Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20pachydermatis_20[genbank_20GCA_5F001278385.1_202015-09- 02] 91 sequences; 8,150,648 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq68 185 2e-41 seq1 172 1e-37 seq53 168 1e-36 seq40 113 9e-20 >seq68 Length=564861 Score = 185 bits (204), Expect = 2e-41 Identities = 177/227 (78%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 ||||||||||| || || || || || | |||||| || || |||||||||||||| Sbjct 517718 CCACCACGCAGACGGAGAACAAGGTGCAGCGTGCTCTCCTTCTGGATGTTGTAGTCGCTC 517777 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || |||||||||||||| || || || || || || || | ||| |||||||| ||| Sbjct 517778 AGAGTGCGGCCATCCTCCAGCTGCTTACCAGCGAAAATAAGACGCTGTTGGTCCGGTGGA 517837 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || ||||||||||| |||||||| || || ||| |||| || |||||||| | ||||||| Sbjct 517838 ATGCCCTCCTTGTCCTGGATCTTAGCCTTGACGTTATCAATCGTGTCCGAGGATTCGACT 517897 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || | || || || ||||| || | |||||| ||||| |||||||| Sbjct 517898 TCCAATGTAATAGTTTTACCAGTAAGAGTCTTGACGAAAATCTGCAT 517944 Score = 181 bits (200), Expect = 2e-40 Identities = 177/228 (78%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||| ||||| || || ||||| || | ||||| || || |||||||||||||| Sbjct 518173 ACCACCGCGCAGACGGAGAACCAGGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCT 518232 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || ||||| |||||||| | || || || ||||||||||| ||||||||||| || Sbjct 518233 CAGAGTGCGCCCATCCTCCAACTGCTTACCAGCAAAGATCAAGCGTTGTTGGTCCGGAGG 518292 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 |||||| |||||||| |||||||| || || || | ||||| ||||| |||| || || Sbjct 518293 AATACCTTCCTTGTCCTGGATCTTAGCCTTCACATTGTCGATCGTGTCTGAAGACTCCAC 518352 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || ||||||||||| || || | ||||||||||| || ||||| Sbjct 518353 CTCCAGGGTGATCGTCTTGCCAGTGAGCGTCTTAACGAAAATTTGCAT 518400 Score = 163 bits (180), Expect = 6e-35 Identities = 173/228 (76%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| |||||||| |||| || | ||||| || || || |||||||||||| Sbjct 517945 ACCACCACGAAGGCGAAGCACCAAGTGAAGAGTGCTCTCCTTCTGAATGTTGTAGTCACT 518004 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 | || ||||||||||| | || || || || || || | ||| |||||||| || Sbjct 518005 CAAAGTACGGCCATCCTCCAACTGCTTACCAGCGAAAATAAGACGCTGTTGGTCGGGAGG 518064 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 |||||| |||||||| |||||||| || || || | ||||| ||||| |||| || || Sbjct 518065 AATACCTTCCTTGTCCTGGATCTTAGCCTTCACATTGTCGATCGTGTCTGAAGACTCCAC 518124 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || ||||||||||| || || | |||||| ||||| || ||||| Sbjct 518125 CTCCAGGGTGATCGTCTTGCCAGTAAGAGTCTTGACGAAGATTTGCAT 518172 >seq1 Length=1489072 Score = 172 bits (190), Expect = 1e-37 Identities = 167/215 (78%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 282885 CGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCA 282944 ||||| ||||| || | ||||| || || |||||||||||||| || |||||||| Sbjct 830625 CGAAGCACCAGGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTGAGGGTGCGGCCG 830684 Query 282945 TCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTG 283004 ||||| || || || || || || || | ||| |||||||| ||||||||||||||| Sbjct 830685 TCCTCCAGCTGCTTACCAGCGAAAATGAGACGCTGTTGGTCCGGAGGAATACCCTCCTTG 830744 Query 283005 TCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATC 283064 || |||||||| || || || | ||||| |||||||| | || || ||||| |||||| Sbjct 830745 TCCTGGATCTTGGCCTTCACATTGTCGATCGTGTCCGAGGACTCAACCTCGAGCGTGATC 