Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20pachydermatis_20[genbank_20GCA_5F001278385.1_202015-09- 02] 91 sequences; 8,150,648 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq53 91.5 1e-13 seq68 86.0 5e-12 >seq53 Length=642545 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26985 GCCATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCG 27044 || ||||| | || || || || || ||||| ||| | || || ||||| ||||| | Sbjct 401118 GCTATGCAAGTGTTCGTCAAGACCCTCACCGGGAAGACGATCACCCTTGAGGTGGAGTCT 401177 Query 27045 TCCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGAT 27104 |||||| |||| |||| || || || || || ||||| || || || || || || Sbjct 401178 TCCGACACGATCGAGAATGTGAAGGCCAAGATCCAGGACAAGGAGGGTATTCCTCCGGAC 401237 Query 27105 CAACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTAC 27164 |||||||| | || | ||| || || || | || || | ||| | ||| ||| Sbjct 401238 CAACAGCGCCTGATCTTCGCTGGTAAGCAGCTCGAGGATGGCCGCACCCTGAGCGACTAC 401297 Query 27165 AACATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 ||||| || ||||||||||| | || |||| |||| |||| ||||| Sbjct 401298 AACATCCAGAAGGAGTCGACTCTTCACCTGGTGCTGCGCCTGCGTGGTGG 401347 >seq68 Length=564861 Score = 86.0 bits (94), Expect = 5e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || || ||||| || |||||| | || || || || ||||| | || Sbjct 518172 ATGCAAATCTTCGTCAAGACTCTTACTGGCAAGACGATCACCCTGGAGGTGGAGTCTTCA 518113 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| |||| || | || || || || || ||||| ||||| || || ||||| ||| Sbjct 518112 GACACGATCGACAATGTGAAGGCTAAGATCCAGGACAAGGAAGGTATTCCTCCCGACCAA 518053 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||| | || | ||| || || || ||||| || | || | || |||||| Sbjct 518052 CAGCGTCTTATTTTCGCTGGTAAGCAGTTGGAGGATGGCCGTACTTTGAGTGACTACAAC 517993 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||| |||||| || | || ||||| | || | || ||||| || Sbjct 517992 ATTCAGAAGGAGAGCACTCTTCACTTGGTGCTTCGCCTTCGTGGTGGTAT 517943 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434917905280320