Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20pachydermatis_20[genbank_20GCA_5F001278385.1_202015-09- 02] 91 sequences; 8,150,648 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq53 179 4e-40 seq1 174 2e-38 seq68 167 3e-36 seq40 156 5e-33 seq11 123 3e-23 >seq53 Length=642545 Score = 179 bits (198), Expect = 4e-40 Identities = 178/228 (78%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||| | || |||||||| || ||||| ||||| || || |||||||| ||||| Sbjct 401121 ATGCAAGTGTTCGTCAAGACCCTCACCGGGAAGACGATCACCCTTGAGGTGGAGTCTTCC 401180 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | ||| ||||||| || || |||||||||||||| |||||||| ||||| Sbjct 401181 GACACGATCGAGAATGTGAAGGCCAAGATCCAGGACAAGGAGGGTATTCCTCCGGACCAA 401240 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAA 27584 ||||| || || || ||||||||||| |||||||||| || ||||| ||| ||||| || Sbjct 401241 CAGCGCCTGATCTTCGCTGGTAAGCAGCTCGAGGATGGCCGCACCCTGAGC-GACTACAA 401299 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| || |||||||| || || |||| || || ||||| Sbjct 401300 CATCCAGAAGGAGTCGACTCTTCACCTGGTGCTGCGCCTGCGTGGTGG 401347 Score = 116 bits (128), Expect = 4e-21 Identities = 115/149 (77%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 27484 AAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCT 27543 || || || ||||| |||||||||||||||||||| || || |||||||| || ||||| Sbjct 499082 AAAGCAAAGATTCAAGACAAGGAGGGAATTCCTCCGGATCAACAGCGTCTGATCTTTGCC 499023 Query 27544 GGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACT 27603 || ||||| || ||||| | ||||| || |||||||| ||||||| ||| ||| Sbjct 499022 GGAAAGCAGCTAGAGGACGGGCGTACACTCAGTGACTATAACATCCAAAAAGAAAGCACC 498963 Query 27604 CTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 || || || || |||| ||||| ||||| Sbjct 498962 CTGCACCTGGTACTGCGCCTTCGTGGTGG 498934 >seq1 Length=1489072 Score = 174 bits (192), Expect = 2e-38 Identities = 166/210 (79%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||||||||| |||||||| || || |||||||| || || || ||||||||||| Sbjct 830839 ATGCAAATCTTCGTCAAGACTCTGACTGGCAAGACGATCACGCTCGAGGTTGAGTCCTCG 830780 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | ||| ||||||| || || |||||||||||||| |||||||| ||||| Sbjct 830779 GACACGATCGACAATGTGAAGGCCAAGATCCAGGACAAGGAGGGTATTCCTCCGGACCAA 830720 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAA 27584 |||||||| ||||| ||||||||||| || ||||| | || ||||| ||| ||||| || Sbjct 830719 CAGCGTCTCATTTTCGCTGGTAAGCAGCTGGAGGACGGCCGCACCCTCAGC-GACTACAA 830661 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGT 27614 |||| ||||| ||||||||| || || Sbjct 830660 CATCCAGAAGGAGAGCACTCTTCACCTGGT 830631 >seq68 Length=564861 Score = 167 bits (184), Expect = 3e-36 Identities = 173/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||||||||| |||||||| ||||| |||||||| || || || ||||| ||||| Sbjct 518172 ATGCAAATCTTCGTCAAGACTCTTACTGGCAAGACGATCACCCTGGAGGTGGAGTCTTCA 518113 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | ||| |||||||||| || ||||||||||| || |||||||| ||||| Sbjct 518112 GACACGATCGACAATGTGAAGGCTAAGATCCAGGACAAGGAAGGTATTCCTCCCGACCAA 518053 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| ||||| ||||||||||| | ||||||| ||||| | ||||| || Sbjct 518052 CAGCGTCTTATTTTCGCTGGTAAGCAGTTGGAGGATGGCCGTACTTTGAGTGACTACAAC 517993 