Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20pachydermatis_20[genbank_20GCA_5F001278385.1_202015-09- 02] 91 sequences; 8,150,648 total letters Query= NC_029304.1 Length=111246 Score E Sequences producing significant alignments: (Bits) Value seq68 89.7 4e-13 >seq68 Length=564861 Score = 89.7 bits (98), Expect = 4e-13 Identities = 159/230 (69%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849 ||||| ||||| || || ||||||||||| ||| ||||||| | || |||||| | | Sbjct 517944 ATGCAGATTTTCGTCAAGACTCTTACTGGTAAAACTATTACATTGGAAGTCGAATCCTCG 517885 Query 27850 GAC--GATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907 ||| ||| | || ||||| || || ||||| || || |||| ||| | Sbjct 517884 GACACGATTGATAAC--GTCAAGGCTAAGATCCAGGACAAGGAGGGCATTCCACCGGACC 517827 Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967 | || || | ||||| || || || || |||| || | |||| || ||| |||| Sbjct 517826 AACAGCGTCTTATTTTCGCTGGTAAGCAGCTGGAGGATGGCCGCACTCTGAGCGACTACA 517767 Query 27968 ACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGGC 28017 ||||||| || |||||||| |||| | ||| | ||| ||||||| ||| Sbjct 517766 ACATCCAGAAGGAGAGCACGCTGCACCTTGTTCTCCGTCTGCGTGGTGGC 517717 Score = 84.2 bits (92), Expect = 2e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 27883 GACAAAGAAGGTGTTCCGATGGAGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGAC 27942 ||||| |||||| |||| ||| || ||||| || || ||||| || || || ||||| Sbjct 518307 GACAAGGAAGGTATTCCTCCGGACCAACAACGCTTGATCTTTGCTGGTAAGCAGTTGGAG 518248 Query 27943 GACGAACGCAGCTTGTCCGATTACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTG 28002 || | |||| || ||| ||||||||||| || ||||||||| | || ||||| | Sbjct 518247 GATGGGCGCACTCTGAGCGACTACAACATCCAGAAGGAGAGCACTCTTCACCTGGTTCTC 518188 Query 28003 CGTTTGCGTGGCGG 28016 ||| |||| || || Sbjct 518187 CGTCTGCGCGGTGG 518174 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 355862005326357