAAACTCGAACGGGTTGCT 120431 ||| |||||||| | ||||||| || ||| ||||| | |||||| || || || || | Sbjct 12847 CTCGAAAAAGTTCGACTTGCCCTGCAGCGAGATGTTCTCCATAAAGTCAAATGGATTCGT 12788 Query 120432 CGCGTTAAAGTATTTCGGCTGGCCCAACTGTACGAGCAGTCGGTCCGCTACAAACTCAAT 120491 || || ||| ||||| | ||| | || ||||| ||||| || ||||||||||| Sbjct 12787 CGAGTGGTAGTGCTTCGGGTTGCCGAGAGCGACCAGCAGACGGTCGGCCACAAACTCAAT 12728 Query 120492 GTACTCGCACATG-GACTGCGCGTTCATGCCCAGCAACGCCACCGGCAACGCCGACGTGA 120550 ||||| ||||||| ||| | || |||||||| | | || ||| |||| ||| ||| | Sbjct 12727 GTACTGGCACATGAGAC-GAGCATTCATGCCGATAAGCGACACAGGCAGAGCCTCCGTCA 12669 Query 120551 AAAACTCCTTCTCAATGTCCACCGCCTCCTTGAACATGGCGAGCATAGTGTGGCCGGGCA 120610 |||| |||||||| || || ||||| | | || ||| || || ||| | Sbjct 12668 AAAAGTCCTTCTCGATCGAGACAGCCTCGGTAATGAT-GCG------GT-TGACCGTG-- 12619 Query 120611 TCTTGTGTTCGATGCGC--GTTC-GGT---AGTACAG---GCACGCAAAGTCCGTGTGCA 120661 || | || ||| |||| ||| ||| | |||| |||||||||||| ||||||| Sbjct 12618 TC-AGGGTGCGA-GCGCTTCTTCAGGTGACTGAACAGCAAGCACGCAAAGTCGGTGTGCA 12561 Query 120662 GGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTCAGGCCGGGCATGATGCCTTTCG 120721 | |||||||| || | || |||||||| |||| ||| || ||||||| || | Sbjct 12560 GACCCTCGTCACGGGTAATAAGCTCGTTCGAGAACGACAGACCCGGCATGAGACCACGCT 12501 Query 120722 TCTTGATGTAGAATATGGCGGCAAAGCTGCCCGAAAAGAACACGCCCTCCACGATGGCAA 120781 |||| | |||| || | ||||| |||||| ||||| | |||||||||| ||||| Sbjct 12500 TCTTCAGCCAGAAGATCGACGCAAACGAGCCCGAGAAGAAGATGCCCTCCACGGCGGCAA 12441 Query 120782 AGGCGACCATGCGCTCGGCCAACGTCGCCGTCTTGCTGTCGATCCACTTCATGGCCCACT 120841 | || || | |||||| | |||| || |||| | ||||| | |||||||| Sbjct 12440 ACGCCACAAGGCGCTCCGAGAACGAGGCACGCTTGTCCGCAATCCAGCGAAGGGCCCACT 12381 Query 120842 CGGCCTTTTTGCGCACGCACGGCATCCGCTCGAACGCGTTCAGCAGCATGTCGCGCT-CG 120900 ||||||| | ||| || || ||||| ||||| | ||| ||||||| || Sbjct 12380 CGGCCTTCTGCTTCACAACGGGAATGGTCTCGATAGCGTTGAACAGGTACTCGCGCTGCG 12321 Query 120901 CCCTCCTCCGCAATCAGCTGATGGATGAGCAGATTGTACATTTCCGTGTGCACGCACTCG 120960 || | || | | || | ||||||||| ||| | |||| ||| | | ||| Sbjct 12320 CCGTGTCGCGGATGTACGTG-TCGATGAGCAGCGAGTAGGTCTCCGAGTGAATGTTCTCC 12262 Query 120961 ATCAGCACTTGCTGGTTGTAAAAGTACTGCGCCTCCAGCTCGGGCACCGCCCGCTGCATG 121020 |||| | || ||| ||| | | |||||| | | |||| || ||| || Sbjct 12261 ATCATAATCTGGAAACCGTAGAAGCAGCGAGCCTCCGCCACCTGCAC--TTCGTTGC-TG 12205 Query 121021 TA---CTCGATAAGGTTAATATTCACGATACTGTCGGCGGCGGCGAAGAACGCCAGCACG 121077 | ||| | ||||| ||||| |||| ||| | |||||||||||||| || ||| Sbjct 12204 AAACGCTCCAACAGGTTCTCGTTCACAATACCGTCCGACGCGGCGAAGAACGCAAGGACG 12145 Query 121078 TGCTTGATAAAGTGTCGCTC---GTCGTCCGTGAGCTTGTGCGCAAAATCGTCATAGTCC 121134 | | |||||| ||||| ||||| | || | |||| | | |||| ||||| Sbjct 12144 GTACTCACAAAGTGACGCTCGTTGTCGTTCATGCGGTTGT---CCCAGTCGTGCAAGTCC 12088 Query 121135 TTGGACAGGTCGACCTCCTC 121154 || ||||| ||||||||||| Sbjct 12087 TTCGACAGATCGACCTCCTC 12068 >seq53 Length=642545 Score = 118 bits (130), Expect = 1e-21 Identities = 149/202 (74%), Gaps = 2/202 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| || ||||| |||| || ||| | | | |||||||||||||| || Sbjct 401317 GTCGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCA-TCCTCGAGCTGCTTACC 401259 