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | || ||||| ||||||||| | || | || ||||| ||||| Sbjct 517992 ATTCAGAAGGAGAGCACTCTTCACTTGGTGCTTCGCCTTCGTGGTGG 517946 Score = 161 bits (178), Expect = 1e-34 Identities = 176/231 (76%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 27403 ATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCA 27462 || |||||||| || || |||||||| || |||||||| || || || ||||| ||||| Sbjct 518403 ATCATGCAAATTTTCGTTAAGACGCTCACTGGCAAGACGATCACCCTGGAGGTGGAGTCT 518344 Query 27463 GGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGAC 27522 || | || | ||| |||||||||| || ||||||||||| || |||||||| ||| Sbjct 518343 TCAGACACGATCGACAATGTGAAGGCTAAGATCCAGGACAAGGAAGGTATTCCTCCGGAC 518284 Query 27523 CAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTA 27581 || || || | || |||||||||||||| | ||||||| || || || ||| ||||| Sbjct 518283 CAACAACGCTTGATCTTTGCTGGTAAGCAGTTGGAGGATGGGCGCACTCTGAGC-GACTA 518225 Query 27582 TAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 || |||| ||||| ||||||||| || || | ||||| |||||||| Sbjct 518224 CAACATCCAGAAGGAGAGCACTCTTCACCTGGTTCTCCGTCTGCGCGGTGG 518174 Score = 149 bits (164), Expect = 7e-31 Identities = 173/231 (75%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || || |||||||| ||||| || || |||||||| | || || || || Sbjct 517944 ATGCAGATTTTCGTCAAGACTCTTACTGGTAAAACTATTACATTGGAAGTCGAATCCTCG 517885 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| || | |||||||| || |||||||||||||| ||||| || ||||| Sbjct 517884 GACACGATTGATAACGTCAAGGCTAAGATCCAGGACAAGGAGGGCATTCCACCGGACCAA 517825 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAA 27584 |||||||| ||||| ||||||||||| || ||||||| || || || ||| ||||| || Sbjct 517824 CAGCGTCTTATTTTCGCTGGTAAGCAGCTGGAGGATGGCCGCACTCTGAGC-GACTACAA 517766 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACA 27635 |||| ||||| ||| || || || || | ||||| || ||||| || Sbjct 517765 CATCCAGAAGGAGAGCACGCTGCACCTTGTTCTCCGTCTGCGTGGTGGCCA 517715 >seq40 Length=1303022 Score = 156 bits (172), Expect = 5e-33 Identities = 236/335 (70%), Gaps = 8/335 (2%) Strand=Plus/Minus Query 31209 GAAGCTCGACGACGCCAACTGGGCCGGTACCCACAAGTCGCA----CGAGTGCACGCTTA 31264 |||||| || || || ||||||||||| ||| | |||| ||| |||||| | | Sbjct 157897 GAAGCTGGAAGATGCGAACTGGGCCGG----CACGAAACGCAGTGGCGAATGCACGTTGA 157842 Query 31265 TTATTACCGAGGGTGACTCGGCAAAGGCGCTTGCTATTGCTGGCTTGAGTGTTGTGGGGC 31324 || |||| |||||||||||||| |||||||||||| | |||||||||||| || || | Sbjct 157841 TTCTTACAGAGGGTGACTCGGCTAAGGCGCTTGCTGTCTCTGGCTTGAGTGAGGTCGGTC 157782 Query 31325 GCAATGCGTTCGGGGTGTTTCCGCTCCGAGGCAAGCCGCGTAACGTTCGTGACGCCTCCG 31384 | |||| | ||| ||||| || || || || |||| | || || || || ||||| Sbjct 157781 GTGATGCCTACGGTGTGTTCCCACTGCGTGGTAAGCTGTTGAATGTGCGAGAAGCCTCGC 157722 Query 31385 TTAAACAGGTTACGGATAATGAAGAGTTTTCCAACCTGAAAAAGATCCTCGGGCTTCAGC 31444 | | ||| ||| | | || ||| | ||| | ||| |||| ||||| || |||| Sbjct 157721 ATGATCAGATTATGAAGAACACGGAGATCAAGAACATCAAAGAGATTCTCGGTCTGCAGC 157662 Query 31445 ATGGCAAGGTATATAATTCACTGAGAGAATTGCGGTACGGTCGCCTCATGATTATGACCG 31504 ||||||| || ||| || || | ||||| || || | | ||||||||||| | Sbjct 157661 ATGGCAAAGTGTATTCGTCTGTGGATGGTTTGCGATATGGCAGTTTGATGATTATGACGG 157602 Query 31505 ACGCAGATCTCGACGGCAGTCACATCAAGGGTCTT 31539 || ||| |||| ||| ||||||||||| ||| Sbjct 157601 ACCAGGATTTCGATGGCTCGCACATCAAGGGACTT 