830804 Query 283065 GTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| || |||| |||||| ||||| || ||||| Sbjct 830805 GTCTTGCCAGTCAGAGTCTTGACGAAGATTTGCAT 830839 >seq53 Length=642545 Score = 168 bits (186), Expect = 1e-36 Identities = 174/228 (76%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||||||||| || ||||| || | || || || |||||||||||||| Sbjct 401348 ACCACCACGCAGGCGCAGCACCAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGCT 401289 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || |||||||||||||| || || || || || ||||||| || |||||||| || Sbjct 401288 CAGGGTGCGGCCATCCTCGAGCTGCTTACCAGCGAAGATCAGGCGCTGTTGGTCCGGAGG 401229 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||||||||||||||| |||||||| || || || | ||||| ||||| |||| || || Sbjct 401228 AATACCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATCGTGTCGGAAGACTCCAC 401169 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || ||||||||||| || || | ||||| ||||| | ||||| Sbjct 401168 CTCAAGGGTGATCGTCTTCCCGGTGAGGGTCTTGACGAACACTTGCAT 401121 Score = 154 bits (170), Expect = 3e-32 Identities = 126/153 (82%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| ||||| |||||||| || | |||||||||||||||||||| |||||| Sbjct 498933 ACCACCACGAAGGCGCAGTACCAGGTGCAGGGTGCTTTCTTTTTGGATGTTATAGTCACT 498992 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || || || || |||||||| || || ||||||||||||| ||| ||||| || || Sbjct 498993 GAGTGTACGCCCGTCCTCTAGCTGCTTTCCGGCAAAGATCAGACGCTGTTGATCCGGAGG 499052 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTAC 283024 ||| |||||||||||||| ||||||||||| || Sbjct 499053 AATTCCCTCCTTGTCTTGAATCTTTGCTTTGAC 499085 >seq40 Length=1303022 Score = 113 bits (124), Expect = 9e-20 Identities = 303/456 (66%), Gaps = 17/456 (4%) Strand=Plus/Plus Query 316750 TGGTTGGTCGGTTCGTCAAGTAGTAGTAGCTTCGCGTCCAACAGCATAGCGCGTGCGAGA 316809 ||||||||||| || || || || || | | || | ||||||| ||| || || || Sbjct 288194 TGGTTGGTCGGCTCATCGAGCAGCAGAATGTCGGCCTTGAACAGCACAGCACGGGCCAGG 288253 Query 316810 GCAAGCTTCATTTTCCACCCCCCGGAAAGAGTGTTAATCGGGGCAGATTGGCGCTCAACA 316869 ||||||||||| ||||| || || ||||||| | ||||| ||| || |||| | Sbjct 288254 GCAAGCTTCATCTTCCAACCACCCGAAAGAGCAGTGATCGGACCAGCCTGACGCTGCTCG 288313 Query 316870 TCAAAGCCAA-CTGATTCGAGAGTAGACACGATTTTTTCACGAGACCATGTGTTTTCTTT 316928 || ||||| | || ||| || || ||| | | || || | | | || | Sbjct 288314 TCGAAGCCCATCTCCTTC-AGGGTCGACGAGGCAGTCTCGCG-GTCGACGTTCAGGCG-- 288369 Query 316929 AACTTGGTCGTCATTGGCAATGAAGTCAACGATAGACGTGTTAGATTCGGATCCGTCGAG 316988 | | |||| | | ||||| || | || || ||| | || || |||||||| Sbjct 288370 -AGT--GTCGGCCAGG---ATGAACTCGAGAATCGAAATGTCACCCTCCGAACCGTCGAG 288423 Query 316989 GTCATGCTCAACATATGCAGTTTTCAGAATATCCTTCGTCGGGAACCCTTCCAACTGACC 317048 ||| ||||| || || || || | || || |||||| || |||| |||||| Sbjct 288424 GTCGTGCTCGACGTACCAGGTCTTGACCTCCTCAGGCGACGGGAAGCCCTCCACCTGACC 288483 Query 317049 GTTCACAATCGCCCTCATCAGTGTCGACTTGCCAGCACCATTGGGGCCGCAAAGACCATA 317108 |||| || || | ||| || |||||||| || | |||||| | || || ||||| || Sbjct 288484 GTTCTGGATGGCGCGCATAAGGGTCGACTTACCCGAACCATTACGACCACAGAGACCGTA 288543 Query 317109 CCGATTTCCCTTCTTCAGATTAAAACGGGT---GTTGTTCAGAAGAATCTTACCACCATA 317165 || | || ||| ||| | |||| | ||||||| ||||||||| |||| || Sbjct 288544 GCGGTGGCCACGCTTGAGACGCA---GGGTAGCGGTGTTCAGCAGAATCTTAGCACCGTA 288600 Query 317166 TGCCAGAGAGAACTCACAATCACACAGGTCCTCGCC 317201 || || ||||||| ||| | |||||||||||| || Sbjct 288601 GGCGAGCGAGAACTGACAGTTACACAGGTCCTCACC 288636 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046737979567514