Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20pachydermatis_20[genbank_20GCA_5F001278385.1_202015-09- 02] 91 sequences; 8,150,648 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq40 111 2e-19 seq11 109 6e-19 >seq40 Length=1303022 Score = 111 bits (122), Expect = 2e-19 Identities = 283/428 (66%), Gaps = 6/428 (1%) Strand=Plus/Plus Query 168278 CCCGTACCGATACCCTCTGTACCGTTCACGAGAACCATGGGGAGTGTTGGCATGTAGAAG 168337 |||||||| |||||||| | || |||| || || |||| |||| ||| | Sbjct 156680 CCCGTACCAATACCCTCCGCTCCATTCAAAAGCACTTGCGGGACGACAGGCACGTACCAT 156739 Query 168338 TCTGGCTCAATGGGGCGACCATCGTCATCCAAATAGTTGAGAATTGGATCATCTCTCGGA 168397 || |||||||| | |||||||| ||||| ||||| || | | ||||||| ||||| Sbjct 156740 TCCGGCTCAATACTCTGGCCATCGTCGTCCAAGTAGTTCAGCAACGCATCATCTTTCGGA 156799 Query 168398 TCAAAGATCTTTCGGGCATCTTTTGTGAGCTTTGTAAAGATATACCTCGTTTGAGACGCA 168457 | || | ||| || | | || | | || || || || | || | ||| Sbjct 156800 TGGAAAAGCTTGCGTGTAATACGTGGCACCGCCGTGAAAATGTAACGCGCACTGGCGGCA 156859 Query 168458 TCCTTACCACCCATGAGACGCGTACCAAACTGACCACACGGCTCAAGAAGATTGATATTG 168517 |||||||| ||||| ||||||||||||||||||| |||| ||||| || | ||| Sbjct 156860 TCCTTACCGCCCATACTACGCGTACCAAACTGACCATTCGGCGAGAGAAGGTTCACGTTG 156919 Query 168518 TTTGAACCCATGTAGTCATTCGCCAACTTGACAATCGTGTCCGCGA-GAGAGACT--TCA 168574 || ||| ||||| | ||||||| ||||||||| | || ||| || || Sbjct 156920 TTGCTACCACAATAGTCCTGCGCCAACCCGACAATCGT---CATGACCAGACTCTGGTCG 156976 Query 168575 CCGTGGTGGTACGCACTCTTCTCTGCGACAAATGCCGCCAACTGCGCCACTTTCATCTCA 168634 || ||||||||||| | | || | ||| | | || |||| ||| || || || Sbjct 156977 CCATGGTGGTACGCCGTGTGTTCCGAGACGTAACCTTGCAGCTGCTGCACCTTGATTTCC 157036 Query 168635 TCCTTGAGATTCTTGTGGAAGCATGCGTACATAACCTTGCGTTGCGAAGGCTTGAGACCA 168694 ||| | ||| | ||| ||| | |||| || ||||| || |||||||||||| Sbjct 157037 GTCTTCAAATTGCGCTTGAAACATCCATACAGCACTTTGCGCTGACCCGGCTTGAGACCA 157096 Query 168695 TCCGCCAT 168702 ||| |||| Sbjct 157097 TCCACCAT 157104 Score = 89.7 bits (98), Expect = 6e-13 Identities = 223/336 (66%), Gaps = 2/336 (1%) Strand=Plus/Plus Query 169159 ATTGAGAATGAGACCCTTGATGTGGGAACCGTCGTTATCGGCATCCGTCATGATCATGAG 169218 ||||| ||| || ||||||||||| || || ||| ||| |||||||| ||||| | Sbjct 157558 ATTGATAATAAGTCCCTTGATGTGCGAGCCATCGAAATCCTGGTCCGTCATAATCATCAA 157617 Query 169219 ACGACCATACCGAAGCTCGGAAACATCTTGATAGTCCTTACCCTGTTGAAGACCCAAGAT 169278 || ||||| || | | ||| ||| | || || || || ||||| | || Sbjct 157618 ACTGCCATATCGCAAACCATCCACAGACGAATACACTTTGCCATGCTGCAGACCGAGAAT 157677 Query 169279 CTTCTTGAGATCGTTGAACTCTTGGTTTGATGTGAGCTGTGTGACAGAGGCATCGCGAAC 169338 || |||| | |||| ||| ||| | | ||| ||||| || || || Sbjct 157678 CTCTTTGATGTTCTTGATCTCCGTGTTCTTCATAATCTGATCATGCGAGGCTTCTCGCAC 157737 Query 169339 ATTCTTACA-CTTCCCACGAAGAGGGAAGACACCGTAGTGATCACGACCAACGACGGAGA 169397 |||| ||| ||| ||||| || ||||| ||||||||| ||||||||| || | | Sbjct 157738 ATTCA-ACAGCTTACCACGCAGTGGGAACACACCGTAGGCATCACGACCGACCTCACTCA 157796 Query 169398 GACCCGCGACTGCGAGAGTCTTCGCCGAGTCACCCTCGGTGACGATGAGCGTACATTTTC 169457 || | ||| || || | ||| |||||||||||||| || | || | ||| |||| | Sbjct 157797 AGCCAGAGACAGCAAGCGCCTTAGCCGAGTCACCCTCTGTAAGAATCAACGTGCATTCGC 157856 Query 169458 CAGATTGTGCCGTACCCGCCTTGTTCGCATCATCCA 169493 || || ||| || ||| ||||||||| |||| Sbjct 157857 CACTGCGTTTCGTGCCGGCCCAGTTCGCATCTTCCA 157892 >seq11 Length=163833 Score = 109 bits (120), Expect = 6e-19 Identities = 118/154 (77%), Gaps = 2/154 (1%) Strand=Plus/Plus Query 94804 GAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCG-C 94862 ||||| || | || ||||| || ||||| ||||||||||| || || || |||| | Sbjct 12425 GAGCGCCTTGTGGCGTTTGCCGCCGTGGAGGGCATCTTCTTCTCGGGCTCGTT-TGCGTC 12483 Query 94863 TATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTAT 94922 || | ||||| |||||||| ||||||||||| ||||| | ||||| ||||||||||| Sbjct 12484 GATCTTCTGGCTGAAGAAGCGTGGTCTCATGCCGGGTCTGTCGTTCTCGAACGAGCTTAT 12543 Query 94923 CTCTCGTGACGAGGGACTCCACCAAGAGTTTGCG 94956 | ||||||||||| || ||| || |||||| Sbjct 12544 TACCCGTGACGAGGGTCTGCACACCGACTTTGCG 12577 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583260136540840