Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Malassezia_20pachydermatis_20[genbank_20GCA_5F001278385.1_202015-09-
02] 91 sequences; 8,150,648 total letters
Query= NC_029692.1
Length=362276
Score E
Sequences producing significant alignments: (Bits) Value
seq53 179 9e-40
seq1 170 4e-37
seq68 161 2e-34
seq82 84.2 5e-11
>seq53
Length=642545
Score = 179 bits (198), Expect = 9e-40
Identities = 167/212 (79%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| || ||||||||||| ||||| || |||||||| || || ||||| | |||||
Sbjct 401332 AGCACCAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCC 401273
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| |||||||| || |||||||| ||||| |||||||| ||||||| || |||||||||
Sbjct 401272 TCGAGCTGCTTACCAGCGAAGATCAGGCGCTGTTGGTCCGGAGGAATACCCTCCTTGTCC 401213
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| ||||| || ||||| ||||| || || ||||| || |||||||||
Sbjct 401212 TGGATCTTGGCCTTCACATTCTCGATCGTGTCGGAAGACTCCACCTCAAGGGTGATCGTC 401153
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || ||||| ||||| || ||||| |||||
Sbjct 401152 TTCCCGGTGAGGGTCTTGACGAACACTTGCAT 401121
Score = 98.7 bits (108), Expect = 2e-15
Identities = 110/147 (75%), Gaps = 0/147 (0%)
Strand=Plus/Plus
Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952
|||||| | || || ||||| || ||| ||||||||||||||||| || || ||
Sbjct 498939 ACGAAGGCGCAGTACCAGGTGCAGGGTGCTTTCTTTTTGGATGTTATAGTCACTGAGTGT 498998
Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012
| || || || |||||||| || || ||||| || || ||||| || ||||||| |||
Sbjct 498999 ACGCCCGTCCTCTAGCTGCTTTCCGGCAAAGATCAGACGCTGTTGATCCGGAGGAATTCC 499058
Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCAC 211039
|||||||| || |||||| ||| ||
Sbjct 499059 CTCCTTGTCTTGAATCTTTGCTTTGAC 499085
>seq1
Length=1489072
Score = 170 bits (188), Expect = 4e-37
Identities = 165/212 (78%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| || |||||||||||| ||| || |||||||| || || ||||| | || ||
Sbjct 830628 AGCACCAGGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTGAGGGTGCGGCCGTCC 830687
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
||||||||||| || ||||| || || || |||||||| ||||||| || |||||||||
Sbjct 830688 TCCAGCTGCTTACCAGCGAAAATGAGACGCTGTTGGTCCGGAGGAATACCCTCCTTGTCC 830747
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| ||||| || ||||| ||||| ||| ||||||||||| |||||||||
Sbjct 830748 TGGATCTTGGCCTTCACATTGTCGATCGTGTCCGAGGACTCAACCTCGAGCGTGATCGTC 830807
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || || |||||||| || || | |||||
Sbjct 830808 TTGCCAGTCAGAGTCTTGACGAAGATTTGCAT 830839
>seq68
Length=564861
Score = 161 bits (178), Expect = 2e-34
Identities = 163/212 (77%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| || |||||||||||| ||| || |||||||| || || || || | |||||
Sbjct 518189 AGAACCAGGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGCCCATCC 518248
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|||| |||||| || || ||||| | |||||||||||| ||||||| ||||||||||||
Sbjct 518249 TCCAACTGCTTACCAGCAAAGATCAAGCGTTGTTGGTCCGGAGGAATACCTTCCTTGTCC 518308
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| ||||| || ||||| ||||| || || ||||| || |||||||||
Sbjct 518309 TGGATCTTAGCCTTCACATTGTCGATCGTGTCTGAAGACTCCACCTCCAGGGTGATCGTC 518368
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || ||||| ||||| || || | |||||
Sbjct 518369 TTGCCAGTGAGCGTCTTAACGAAAATTTGCAT 518400
Score = 156 bits (172), Expect = 1e-32
Identities = 170/223 (76%), Gaps = 2/223 (1%)
Strand=Plus/Plus
Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATC-CGCAAGGG 210951
|||||| | || || | |||||||||| ||| || || ||||| || || | ||| |
Sbjct 517951 ACGAAGGCGAAGCACCAAGTGAAGAGTGCTCTCCTTCTGAATGTTGTAGTCACTCAAAG- 518009
Query 210952 TCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTC 211011
| | ||||| |||| |||||| || ||||| ||||| || |||||||| ||||||| |
Sbjct 518010 TACGGCCATCCTCCAACTGCTTACCAGCGAAAATAAGACGCTGTTGGTCGGGAGGAATAC 518069
Query 211012 CTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGA 211071
||||||||||||||||||| ||||| || ||||| ||||| || || ||||| |
Sbjct 518070 CTTCCTTGTCCTGGATCTTAGCCTTCACATTGTCGATCGTGTCTGAAGACTCCACCTCCA 518129
Query 211072 GAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
| ||||||||||| || || |||||||| || || | |||||
Sbjct 518130 GGGTGATCGTCTTGCCAGTAAGAGTCTTGACGAAGATTTGCAT 518172
Score = 140 bits (154), Expect = 8e-28
Identities = 158/212 (75%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| |||||||| || ||| ||| || |||||||| || || || || | |||||
Sbjct 517733 AGAACAAGGTGCAGCGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCATCC 517792
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
||||||||||| || ||||| ||||| || |||||||| || |||| || |||||||||
Sbjct 517793 TCCAGCTGCTTACCAGCGAAAATAAGACGCTGTTGGTCCGGTGGAATGCCCTCCTTGTCC 517852
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| || ||||| || || ||||| ||| ||| || || | || || ||
Sbjct 517853 TGGATCTTAGCCTTGACGTTATCAATCGTGTCCGAGGATTCGACTTCCAATGTAATAGTT 517912
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || || |||||||| || || | ||||||
Sbjct 517913 TTACCAGTAAGAGTCTTGACGAAAATCTGCAT 517944
>seq82
Length=260308
Score = 84.2 bits (92), Expect = 5e-11
Identities = 124/176 (70%), Gaps = 0/176 (0%)
Strand=Plus/Plus
Query 139806 CCTTCCAAAGAAGCACGGAAGAGGAGGACAATCTGCTCTGCGTTTTGAAAGACTTCGAAA 139865
||| || |||||||||||| | || || || || || ||||||| | || || |
Sbjct 179280 CCTCCCGAAGAAGCACGGACGTGGTGGTCAGTCCGCGTTGCGTTTCTCGCGTCTGCGTGA 179339
Query 139866 GGAAAAGAGGCACAACTACTTGAGAAAAGTTGCAGAGAACGCAATACAGTGTTTTATCAA 139925
|| | || ||||| || | ||||| || ||| |||| | ||| |||||||
Sbjct 179340 TGAGGCTCGTCATAACTATGTGCGTAAAGTCGCTGAGTACGCTACCCAGCACTTTATCAC 179399
Query 139926 AGACAACAAGTGTTTTGTTTCTGGTATTGTTTTGGCAGGTTCCGCAGAGTTCAAGA 139981
|||||||||||| ||| ||||| |||| ||||| ||||| || || |||||||
Sbjct 179400 CGACAACAAGTGTAATGTGACTGGTCTTGTGTTGGCTGGTTCTGCCGATTTCAAGA 179455
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1159150648501215
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |