Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20pachydermatis_20[genbank_20GCA_5F001278385.1_202015-09- 02] 91 sequences; 8,150,648 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq1 129 5e-25 seq53 111 1e-19 seq68 104 2e-17 >seq1 Length=1489072 Score = 129 bits (142), Expect = 5e-25 Identities = 145/194 (75%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 27057 TCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAA 27116 || || || || ||||||||||| | | |||| |||| || ||||| ||||| ||| || Sbjct 830649 TCCTTCTGGATGTTGTAGTCGCTGAGGGTGCGGCCGTCCTCCAGCTGCTTACCAGCGAAA 830708 Query 27117 ATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTT 27176 |||||||||||||| ||||| || | |||||| || || ||||||| |||| | Sbjct 830709 ATGAGACGCTGTTGGTCCGGAGGAATACCCTCCTTGTCCTGGATCTTGGCCTTCACATTG 830768 Query 27177 TCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACA 27236 || | ||||| | || ||||| || || || || | ||||| |||||||| || || Sbjct 830769 TCGATCGTGTCCGAGGACTCAACCTCGAGCGTGATCGTCTTGCCAGTCAGAGTCTTGACG 830828 Query 27237 AAGATTTGCATAGC 27250 ||||||||||| || Sbjct 830829 AAGATTTGCATGGC 830842 >seq53 Length=642545 Score = 111 bits (122), Expect = 1e-19 Identities = 166/236 (70%), Gaps = 0/236 (0%) Strand=Plus/Minus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || || |||| |||| |||| || | || || || || || || |||||||||||| Sbjct 401347 CCACCACGCAGGCGCAGCACCAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGCTC 401288 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | | |||| | || |||||||| ||||| ||| | || || |||||||| ||||| || Sbjct 401287 AGGGTGCGGCCATCCTCGAGCTGCTTACCAGCGAAGATCAGGCGCTGTTGGTCCGGAGGA 401228 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | |||||| || || ||||||| |||| | || | ||||| | | || || Sbjct 401227 ATACCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATCGTGTCGGAAGACTCCACC 401168 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATAGCTGCTAA 27256 || || || || | || || || || || || || || | ||||||||||||||| Sbjct 401167 TCAAGGGTGATCGTCTTCCCGGTGAGGGTCTTGACGAACACTTGCATAGCTGCTAA 401112 >seq68 Length=564861 Score = 104 bits (114), Expect = 2e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 27057 TCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAA 27116 || || || || ||||||||||||| |||| | || || ||||| ||||| ||| || Sbjct 517754 TCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCATCCTCCAGCTGCTTACCAGCGAAA 517813 Query 27117 ATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTT 27176 || ||||||||||| ||||| || | ||||| || || |||||| || | | | Sbjct 517814 ATAAGACGCTGTTGGTCCGGTGGAATGCCCTCCTTGTCCTGGATCTTAGCCTTGACGTTA 517873 Query 27177 TCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACA 27236 || | ||||| | || ||| ||||| | || |||| ||| || || ||||| || || Sbjct 517874 TCAATCGTGTCCGAGGATTCGACTTCCAATGTAATAGTTTTACCAGTAAGAGTCTTGACG 517933 Query 27237 AAGATTTGCATA 27248 || || |||||| Sbjct 517934 AAAATCTGCATA 517945 Score = 89.7 bits (98), Expect = 4e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 27057 TCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAA 27116 || || ||||| |||||||| |||| | || | || || | ||| ||||| ||| || Sbjct 517982 TCCTTCTGAATGTTGTAGTCACTCAAAGTACGGCCATCCTCCAACTGCTTACCAGCGAAA 518041 Query 27117 ATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTT 27176 || ||||||||||| || || || | ||| || || || |||||| |||| | Sbjct 518042 ATAAGACGCTGTTGGTCGGGAGGAATACCTTCCTTGTCCTGGATCTTAGCCTTCACATTG 518101 Query 27177 TCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACA 27236 || | ||||||| | || || || || || || | ||||| || ||||| || || Sbjct 518102 TCGATCGTGTCTGAAGACTCCACCTCCAGGGTGATCGTCTTGCCAGTAAGAGTCTTGACG 518161 Query 27237 AAGATTTGCATA 27248 |||||||||||| Sbjct 518162 AAGATTTGCATA 518173 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424933928721192