Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20pachydermatis_20[genbank_20GCA_5F001278385.1_202015-09- 02] 91 sequences; 8,150,648 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq68 107 2e-18 seq53 100 3e-16 seq1 100 3e-16 >seq68 Length=564861 Score = 107 bits (118), Expect = 2e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564 || ||||| |||||| ||||| || ||||||||||||| | ||| | || || Sbjct 517736 ACAAGGTGCAGCGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCATCCTCC 517795 Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624 ||||| || || || ||||| | |||||| || || || || ||||| || || || || Sbjct 517796 AGCTGCTTACCAGCGAAAATAAGACGCTGTTGGTCCGGTGGAATGCCCTCCTTGTCCTGG 517855 Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684 || || ||||| || | ||||| || ||||| || || | ||||| |||||| Sbjct 517856 ATCTTAGCCTTGACGTTATCAATCGTGTCCGAGGATTCGACTTCCAATGTAATAGTTTTA 517915 Query 134685 CCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || | ||| || |||||||| ||||| Sbjct 517916 CCAGTAAGAGTCTTGACGAAAATCTGCAT 517944 Score = 93.3 bits (102), Expect = 4e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564 || ||||| || ||| ||||| || ||||||||||||| | ||| | || || Sbjct 518192 ACCAGGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGCCCATCCTCC 518251 Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624 | ||| || || ||||| ||||| || || || || || || || ||||| || || || Sbjct 518252 AACTGCTTACCAGCAAAGATCAAGCGTTGTTGGTCCGGAGGAATACCTTCCTTGTCCTGG 518311 Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684 || || || || ||| | ||||| || || ||||| || || || || || || Sbjct 518312 ATCTTAGCCTTCACATTGTCGATCGTGTCTGAAGACTCCACCTCCAGGGTGATCGTCTTG 518371 Query 134685 CCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || | || ||||||||||||||||| Sbjct 518372 CCAGTGAGCGTCTTAACGAAAATTTGCAT 518400 Score = 87.8 bits (96), Expect = 2e-12 Identities = 150/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || || | ||| | ||| || ||| ||||| |||||||||||||| | | || | Sbjct 517955 AGGCGAAGCACCAAGTGAAGAGTGCTCTCCTTCTGAATGTTGTAGTCACTCAAAGTACGG 518014 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 || || | ||| || || || ||||| | |||||| || ||||| || || ||||| Sbjct 518015 CCATCCTCCAACTGCTTACCAGCGAAAATAAGACGCTGTTGGTCGGGAGGAATACCTTCC 518074 Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675 || || || || || || || ||| | ||||| || || ||||| || || || Sbjct 518075 TTGTCCTGGATCTTAGCCTTCACATTGTCGATCGTGTCTGAAGACTCCACCTCCAGGGTG 518134 Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || || || | ||| || ||||| |||||||| Sbjct 518135 ATCGTCTTGCCAGTAAGAGTCTTGACGAAGATTTGCAT 518172 >seq53 Length=642545 Score = 100 bits (110), Expect = 3e-16 Identities = 153/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || |||| ||| ||||| || || || ||||| || ||||||||||||| | |||| | Sbjct 401338 AGGCGCAGCACCAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGG 401279 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 || |||||||| || || || || |||| ||||| || || || || || || || Sbjct 401278 CCATCCTCGAGCTGCTTACCAGCGAAGATCAGGCGCTGTTGGTCCGGAGGAATACCCTCC 401219 Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675 || || || || || || || || | |||||||| || ||||| || || || Sbjct 401218 TTGTCCTGGATCTTGGCCTTCACATTCTCGATCGTGTCGGAAGACTCCACCTCAAGGGTG 401159 Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || ||||| | || || ||||| | |||||| Sbjct 401158 ATCGTCTTCCCGGTGAGGGTCTTGACGAACACTTGCAT 401121 >seq1 Length=1489072 Score = 100 bits (110), Expect = 3e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 134504 CACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTC 134563 ||| ||||| || ||| ||||| || ||||||||||||| | |||| | ||| || Sbjct 830630 CACCAGGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTGAGGGTGCGGCCGTCCTC 830689 Query 134564 GAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTG 134623 ||||| || || || ||||| | |||||| || || || || || || || || || || Sbjct 830690 CAGCTGCTTACCAGCGAAAATGAGACGCTGTTGGTCCGGAGGAATACCCTCCTTGTCCTG 830749 Query 134624 AATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTT 134683 || || || || ||| | ||||| || || || || ||||| || || || || Sbjct 830750 GATCTTGGCCTTCACATTGTCGATCGTGTCCGAGGACTCAACCTCGAGCGTGATCGTCTT 830809 Query 134684 ACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || | ||| || ||||| |||||||| Sbjct 830810 GCCAGTCAGAGTCTTGACGAAGATTTGCAT 830839 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505397825109320