Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20pachydermatis_20[genbank_20GCA_5F001278385.1_202015-09- 02] 91 sequences; 8,150,648 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq11 141 8e-29 >seq11 Length=163833 Score = 141 bits (156), Expect = 8e-29 Identities = 540/837 (65%), Gaps = 23/837 (3%) Strand=Plus/Minus Query 4281 TCGAAGAAATTAGTTTTGCCTTCTAACGAAATATTTTCCATAAAATCAAACGGATTAGTT 4340 ||||| || || | ||||| | | ||| || || |||||||| ||||| ||||| || Sbjct 12846 TCGAAAAAGTTCGACTTGCCCTGCAGCGAGATGTTCTCCATAAAGTCAAATGGATTCGTC 12787 Query 4341 GCGTTGTAATGTTTTTCACACTTT----AGAGCTACAAGCAATCGGTCAGCTACAAATTC 4396 | || ||| || || | || ||||| || |||| ||||| || ||||| || Sbjct 12786 GAGTGGTAGTGCTT----CGGGTTGCCGAGAGCGACCAGCAGACGGTCGGCCACAAACTC 12731 Query 4397 TATATACTGGCTCATGAGTTC-GCAGTTAATTCCAATTAATCTCACAGGTAGCGCGTATG 4455 || ||||||| |||||| ||| || || || || | |||||| || || | | Sbjct 12730 AATGTACTGGCACATGAGACGAGCA-TTCATGCCGATAAGCGACACAGGCAGAGCCTCCG 12672 Query 4456 TCAAAAACTCTTGTTCTATAGTTACGGCTTCTGTGATTATATCTTTTATTTTATCT---T 4512 ||||||| || | || || | || || || || || || || | | || | Sbjct 12671 TCAAAAAGTCCTTCTCGATCGAGACAGCCTCGGTAATGATGCGGTTGACCGTGTCAGGGT 12612 Query 4513 TAGATGGTTTATTTACTAAGTATCCAAACAATAAACACGCAAAATCACAATGCAAACCTT 4572 || | || || | || | |||| || |||||||| || |||| ||| | Sbjct 12611 GCGAGCGCTTCTTCAG---GTGACTGAACAGCAAGCACGCAAAGTCGGTGTGCAGACCCT 12555 Query 4573 CGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGCATTAAACCTCTCTTTTTAA 4632 |||| | | |||| || ||||| || |||| | || ||||| | ||| | ||| || | Sbjct 12554 CGTCACGGGTAATAAGCTCGTTCGAGAACGACAGACCCGGCATGAGACCACGCTTCTTCA 12495 Query 4633 GCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCTTCTACGGCGGCAAACGCTA 4692 |||| || || | ||||| || || || ||||| ||||| || |||||||||||||| | Sbjct 12494 GCCAGAAGATCGACGCAAACGAGCCCGAGAAGAAGATGCCCTCCACGGCGGCAAACGCCA 12435 Query 4693 CTAATCGGGACCCGAACGA-GCTGGCTTTGTCTTTAATCCATTTTAATGCCCAGTTAGCT 4751 | | || | |||||| || || ||||| |||||| | ||||| | || Sbjct 12434 CAAGGCGCTCCGAGAACGAGGCACGC-TTGTCCGCAATCCAGCGAAGGGCCCACTCGGCC 12376 Query 4752 TTTTTCTTAACGCACGGAATTGTGTATATAGCGTTAAATAATTTACT-TTTTTCAAATGG 4810 || | ||| || ||||| || | |||||||| || | |||| | | Sbjct 12375 TTCTGCTTCACAACGGGAATGGTCTCGATAGCGTTGAA-CAGGTACTCGCGCTGCGCCGT 12317 Query 4811 GTCTTGAATATAAGTGTCTATTAGTAGGCTATACATTTCAGAATGTATATTTTCTATAGC 4870 ||| | || || ||||| || || || || | || || || || || || || Sbjct 12316 GTCGCGGATGTACGTGTCGATGAGCAGCGAGTAGGTCTCCGAGTGAATGTTCTCCATCAT 12257 Query 4871 AATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTGAACTTCGTTACAAAATCTTTC 4930 |||||| || ||||| ||||| | ||| || | || || |||||||| | || | || Sbjct 12256 AATCTGGAAACCGTAGAAGCAGCGAGCCTCCGCCACCTGCACTTCGTTGCTGAAACGCTC 12197 Query 4931 TACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAAAAACGCCAAAACATGAGATAT 4990 | | ||| ||||| || |||||||| || || || ||||| | || | | Sbjct 12196 CAACAGGTTCTCGTTCACAATACCGTCCGACGCGGCGAAGAACGCAAGGACGGTACTCAC 12137 Query 4991 AAAGT---ACTGTTCGTCAGGCTTAAGTTTTTTCCAGTGGGGCAAATCTTTAGTTAAATC 5047 ||||| || | ||| | | | || | ||||| | |||| || || | | ||| Sbjct 12136 AAAGTGACGCTCGTTGTCGTTCATGCGGTTGTCCCAGTCGTGCAAGTCCTTCGACAGATC 12077 Query 5048 AACTTCTTCAACAGTCCAAAACGACGCTTCCGCTTTTTTGTACATAGACCAAATATC 5104 || || ||| | ||||| ||||| || || || || |||||||| | ||| || || Sbjct 12076 GACCTCCTCAGCGGTCCAGAACGAGGCCTCAGCCTTCTTGTACATCGCCCAGATCTC 12020 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427049126375303