157567 >seq11 Length=163833 Score = 123 bits (136), Expect = 3e-23 Identities = 549/859 (64%), Gaps = 34/859 (4%) Strand=Plus/Plus Query 64297 TTCCCAATTAGGTACCCTGATTTGTGGGAGCTTTACAAGAAAGCCATCGCAAGTTTCTGG 64356 ||||| || | |||| || | |||| | | |||||||| || || |||||| Sbjct 12002 TTCCCGATCCGCTACCACGAGATCTGGGCGATGTACAAGAAGGCTGAGGCCTCGTTCTGG 12061 Query 64357 ACGGTCGAGGAGGTTGATCTCGCCAAGGATCTCAGCGACTGGGAAAACC---TAAACTCA 64413 || | |||||||| ||||| | ||||| | ||||||||| |||| | ||| Sbjct 12062 ACCGCTGAGGAGGTCGATCTGTCGAAGGACTTGCACGACTGGGACAACCGCATGAACGAC 12121 Query 64414 CAGGAACAGCACTTCATCAAGTTGGTCCTAGCATTCTTCGCATCAAGTGACGGAATTGTG 64473 | || | ||||| | | ||||| || |||||||| | ||||| |||||| Sbjct 12122 AACGAGCGTCACTTTGTGAGTACCGTCCTTGCGTTCTTCGCCGCGTCGGACGGTATTGTG 12181 Query 64474 TTTGAGAAT---TTGGACCTAAATTTTACAAAGGATGTTCAGATCCCAGAGGCGCGGTCA 64530 ||||| ||||| | ||| | || || || ||| | | ||||| || | Sbjct 12182 AACGAGAACCTGTTGGAGCG---TTTCAGCAACGAAGTGCAGGTGGCGGAGGCTCGCTGC 12238 Query 64531 TTCTATGCGTATCAGGGATTTAACGAAAGTATTCATGGCGAGACGTATTCGCTCATGATT 64590 ||||| | | ||| | | || | ||||| ||||| || ||||| | || Sbjct 12239 TTCTACGGTTTCCAGATTATGATGGAGAACATTCACTCGGAGACCTACTCGCTGCTCATC 12298 Query 64591 GACAAGTTTGTTCGGGATCCTGTCGAGAAGGATGGACTGTTCAGGGCTATAGAGACTGTA 64650 |||| || | || || | | || || ||||||| ||||| ||||| | Sbjct 12299 GACACGTACATCCGCGACACGGCGCAGCGCGAGTACCTGTTCAACGCTATCGAGACCATT 12358 Query 64651 CCCGCTGTTACTAAAAAGGCTGAATGGGCCATCCGGTGGATG------AATCGTGGGTCG 64704 |||| ||| | | ||||| || |||||| | || ||||| || |||| ||| Sbjct 12359 CCCGTTGTGAAGCAGAAGGCCGAGTGGGCCCTTCGCTGGATTGCGGACAAGCGTGCCTCG 12418 Query 64705 TCGTTTGGTCAGCGTCTCGCAGCTTTTGCCTGTGTGGAAGGAATTTTCTTTTCTGGGTCA 64764 | | | |||| || | || |||||| ||||| || || ||||| || || || Sbjct 12419 TTCTCGG---AGCGCCTTGTGGCGTTTGCCGCCGTGGAGGGCATCTTCTTCTCGGGCTCG 12475 Query 64765 TTCTGTTCTATTTTCTGGCTAAAAAAGCGGGGCCTGATGCCAGGTCTGTCGTTTTCGAAC 64824 || || || |||||||| || ||||| || || ||||| ||||||||||| |||||| Sbjct 12476 TTTGCGTCGATCTTCTGGCTGAAGAAGCGTGGTCTCATGCCGGGTCTGTCGTTCTCGAAC 12535 Query 64825 GAGCTGATCTCTCGGGACGAGGGGCTCCACCAAGAATTTGCGGTTACCCTGTTCAGCCAC 64884 ||||| || | || |||||||| || ||| || |||||| |||||||| ||| Sbjct 12536 GAGCTTATTACCCGTGACGAGGGTCTGCACACCGACTTTGCGTGCTTGCTGTTCAGTCAC 12595 Query 64885 CTCAAGGACAAACCATCACA---TGGGACTATAATTGATATAGTAAAATCGGCTGTAGAA 64941 || ||| || | || || || || | | || | | |||||| Sbjct 12596 CTGAAG---AAGCGCTCGCACCCTGACACGGTCAACCGCATCATTACCGAGGCTGTCTCG 12652 Query 64942 ATTGAAAAGGAATTCATTACTGCCGCGCTTCC-GTGTCGTCTCATCGGCATGGATGCCGA 65000 || || ||||| || | || | || || || |||||| || ||||||||| |||| Sbjct 12653 ATCGAGAAGGACTTTTTGACGGAGGCTCTGCCTGTGTCG-CTTATCGGCATGAATGCTCG 12711 Query 65001 TAAGATGAAACAGTATATCGAATTTGTAGCAGATCGCCTGCTTACTCAGT-TTGGTA--- 65056 | ||| ||||| || || ||||| || || || |||| | || | | || | Sbjct 12712 TCTCATGTGCCAGTACATTGAGTTTGTGGCCGACCGTCTGC-TGGTCGCTCTCGGCAACC 12770 Query 65057 TTAAGCCCTACTGGAATTCTTCAAATCCATTTGACTGGATGGAGACGATCAGCCTGGAGG 65116 |||| |||| | || | ||||||||||||| ||||||| ||| ||| ||| Sbjct 12771 CGAAGCACTAC---CACTCGACGAATCCATTTGACTTTATGGAGAACATCTCGCTGCAGG 12827 Query 65117 GGAAGACTAACTTTTTTGA 65135 | ||| | |||||||| || Sbjct 12828 GCAAGTCGAACTTTTTCGA 12846 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570309751271920