Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Malassezia_20pachydermatis_20[genbank_20GCA_5F001278385.1_202015-09-
02] 91 sequences; 8,150,648 total letters
Query= NC_028491.1
Length=98392
Score E
Sequences producing significant alignments: (Bits) Value
seq53 105 4e-18
seq68 100 2e-16
seq1 87.8 1e-12
>seq53
Length=642545
Score = 105 bits (116), Expect = 4e-18
Identities = 120/160 (75%), Gaps = 1/160 (1%)
Strand=Plus/Plus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| || | ||| |||| |||| || || ||||| || ||||| |||||||| ||
Sbjct 498934 CCACCACGAAGGCGCAGTACCAGGTGCAGGGTGCTTTCTTTTTGGATGTTATAGTCACTG 498993
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
||||| ||| |||| || || || || |||||||| || | ||||||||| ||||| ||
Sbjct 498994 AGTGTACGCCCGTCCTCTAGCTGCTTTCCGGCAAAGATCAGACGCTGTTGATCCGGAGGA 499053
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAAAA 34639
| ||||||||||||| ||| |||| ||| || ||| ||
Sbjct 499054 ATTCCCTCCTTGTCT-TGAATCTTTGCTTTGACTATACAA 499092
>seq68
Length=564861
Score = 100 bits (110), Expect = 2e-16
Identities = 146/204 (72%), Gaps = 2/204 (1%)
Strand=Plus/Plus
Query 34504 TGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGT 34563
|| || ||||||||||| || ||||| || || || || || | || || || ||
Sbjct 517742 TGCAGCGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCATCCTCCAGCTGC 517801
Query 34564 TTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTT 34623
||||| || || || | ||||||||||||||| || | ||||||||||| |||| ||
Sbjct 517802 TTACCAGCGAAAATAAGACGCTGTTGGTCCGGTGGAATGCCCTCCTTGTCCTGGATC-TT 517860
Query 34624 TGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGT 34682
| || ||| || ||| ||||| | || ||||||| || || |||||||| ||
Sbjct 517861 AGCCTTGACGTTATCAATCGTGTCCGAGGATTCGACTTCCAATGTAATAGTTTTACCAGT 517920
Query 34683 TAACGTTTTCACAAAAATCTGCAT 34706
| || || || |||||||||||
Sbjct 517921 AAGAGTCTTGACGAAAATCTGCAT 517944
Score = 98.7 bits (108), Expect = 6e-16
Identities = 157/223 (70%), Gaps = 2/223 (1%)
Strand=Plus/Plus
Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548
||||| | |||| || |||||||||||||| || ||||| || || || || |||
Sbjct 518183 AGACGGAGAACCAGGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGC 518242
Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608
| || || | || ||||| ||||| || || || ||||||||||| || | || |||
Sbjct 518243 CCATCCTCCAACTGCTTACCAGCAAAGATCAAGCGTTGTTGGTCCGGAGGAATACCTTCC 518302
Query 34609 TTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667
||||| |||| || | || || | || |||||| |||||| |||| |||
Sbjct 518303 TTGTCCTGGATC-TTAGCCTTCACATTGTCGATCGTGTCTGAAGACTCCACCTCCAGGGT 518361
Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTTG 34710
||||| || || || | ||| || || ||||| |||||| ||
Sbjct 518362 GATCGTCTTGCCAGTGAGCGTCTTAACGAAAATTTGCATGATG 518404
Score = 87.8 bits (96), Expect = 1e-12
Identities = 160/230 (70%), Gaps = 6/230 (3%)
Strand=Plus/Plus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAAT--CTG 34537
|| || | ||| || | |||||| || |||||||||||||| |||||||| || | ||
Sbjct 517946 CCACCACGAAGGCGAAGCACCAAGTGAAGAGTGCTCTCCTTCTGAATGTTGTAGTCACTC 518005
Query 34538 AAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCG 34597
||| || || | || || | || ||||| || || || | |||||||||||| || |
Sbjct 518006 AAA--GTACGGCCATCCTCCAACTGCTTACCAGCGAAAATAAGACGCTGTTGGTCGGGAG 518063
Query 34598 GCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCC 34656
| | || |||||||| |||| || | || || | || |||||| ||||
Sbjct 518064 GAATACCTTCCTTGTCCTGGATC-TTAGCCTTCACATTGTCGATCGTGTCTGAAGACTCC 518122
Query 34657 ACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|| |||| ||| ||||| || || || | || || || || || |||||
Sbjct 518123 ACCTCCAGGGTGATCGTCTTGCCAGTAAGAGTCTTGACGAAGATTTGCAT 518172
>seq1
Length=1489072
Score = 87.8 bits (96), Expect = 1e-12
Identities = 95/126 (75%), Gaps = 0/126 (0%)
Strand=Plus/Plus
Query 34497 CACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTC 34556
||||| || |||||||||||||| || ||||| || || || || || |||| ||
Sbjct 830630 CACCAGGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTGAGGGTGCGGCCGTCCTC 830689
Query 34557 AAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGT 34616
|| || ||||| || || || | ||||||||||||||| || | |||||||||||
Sbjct 830690 CAGCTGCTTACCAGCGAAAATGAGACGCTGTTGGTCCGGAGGAATACCCTCCTTGTCCTG 830749
Query 34617 GATCTT 34622
||||||
Sbjct 830750 GATCTT 830755
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 314729250945203
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |