Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Malassezia_20pachydermatis_20[genbank_20GCA_5F001278385.1_202015-09-
02] 91 sequences; 8,150,648 total letters
Query= NC_028108.1
Length=171454
Score E
Sequences producing significant alignments: (Bits) Value
seq11 134 2e-26
>seq11
Length=163833
Score = 134 bits (148), Expect = 2e-26
Identities = 380/571 (67%), Gaps = 22/571 (4%)
Strand=Plus/Plus
Query 59562 TTTCCTATACGGTACCCGGATCTGTGGGCCCTGTATAAGAAAGCGATCGGTTCATTCTGG 59621
|| || || || |||| || | ||||| |||| ||||| || | || ||||||
Sbjct 12002 TTCCCGATCCGCTACCACGAGATCTGGGCGATGTACAAGAAGGCTGAGGCCTCGTTCTGG 12061
Query 59622 TCCGTCGAGGAGATTGACCTCGCCGGAG-ACCTGAAGGATTGGGACAAGCTCAATTACGA 59680
||| |||||| | || || | || || || || | || |||||||| | || ||||
Sbjct 12062 ACCGCTGAGGAGGTCGATCT-GTCGAAGGACTTGCACGACTGGGACAACCGCATGAACGA 12120
Query 59681 C---GAGCAGCATTTCATCAAGATGGTCCTGGCCTTCTTCGCGGCGAGTGATGGAATTGT 59737
| |||| || || | | | ||||| || |||||||| ||| || || |||||
Sbjct 12121 CAACGAGCGTCACTTTGTGAGTACCGTCCTTGCGTTCTTCGCCGCGTCGGACGGTATTGT 12180
Query 59738 GATGGAAAA--TATAGACATGAACTTTTC--CAAGGATGTCCAGATTGCCGAGGCCCGGT 59793
|| || || | | | || | |||| ||| || || ||| | || ||||| || |
Sbjct 12181 GAACGAGAACCTGTTG----GAGCGTTTCAGCAACGAAGTGCAGGTGGCGGAGGCTCGCT 12236
Query 59794 CGTTCTACGCGTATCAGTCGTTCAACGAGTCTATCCACTCCGAGACGTACTCGCTCATGA 59853
||||||| | ||| | | ||| || ||||| ||||| |||||||| | |
Sbjct 12237 GCTTCTACGGTTTCCAGATTATGATGGAGAACATTCACTCGGAGACCTACTCGCTGCTCA 12296
Query 59854 TCGATAAGTTGGTCAAGGATCCGGAAGAGAAGGCTGGT--CTGTTCCGTGCCATAGAGAC 59911
|||| | || || || ||| || || || |||||| || || |||||
Sbjct 12297 TCGACACGTACATCCGCGACACGGCGCAGC--GCGAGTACCTGTTCAACGCTATCGAGAC 12354
Query 59912 GTCCCCCGCAGTTAAACAAAAAGCAGAATGGGCCATGCAGTGGATGA--GTCCTG-GAGC 59968
|||| || || || || || || |||||| | | ||||| | | | | ||
Sbjct 12355 CATTCCCGTTGTGAAGCAGAAGGCCGAGTGGGCCCTTCGCTGGATTGCGGACAAGCGTGC 12414
Query 59969 ATCATTTGCACAACGTCTCATAGCTTTTGCATGCGTGGAAGGAATCTTCTTCTCTGGCTC 60028
|| || | | || || | || ||||| |||||| || ||||||||||| |||||
Sbjct 12415 CTCGTTCTCGGAGCGCCTTGTGGCGTTTGCCGCCGTGGAGGGCATCTTCTTCTCGGGCTC 12474
Query 60029 GTTCTGTG-CTATTTTCTGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTCTCCA 60087
||| || | | || |||||||| || |||||||| ||||||||||| ||| ||||| |
Sbjct 12475 GTT-TGCGTCGATCTTCTGGCTGAAGAAGCGTGGTCTCATGCCGGGTCTGTCGTTCTCGA 12533
Query 60088 ACGAGCTGATTTCCCGGGACGAGGGCCTCCA 60118
||||||| ||| |||| |||||||| || ||
Sbjct 12534 ACGAGCTTATTACCCGTGACGAGGGTCTGCA 12564
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 548524176053040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |