Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20pachydermatis_20[genbank_20GCA_5F001278385.1_202015-09- 02] 91 sequences; 8,150,648 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq11 120 4e-22 seq40 98.7 1e-15 >seq11 Length=163833 Score = 120 bits (132), Expect = 4e-22 Identities = 126/163 (77%), Gaps = 2/163 (1%) Strand=Plus/Minus Query 122659 GCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCT 122718 ||||| || ||| |||||||| || |||| |||||| || || ||||| | ||||| Sbjct 12576 GCAAAGTCGGTGTGCAGACCCTCGTCACGGGTAATAAGCTCGTTCGAGAACGACAGACCC 12517 Query 122719 GGCATGAGACCCCGCTTCTTCAACCAATAAATAG-CGCAGAATGACCCGGAGAAGAAGAT 122777 ||||||||||| |||||||||| ||| | || | |||| || || || ||||||||||| Sbjct 12516 GGCATGAGACCACGCTTCTTCAGCCAGAAGATCGACGCA-AACGAGCCCGAGAAGAAGAT 12458 Query 122778 ACCCTCCACACACGCAAACGCAAAAAGGCGTTCGGCGAAGGAG 122820 |||||||| |||||||| | |||||| || | ||| ||| Sbjct 12457 GCCCTCCACGGCGGCAAACGCCACAAGGCGCTCCGAGAACGAG 12415 >seq40 Length=1303022 Score = 98.7 bits (108), Expect = 1e-15 Identities = 300/458 (66%), Gaps = 8/458 (2%) Strand=Plus/Plus Query 181626 CCCGTACCGATACCCTCGGTTCCATTCACGAGAACCATTGGTAAAGTTGGCATGTAAAAG 181685 |||||||| |||||||| | |||||||| || || || | |||| ||| | Sbjct 156680 CCCGTACCAATACCCTCCGCTCCATTCAAAAGCACTTGCGGGACGACAGGCACGTACCAT 156739 Query 181686 TCTGGTTCAATGGAGCGTCCATCATCGTCCAAGTAGTTGAGGATCGGGTCATCCCGAGGA 181745 || || ||||| | ||||| |||||||||||||| || | || ||||| ||| Sbjct 156740 TCCGGCTCAATACTCTGGCCATCGTCGTCCAAGTAGTTCAGCAACGCATCATCTTTCGGA 156799 Query 181746 TCAAAGATCTTGCGAGCC-TCCTTGGTAAGTTTTGTGAAGATATACCTCGTTTGAGAAGC 181804 | || | |||||| | | | ||| | ||||| || || | || | || Sbjct 156800 TGGAAAAGCTTGCGTGTAATACGTGGCACCGCC-GTGAAAATGTAACGCGCACTGGCGGC 156858 Query 181805 GTCTTTACCACCCATGAGACGCGTACCAAATTGACCACATGGCTCAAGAAGGTTAATGTT 181864 || ||||| ||||| |||||||||||| |||||| ||| |||||||| | ||| Sbjct 156859 ATCCTTACCGCCCATACTACGCGTACCAAACTGACCATTCGGCGAGAGAAGGTTCACGTT 156918 Query 181865 GTTTGAACCTGTATAGTCGTTGGCCAACTTAACGATGGT-ATCCGCAAGGGACACT--TC 181921 ||| ||| |||||| | |||||| || || || || || ||| || || Sbjct 156919 GTTGCTACCACAATAGTCCTGCGCCAACCCGACAATCGTCATGACCA---GACTCTGGTC 156975 Query 181922 ACCGTGGTGGTAAGCTGACTTGTCCGCAACATATGCCGCCAACTGTGCCACCTTCATTTC 181981 || |||||||| || | | |||| || || | || ||| |||||| ||||| Sbjct 156976 GCCATGGTGGTACGCCGTGTGTTCCGAGACGTAACCTTGCAGCTGCTGCACCTTGATTTC 157035 Query 181982 ATCTTTGAGGTTCTTGTGGAAGCAAGCATACATCACTTTCCTCTGCGAAGGCTTGAGACC 182041 || | || | ||| || |||||| |||||| | ||| ||||||||||| Sbjct 157036 CGTCTTCAAATTGCGCTTGAAACATCCATACAGCACTTTGCGCTGACCCGGCTTGAGACC 157095 Query 182042 ATCCGCCATATGGGCAATAGAGCGCTTGAGGTCTGCCA 182079 |||| ||||| || ||| ||||| || ||| |||| Sbjct 157096 ATCCACCATACTGGGAATCGAGCGAATGTTGTCCGCCA 157133 Score = 93.3 bits (102), Expect = 5e-14 Identities = 222/333 (67%), Gaps = 2/333 (1%) Strand=Plus/Plus Query 182514 ATGAGACCCTTGATGTGAGAACCATCATTATCGGCATCTGTCATAATCATAAGACGACCA 182573 || || ||||||||||| || ||||| ||| || ||||||||||| | || ||| Sbjct 157565 ATAAGTCCCTTGATGTGCGAGCCATCGAAATCCTGGTCCGTCATAATCATCAAACTGCCA 157624 Query 182574 TAGCGAAGTTCAGAAACATCTTGGTAGTCTTTTCCTTGTTGAAGACCAAGGATCTTCTTG 182633 || || | || ||| || |||| || || || ||||| || |||| ||| Sbjct 157625 TATCGCAAACCATCCACAGACGAATACACTTTGCCATGCTGCAGACCGAGAATCTCTTTG 157684 Query 182634 AGATCATTGAACTCCTGGTTTGATGTAAGCTGTGCCACCGAAGCGTCCCGAACATTCTTA 182693 | | |||| |||| ||| ||| ||| | ||| || || || |||||| | Sbjct 157685 ATGTTCTTGATCTCCGTGTTCTTCATAATCTGATCATGCGAGGCTTCTCGCACATTCA-A 157743 Query 182694 CAT-TTACCGCGAAGTGGGAACACACCGTAGTGATCACGACCAACGACAGAGAGACCCGC 182752 || ||||| || |||||||||||||||||| ||||||||| || || | || | Sbjct 157744 CAGCTTACCACGCAGTGGGAACACACCGTAGGCATCACGACCGACCTCACTCAAGCCAGA 157803 Query 182753 AACCGCGAGGGTTTTCGCCGAATCACCCTCCGTGACAATGAGAGTACACTTTCCAGATTG 182812 || || || | || ||||| |||||||| || | ||| | || || | ||| | Sbjct 157804 GACAGCAAGCGCCTTAGCCGAGTCACCCTCTGTAAGAATCAACGTGCATTCGCCACTGCG 157863 Query 182813 TGCCGTACCCGCCTTGTTCGCGTCATCCAACTT 182845 | ||| || ||| |||||| || |||| ||| Sbjct 157864 TTTCGTGCCGGCCCAGTTCGCATCTTCCAGCTT 157896 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628031285613600