Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20pachydermatis_20[genbank_20GCA_5F001278385.1_202015-09- 02] 91 sequences; 8,150,648 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq11 134 1e-26 seq53 86.0 6e-12 seq1 82.4 7e-11 >seq11 Length=163833 Score = 134 bits (148), Expect = 1e-26 Identities = 322/481 (67%), Gaps = 11/481 (2%) Strand=Plus/Plus Query 46776 AAGGCCCAGTGGGCCATGAAGTGGATCGAGAGCGAGACCGCCACGCTGGCCGAGCGCATG 46835 |||||| |||||||| | ||||| | | | || ||| || | | |||||| | Sbjct 12374 AAGGCCGAGTGGGCCCTTCGCTGGATTGCGGACAAGCGTGCCTCGTTCTCGGAGCGCCTT 12433 Query 46836 GTGGCATTCGCGATAGTCGAAGGCGTGtttttttCGGGCAGTTTTGCCGCCATTTTTTAC 46895 ||||| || || || || ||| | || || |||||| ||||| | || || | Sbjct 12434 GTGGCGTTTGCCGCCGTGGAGGGCATCTTCTTCTCGGGCTCGTTTGCGTCGATCTTCTGG 12493 Query 46896 ATTAAAACCAAAGGCATAATGCCGGGCCTGACGTTCAGTAACGAGTTGATCTCGCGCGAC 46955 | || | || | |||||||| ||| ||||| |||||| | || | || ||| Sbjct 12494 CTGAAGAAGCGTGGTCTCATGCCGGGTCTGTCGTTCTCGAACGAGCTTATTACCCGTGAC 12553 Query 46956 GAAGGACTACACACGGACTTTGCGTGTCT-CTATTACAAGACGCGCGTGAATGAGAAATT 47014 || || || ||||| ||||||||||| | || || | | | |||| || | Sbjct 12554 GAGGGTCTGCACACCGACTTTGCGTGCTTGCTGTTC----AGTCACCTGAAGAAGCGCTC 12609 Query 47015 AAACTCGGACACGATCCTGAGCATGTTTAGGGAGGCGGTGAGCATCGAAAAGGAGTTTTT 47074 || | |||||| || |||| ||| ||||| || ||||| ||||| ||||| Sbjct 12610 GCACCCTGACACGGTCAACCGCATCATTACCGAGGCTGTCTCGATCGAGAAGGACTTTTT 12669 Query 47075 TACTGCGGCGCTGCCCGTCGCCTTGCTGGGCATGAACGCACAGTCT-ATGTGCGAATATA 47133 || | ||| ||||| || | | | |||||||| || | |||| |||||| | || | Sbjct 12670 GACGGAGGCTCTGCCTGTGTCGCTTATCGGCATGAATGCTC-GTCTCATGTGCCAGTACA 12728 Query 47134 TTGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGGACAACCGAAATATTTTAATGCTC 47193 ||||||||||||| || |||||| |||| ||||| | ||||| | || ||| Sbjct 12729 TTGAGTTTGTGGCCGACCGTCTGCTGGTCGCTCTCGGCAACCCGAAGCA--CTACCACTC 12786 Query 47194 G--TAATCCGTTTGAGTTTATGAACAACATTTCGCTCGAGGGCAAAACCAATTTTTTCGA 47251 | ||||| ||||| |||||| | ||||| ||||| ||||||| | || |||||||| Sbjct 12787 GACGAATCCATTTGACTTTATGGAGAACATCTCGCTGCAGGGCAAGTCGAACTTTTTCGA 12846 Query 47252 G 47252 | Sbjct 12847 G 12847 >seq53 Length=642545 Score = 86.0 bits (94), Expect = 6e-12 Identities = 152/222 (68%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 131902 ACGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGT 131961 ||||| ||||| |||| || | | ||||| || || |||||||||||||||| ||| Sbjct 401342 ACGCAGGCGCAGCACCAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGGGT 401283 Query 131962 ACGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCC 132021 || ||| |||||||| ||||| | |||| || |||||||| || ||||| || || Sbjct 401282 GCGGCCATCCTCGAGCTGCTTACCAGCGAAGATCAGGCGCTGTTGGTCCGGAGGAATACC 401223 Query 132022 TTCTTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGAC 132081 || || || || || |||| | || | || |||| | |||||| || | Sbjct 401222 CTCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATCGTGTCGGAAGACTCCACCTCAAG 401163 Query 132082 CGTCAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 || | ||| || || || || || || | ||| | ||||| Sbjct 401162 GGTGATCGTCTTCCCGGTGAGGGTCTTGACGAACACTTGCAT 401121 >seq1 Length=1489072 Score = 82.4 bits (90), Expect = 7e-11 Identities = 134/193 (69%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 131932 CTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAATA 131991 ||| || || |||||||||||||| | ||| || || || ||||| ||||| | | Sbjct 830648 CTCCTTCTGGATGTTGTAGTCGCTGAGGGTGCGGCCGTCCTCCAGCTGCTTACCAGCGAA 830707 Query 131992 GATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAACTG 132051 || ||||||||||| || ||||| || || || || || || || |||| | Sbjct 830708 AATGAGACGCTGTTGGTCCGGAGGAATACCCTCCTTGTCCTGGATCTTGGCCTTCACATT 830767 Query 132052 TTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTAT 132111 || | || || | | ||| || |||| ||| | ||| || ||||||||||| || | Sbjct 830768 GTCGATCGTGTCCGAGGACTCAACCTCGAGCGTGATCGTCTTGCCAGTCAGAGTCTTGAC 830827 Query 132112 GAAAATCTGCATG 132124 ||| || |||||| Sbjct 830828 GAAGATTTGCATG 830840 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476610657854760