Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20pachydermatis_20[genbank_20GCA_5F001278385.1_202015-09- 02] 91 sequences; 8,150,648 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq68 95.1 8e-15 seq1 89.7 3e-13 >seq68 Length=564861 Score = 95.1 bits (104), Expect = 8e-15 Identities = 160/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | || ||| | |||| || ||||||||||| || || |||||||| ||| Sbjct 518173 ACCACCGCGCAGACGGAGAACCAGGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCT 518232 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || ||||| | || ||||| || || || ||||| ||||| || || || || | || Sbjct 518233 CAGAGTGCGCCCATCCTCCAACTGCTTACCAGCAAAGATCAAGCGTTGTTGGTCCGGAGG 518292 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | |||||| ||||| || || ||| |||| ||| | ||||| || |||| Sbjct 518293 AATACCTTCCTTGTCCTGGATCTTAGCCTTC-ACATTGTCGATCGTGTCTGAAGACTCCA 518351 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | || | |||||||| || || || | ||| || || || || ||||| Sbjct 518352 CCTCCAGGGTGATCGTCTTGCCAGTGAGCGTCTTAACGAAAATTTGCAT 518400 Score = 84.2 bits (92), Expect = 1e-11 Identities = 158/230 (69%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | | || | |||||| || ||||||||||| || || |||||||| || Sbjct 517945 ACCACCACGAAGGCGAAGCACCAAGTGAAGAGTGCTCTCCTTCTGAATGTTGTAGTCACT 518004 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 | || || | || ||||| || || || || ||||| | |||||| || || | || Sbjct 518005 CAAAGTACGGCCATCCTCCAACTGCTTACCAGCGAAAATAAGACGCTGTTGGTCGGGAGG 518064 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | |||||| ||||| || || ||| |||| ||| | ||||| || |||| Sbjct 518065 AATACCTTCCTTGTCCTGGATCTTAGCCTTC-ACATTGTCGATCGTGTCTGAAGACTCCA 518123 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || | |||||||| || || || | || || || ||||| |||||| Sbjct 518124 CCTCCAGGGTGATCGTCTTGCCAGTAAGAGTCTTGACGAAGATTTGCATA 518173 >seq1 Length=1489072 Score = 89.7 bits (98), Expect = 3e-13 Identities = 148/211 (70%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 33540 CACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTC 33599 ||||| || ||||||||||| || || |||||||| ||| ||| ||||| |||| || Sbjct 830630 CACCAGGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTGAGGGTGCGGCCGTCCTC 830689 Query 33600 CAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGC 33659 || || || || || ||||| | |||||| || || | || | ||| || ||||| Sbjct 830690 CAGCTGCTTACCAGCGAAAATGAGACGCTGTTGGTCCGGAGGAATACCCTCCTTGTCCTG 830749 Query 33660 AATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTT 33718 || || ||| |||| ||| | ||||| || || || || | ||||||||| | Sbjct 830750 GATCTTGGCCTTC-ACATTGTCGATCGTGTCCGAGGACTCAACCTCGAGCGTGATCGTCT 830808 Query 33719 TACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | || || | || || || ||||| ||||| Sbjct 830809 TGCCAGTCAGAGTCTTGACGAAGATTTGCAT 830839 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328703635446720