Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20pachydermatis_20[genbank_20GCA_5F001278385.1_202015-09- 02] 91 sequences; 8,150,648 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq68 161 2e-34 seq53 161 2e-34 seq1 149 1e-30 seq25 131 4e-25 >seq68 Length=564861 Score = 161 bits (178), Expect = 2e-34 Identities = 169/222 (76%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| | || || | ||| |||||| || || || | ||||| || |||||| Sbjct 517951 ACGAAGGCGAAGCACCAAGTGAAGAGTGCTCTCCTTCTGAATGTTGTAGTCACTCAAAGT 518010 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | ||||| || | |||||| |||||||| ||||| || ||||||||||| |||||||| Sbjct 518011 ACGGCCATCCTCCAACTGCTTACCAGCGAAAATAAGACGCTGTTGGTCGGGAGGAATACC 518070 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 ||||||||| |||||||| ||||||| ||||| |||||||| | ||||| || | Sbjct 518071 TTCCTTGTCCTGGATCTTAGCCTTCACATTGTCGATCGTGTCTGAAGACTCCACCTCCAG 518130 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 |||||||||||||| || | ||| || | ||| | |||||| Sbjct 518131 GGTGATCGTCTTGCCAGTAAGAGTCTTGACGAAGATTTGCAT 518172 Score = 158 bits (174), Expect = 3e-33 Identities = 162/212 (76%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || ||||| |||||| || || |||| ||||| ||| || ||| | |||||| Sbjct 518189 AGAACCAGGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGCCCATCC 518248 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || | |||||| ||||| ||||| | ||||||||||| || ||||||||||||||||| Sbjct 518249 TCCAACTGCTTACCAGCAAAGATCAAGCGTTGTTGGTCCGGAGGAATACCTTCCTTGTCC 518308 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||||||| ||||| |||||||| | ||||| || | ||||||||| Sbjct 518309 TGGATCTTAGCCTTCACATTGTCGATCGTGTCTGAAGACTCCACCTCCAGGGTGATCGTC 518368 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| || | || || | ||| | |||||| Sbjct 518369 TTGCCAGTGAGCGTCTTAACGAAAATTTGCAT 518400 >seq53 Length=642545 Score = 161 bits (178), Expect = 2e-34 Identities = 169/222 (76%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| || | ||| || ||||| ||||| || || || |||| ||||| ||| || || Sbjct 401342 ACGCAGGCGCAGCACCAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGGGT 401283 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | ||||| || |||||||| ||||||||||| || || |||||||| || |||||||| Sbjct 401282 GCGGCCATCCTCGAGCTGCTTACCAGCGAAGATCAGGCGCTGTTGGTCCGGAGGAATACC 401223 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 |||||||| |||||||| ||||||| ||||| ||||| || | ||||| || | Sbjct 401222 CTCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATCGTGTCGGAAGACTCCACCTCAAG 401163 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||||||||| || || | || || | |||||||||||| Sbjct 401162 GGTGATCGTCTTCCCGGTGAGGGTCTTGACGAACACTTGCAT 401121 Score = 98.7 bits (108), Expect = 2e-15 Identities = 109/144 (76%), Gaps = 1/144 (1%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| | ||| || ||||| || ||| ||||||||||| || || || | || Sbjct 498939 ACGAAGGCGCAGTACCAGGTGCAGGGTGCTTTCTTTTTGGATGTTATAGTCACTGAGTGT 498998 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | ||| || ||||||||||| || || ||||| || || ||||| || || ||||| || Sbjct 498999 ACGCCCGTCCTCTAGCTGCTTTCCGGCAAAGATCAGACGCTGTTGATCCGGAGGAATTCC 499058 Query 225612 TTCCTTGTCTTGGATCTTTTGCTT 225635 ||||||||||| ||| ||||||| Sbjct 499059 CTCCTTGTCTTGAATC-TTTGCTT 499081 >seq1 Length=1489072 Score = 149 bits (164), Expect = 1e-30 Identities = 160/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || ||||| |||||| || || |||| ||||| ||| | || | || || Sbjct 830628 AGCACCAGGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTGAGGGTGCGGCCGTCC 830687 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| |||||||| || || || |||||||| || |||||||| |||||||| Sbjct 830688 TCCAGCTGCTTACCAGCGAAAATGAGACGCTGTTGGTCCGGAGGAATACCCTCCTTGTCC 830747 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||||||| ||||| ||||| |||| || || || | |||||||||| Sbjct 830748 TGGATCTTGGCCTTCACATTGTCGATCGTGTCCGAGGACTCAACCTCGAGCGTGATCGTC 830807 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| |||| ||| || | ||| | |||||| Sbjct 830808 TTGCCAGTCAGAGTCTTGACGAAGATTTGCAT 830839 >seq25 Length=28094 Score = 131 bits (144), Expect = 4e-25 Identities = 174/242 (72%), Gaps = 0/242 (0%) Strand=Plus/Minus Query 7478 TAGGTACTATATTTTCTATGATTATAAGGTTAGAATTAGCTGCTCCGGGTTCTCAAATAT 7537 |||| || || || ||| | |||| | |||| | |||||||| ||| |||| | Sbjct 23071 TAGGAACAATGTTCTCTGTACTTATTCGTGCAGAACTTGCTGCTCCTGGTGTTCAAGTTC 23012 Query 7538 TGAGTGGTAATAGCCAACTTTACAACGTTATTATTACGGCGCATGCCTTTGTTATGATTT 7597 | |||| || ||||| | || || |||||||| || ||||| || ||||||| | Sbjct 23011 TAGGTGGAAACCATCAACTATTTAATGTAATTATTACAGCACATGCTTTCCTTATGATCT 22952 Query 7598 TCTTTTTTGTTATGCCGGTTATGATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGA 7657 ||||| | |||||||| | | | || || || || ||||||| || | ||| |||||| Sbjct 22951 TCTTTATGGTTATGCCAGCTCTAATGGGAGGATTTGGAAATTACTTTGCACCTGTAATGA 22892 Query 7658 TTGGTGCTCCTGATATGGCTTTTCCAAGGCTTAACAATATAAGTTTTTGATTACTACCGC 7717 |||| || |||||||||||| ||| | || || ||||| ||||| || ||||||| | Sbjct 22891 TTGGAGCAGTTGATATGGCTTTCCCACGACTAAATAATATTAGTTTCTGGCTACTACCTC 22832 Query 7718 CT 7719 || Sbjct 22831 CT 22830 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192529809583154