Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20pachydermatis_20[genbank_20GCA_5F001278385.1_202015-09- 02] 91 sequences; 8,150,648 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq40 165 9e-36 seq11 129 6e-25 >seq40 Length=1303022 Score = 165 bits (182), Expect = 9e-36 Identities = 316/457 (69%), Gaps = 14/457 (3%) Strand=Plus/Plus Query 117152 CCAGTTCCGATACCCTCTGCACCATTCATCAGAATCATCGGCACGACAGGAACGTAGAAC 117211 || || || |||||||| || ||||||| || | ||| |||||||| ||||| | Sbjct 156680 CCCGTACCAATACCCTCCGCTCCATTCAAAAGCACTTGCGGGACGACAGGCACGTACCAT 156739 Query 117212 TCAGGCTCCAC---CTGCAGACCGTCGTCCGTGACGTACTTGAGCACCGCATTGTCACTC 117268 || ||||| | ||| | |||||||| | ||| || |||| ||||| || || Sbjct 156740 TCCGGCTCAATACTCTGGCCATCGTCGTCC---AAGTAGTTCAGCAACGCATCATCTTTC 156796 Query 117269 GGATCGAATATGTT-CTTGGTCCACGGTGCTAGGCGAGTGAAAATGTAACGAGAGCTTGC 117327 |||| ||| | || | || ||| || || |||||||||||||| | || || Sbjct 156797 GGATGGAAAAGCTTGCGTGTAATACGTGGCACCGCC-GTGAAAATGTAACGCGCACTGGC 156855 Query 117328 AGCATCCTTGCCACCAGCAAGACGCGTACCGAATTGTCCACTCGGCTCCAAGAGGTTCAG 117387 |||||||| || || | ||||||||| || || ||| ||||| | ||||||| Sbjct 156856 GGCATCCTTACCGCCCATACTACGCGTACCAAACTGACCATTCGGCGAGAGAAGGTTCAC 156915 Query 117388 GTTGTTGGCGCCCACAA-AGTTTTGAGCCAAGTTGACAATCGTACCTTG--GAGGCTCGC 117444 |||||| || |||||| ||| || ||||| ||||||||| | || || ||| Sbjct 156916 GTTGTT-GCTACCACAATAGTCCTGCGCCAACCCGACAATCGT--CATGACCAGACTCTG 156972 Query 117445 CTCACCATGGTGATACGCCGTCTGCTCCGCCACGTAGCCCGCCAGCTGAGCCACCTTCAT 117504 || |||||||| |||||||| || |||| ||||| || |||||| |||||| || Sbjct 156973 GTCGCCATGGTGGTACGCCGTGTGTTCCGAGACGTAACCTTGCAGCTGCTGCACCTTGAT 157032 Query 117505 GTCTGACGTCAGGTTCTTCTTGAGGCAGGCATAAATCACCTTGCGCTGACTTGGCTTCAG 117564 || | | ||| || ||||| || |||| | ||| |||||||||| ||||| || Sbjct 157033 TTCCGTCTTCAAATTGCGCTTGAAACATCCATACAGCACTTTGCGCTGACCCGGCTTGAG 157092 Query 117565 ACCATCCGCCACGTGAGGGATCGAACGCTTGATGTCC 117601 ||||||| ||| || ||||| || || ||||| Sbjct 157093 ACCATCCACCATACTGGGAATCGAGCGAATGTTGTCC 157129 Score = 140 bits (154), Expect = 4e-28 Identities = 231/331 (70%), Gaps = 2/331 (1%) Strand=Plus/Plus Query 118013 AGCCCCTTGATATGGGAACCGTCCAGATCCGCATCGGTCATGATCATCAGGCGGCCGTAC 118072 || |||||||| || || || || | |||| || ||||| ||||||| | ||| || Sbjct 157568 AGTCCCTTGATGTGCGAGCCATCGAAATCCTGGTCCGTCATAATCATCAAACTGCCATAT 157627 Query 118073 CGTAAATCTCTCAGGGAGTTATAAACCTTACCATGTTGGAGCCCGAGGATCTTTTTAAGG 118132 || ||| | || || ||| || || ||||| || || ||||| |||| ||| | | Sbjct 157628 CGCAAACCATCCACAGACGAATACACTTTGCCATGCTGCAGACCGAGAATCTCTTTGATG 157687 Query 118133 TTGGAAAATTCCTCATTTTCCGTCACCTGTTTTATG-GTGGCGTCCCGAACGTTGCGCGG 118191 || | ||| || | | | | ||| | ||| | ||| || || || || | | Sbjct 157688 TTCTTGATCTCCGTGTTCTTCATAATCTGATC-ATGCGAGGCTTCTCGCACATTCAACAG 157746 Query 118192 CTTACCCCGCAGTGGAAACACGCCAAACTTGTCACGGCCCACAACGCTCAAGCCGGCAAT 118251 |||||| |||||||| ||||| || | ||||| || || | |||||||| | | Sbjct 157747 CTTACCACGCAGTGGGAACACACCGTAGGCATCACGACCGACCTCACTCAAGCCAGAGAC 157806 Query 118252 AGCAAGGGCCTTCGCCGAGTCACCCTCGGTAATAATAAGAGTGCACTCGGTGCTGCGATG 118311 |||||| ||||| |||||||||||||| |||| ||| | ||||| ||| ||||| | Sbjct 157807 AGCAAGCGCCTTAGCCGAGTCACCCTCTGTAAGAATCAACGTGCATTCGCCACTGCGTTT 157866 Query 118312 AGTACCGGCCCAATTAGCATCATCCAGCTTC 118342 || |||||||| || ||||| ||||||||| Sbjct 157867 CGTGCCGGCCCAGTTCGCATCTTCCAGCTTC 157897 >seq11 Length=163833 Score = 129 bits (142), Expect = 6e-25 Identities = 528/812 (65%), Gaps = 48/812 (6%) Strand=Plus/Minus Query 74481 TCAAAAAAGTTGGTCTTCCCTTCCAACGAGATGTTCTCCATCCAGTCGAAAGGGTTCTTT 74540 || |||||||| | ||| || | || ||||||||||||||| |||| || || ||| | Sbjct 12846 TCGAAAAAGTTCGACTTGCCCTGCAGCGAGATGTTCTCCATAAAGTCAAATGGATTCGTC 12787 Query 74541 GCACCGTAAATAGGCTTC----TCCCCAAACTGTGCCATGAGGCGATCCGCCACAAATTG 74596 | ||| ||||| | || | | | ||| || || || |||||||| | Sbjct 12786 GAGTGGTAGT---GCTTCGGGTTGCCGAGAGCGA-CCAGCAGACGGTCGGCCACAAACTC 12731 Query 74597 AATGTACTGCGTCATTTCTCCCGCATCCATGCCGATGAGTTTGCAC-GGCAGTGCCTCGG 74655 ||||||||| ||| | |||| ||||||||| || ||| ||||| ||||| | Sbjct 12730 AATGTACTGGCACATGAGACGAGCATTCATGCCGATAAGCGA-CACAGGCAGAGCCTCCG 12672 Query 74656 TGATAAACTCACTCTCCACCTCGCAAGCCCATTGGACAATCTTGTGAATGTCTTTGGAAG 74715 | | ||| || |||| | | | |||| | | ||| || | || | || || Sbjct 12671 TCAAAAAGTCCTTCTCGATCGAGACAGCC---TCGGTAATGATGCGGTTGACCGTGTCAG 12615 Query 74716 GG------CACTTTTCCCTCAGGTGAGAGTAAAGCGT-CACGGCAAACTCCTGATGCGAG 74768 || | ||| | |||||||| | | ||| |||| |||| || ||| Sbjct 12614 GGTGCGAGCGCTTCT---TCAGGTGACTGAACAGCAAGCACG-CAAAGTCGGTGTGCAGA 12559 Query 74769 CCTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCCAGGCATAAGTCCACGCTTC 74828 || || || | | | || | || ||||| ||||| || || ||||| || ||||||||| Sbjct 12558 CCCTCGTCACGGGTAATAAGCTCGTTCGAGAACGACAGACCCGGCATGAGACCACGCTTC 12499 Query 74829 TTCAACCAAAAGATGG-CACAGAAGGAACCACTGAAGAAGATGCCTTCGACACACGCAAA 74887 |||| ||| ||||| | | || || || || |||||||||||| || || ||||| Sbjct 12498 TTCAGCCAGAAGATCGACGCA-AACGAGCCCGAGAAGAAGATGCCCTCCACGGCGGCAAA 12440 Query 74888 GGCGACAAGGCGTTGCGCGAACGGTGCATCGGAAGTC----ATCCAAGTCTGAGCCCATT 74943 || |||||||| | || ||||| ||| || ||| ||||| | ||||| | Sbjct 12439 CGCCACAAGGCGCTCCGAGAACGAGGCA-CGCTTGTCCGCAATCCAGCGAAGGGCCCACT 12381 Query 74944 CAGCTTTTCGTTTGACCGCAGGGACAGTATCGATCGCTTGGAAGAGG--CTTGC-CTTCT 75000 | || || | || || | || | || ||||| || | ||| ||| || || || | Sbjct 12380 CGGCCTTCTGCTTCACAACGGGAATGGTCTCGATAGCGTTGAACAGGTACTCGCGCTGCG 12321 Query 75001 CTTCGGGATCCTTGACGAGCTTGTCAATCATAAGTGAGTACGTCTCCGAATGAATCGACT 75060 | || | || || | | |||| || | || ||||| |||||||| ||||| || Sbjct 12320 C--CGTG-TCGCGGATGTACGTGTCGATGAGCAGCGAGTAGGTCTCCGAGTGAATGTTCT 12264 Query 75061 CGTTGAACGACTGGTACGCGTAGAAAGACCGCGCCTCTGCAATCTGTACATCCTT--TGA 75118 | | | |||| | ||||||| | || ||||| || | ||| || || || ||| Sbjct 12263 CCATCATAATCTGGAAACCGTAGAAGCAGCGAGCCTCCGCCACCTGCACTTCGTTGCTGA 12204 Query 75119 AAAATTCATGTCGATA--TTCTCCATGACGATGCCGTCCGAGGCGGCGAAAAAAGCCAGT 75176 || || | | | ||||| | || || |||||||| |||||||| || || || Sbjct 12203 AACGCTC----CAACAGGTTCTCGTTCACAATACCGTCCGACGCGGCGAAGAACGCAAGG 12148 Query 75177 ACCATTTTGATAAAGTGGCGCTC---ATCGTCAGTGAGTTTGTCCCAATCCTTCAGGTCC 75233 || | | | |||||| ||||| |||| || | |||||||| || | || |||| Sbjct 12147 ACGGTACTCACAAAGTGACGCTCGTTGTCGTTCATGCGGTTGTCCCAGTCGTGCAAGTCC 12088 Query 75234 CCCGCCAAATCAATCTCCTCGACCGTCCAGAA 75265 || || ||| | |||||| | |||||||| Sbjct 12087 TTCGACAGATCGACCTCCTCAGCGGTCCAGAA 12056 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547215377541800