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | || || ||||| ||||| ||||| || || |||||||| |||||| ||| Sbjct 401258 AGCGAAGATCAGGCGCTGTTGGTCCGGAGGAATACCCTCCTTGTCCTGGATCTTGGCCTT 401199 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | | ||| | |||||||| | |||||| || | ||||| || || ||||| || || Sbjct 401198 CACATTCTCGATCGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTCCCGGTGAGGGT 401139 Query 133643 TTTTACGAAAATCTGCATGGCT 133664 || ||||| | ||||| ||| Sbjct 401138 CTTGACGAACACTTGCATAGCT 401117 >seq68 Length=564861 Score = 116 bits (128), Expect = 4e-21 Identities = 143/193 (74%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 133469 CTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCCCGCGT 133527 ||| ||||| || ||||| |||| || ||| | | | ||||| |||||||| || ||| Sbjct 517753 CTCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCA-TCCTCCAGCTGCTTACCAGCGA 517811 Query 133528 AAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCT 133587 |||| || ||||| ||||| || || ||||| |||||||| |||||| ||||| | Sbjct 517812 AAATAAGACGCTGTTGGTCCGGTGGAATGCCCTCCTTGTCCTGGATCTTAGCCTTGACGT 517871 Query 133588 GCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTA 133647 |||| |||||| | || || || || | || | ||||| || || ||||| || | Sbjct 517872 TATCAATCGTGTCCGAGGATTCGACTTCCAATGTAATAGTTTTACCAGTAAGAGTCTTGA 517931 Query 133648 CGAAAATCTGCAT 133660 ||||||||||||| Sbjct 517932 CGAAAATCTGCAT 517944 Score = 107 bits (118), Expect = 2e-18 Identities = 141/193 (73%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 133469 CTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCCCGCGT 133527 ||| ||||| || ||||| || | || || | | | ||||| | |||||| || ||| Sbjct 517981 CTCCTTCTGAATGTTGTAGTCACTCAAAGTACGGCCA-TCCTCCAACTGCTTACCAGCGA 518039 Query 133528 AAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCT 133587 |||| || ||||| ||||||||||| || ||||||||||| |||||| ||| | | Sbjct 518040 AAATAAGACGCTGTTGGTCGGGAGGAATACCTTCCTTGTCCTGGATCTTAGCCTTCACAT 518099 Query 133588 GCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTA 133647 || | |||||| | | |||||| || | ||||| || ||||| || ||||| || | Sbjct 518100 TGTCGATCGTGTCTGAAGACTCCACCTCCAGGGTGATCGTCTTGCCAGTAAGAGTCTTGA 518159 Query 133648 CGAAAATCTGCAT 133660 |||| || ||||| Sbjct 518160 CGAAGATTTGCAT 518172 Score = 96.9 bits (106), Expect = 3e-15 Identities = 137/193 (71%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 133469 CTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCCGCGTA 133528 ||| ||||| || ||||| |||| || ||| | ||||| | |||||| || || | Sbjct 518209 CTCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGCCCATCCTCCAACTGCTTACCAGCAAA 518268 Query 133529 AATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCTG 133588 || | || || ||||| ||||| || ||||||||||| |||||| ||| | | Sbjct 518269 GATCAAGCGTTGTTGGTCCGGAGGAATACCTTCCTTGTCCTGGATCTTAGCCTTCACATT 518328 Query 133589 CTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTAC 133648 || | |||||| | | |||||| || | ||||| || ||||| || || || || || Sbjct 518329 GTCGATCGTGTCTGAAGACTCCACCTCCAGGGTGATCGTCTTGCCAGTGAGCGTCTTAAC 518388 Query 133649 GAAAATCTGCATG 133661 |||||| |||||| Sbjct 518389 GAAAATTTGCATG 518401 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483420250108840