Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20restricta_20[genbank_20GCA_5F001264725.1_202015-08-11] 69 sequences; 7,260,223 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq30 149 7e-31 >seq30 Length=52135 Score = 149 bits (164), Expect = 7e-31 Identities = 442/674 (66%), Gaps = 12/674 (2%) Strand=Plus/Minus Query 53996 GGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATC 54055 |||||||| | |||||| ||| ||| | || || || |||||||| | || || | | Sbjct 46848 GGACACATAAGCGACCAGTCTTCGTTCTTCTCAACACGCTTCATAAACAAGTCGGGGACC 46789 Query 54056 CAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGT--TTCCTGTA-TTCTTTTTA 54112 || | || | ||| || || | | | | |||||| || | || ||||| Sbjct 46788 CACAAGGCCAAAAACAGGTCACGAGCAC---GCACCTCGTCTTTGCCGTGGTTCTTGCGC 46732 Query 54113 AGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGTCATAACTCCA 54172 || || | ||| | | | ||| || ||||| || |||| ||| |||| | | || Sbjct 46731 AGGTCAACAAACTCAAACACATCCGAGTGCCATGGCTCCAGGTAGATGGCAAATGCGCCG 46672 Query 54173 GGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATT 54232 || || ||||| || || || || | ||| | || ||||| || | || | | ||| Sbjct 46671 GGGCGCTTGTTGCCACCTTGGTCGACGTAGCGTGCCGTGTTGTTGAATACGCGAAGCATG 46612 Query 54233 GGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATA 54292 || | |||||| || |||| || || |||| ||||| || | ||||| ||| Sbjct 46611 GGCACAATACCGTTACTGACACCGTTCGTGCCGGCAATATACGAGCCTGTAGCACGGATA 46552 Query 54293 TTACTAATTGATAGACCTATCCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAAC 54352 ||| ||| ||||| || || || ||| | || || || | || || || | Sbjct 46551 TTATGAATGTTCAGACCAATACCGCCGGCCGTCTTCGAAATCATAGCACAGGTCTTGAGT 46492 Query 54353 GTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATT 54412 || || ||||| ||||| || || ||| ||||| | | || || || |||||| Sbjct 46491 GTGTCGTAGATACCCTCGATCGAGTCGTCCTTCATGCTCACGAGGAAGCACGACGACATT 46432 Query 54413 TGGTGA--CGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTT 54470 || || || | || || || || || | || || || ||||||||||| |||| Sbjct 46431 TGCGGATTCGGC--GTACCAGCGTTGAACAGCGTGGGCGATGCGTGCGTAAAAGCCTTTT 46374 Query 54471 CAGAAA-GTAGATTGTACGTCTCGATAGCTGAGTCTATATCCCATTGATGAATTCCTACT 54529 |||| | |||| ||||| ||||| || || || || || ||||| ||||| Sbjct 46373 CAGACATGTAG-TTGTAGGTCTCAATCGCGCTCTCAATGTCTTCGCCGTGAATACCTACA 46315 Query 54530 GCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAGCAAG 54589 || |||||||| | |||||||||||| | ||| | | |||| || || ||||| | Sbjct 46314 GCCACACGCATAAGCATGTGCTGAGGCCGCTCAGCCACCTTGCCATTGATGCGCAGCAGG 46255 Query 54590 TAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATA 54649 || || |||| ||| || || || ||| ||||||| ||||| || ||||||||| Sbjct 46254 TATGAACGCTCCAGAGTCTTGAATCCGAAAAAGTTGTAGTGGAAGTCGCGGTCGTAAATA 46195 Query 54650 ATAACTGAGTTGAG 54663 ||| | |||| ||| Sbjct 46194 ATAGCAGAGTCGAG 46181 Score = 138 bits (152), Expect = 1e-27 Identities = 391/597 (65%), Gaps = 8/597 (1%) Strand=Plus/Plus Query 24126 AACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAA 24185 |||| || || || || || ||| ||||||||||| | ||| | ||||| || Sbjct 33702 AACAGCAGGCACGCAAAGTCAGTGTGCAGACCCTCGTCACGCGAAATAAGCTCGTTCGAG 33761 Query 24186 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCA 24245 |||| || |||||||| || |||||||| || ||||| || || || || || || || Sbjct 33762 AACGACAGACCGGGCATGAGACCACGCTTCTTGAGCCAGAAGATCGAGGCGAACGAGCCC 33821 Query 24246 GAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATAAC-CGGCGC- 24303 || ||||| || || ||||| ||||||||||| | ||| | || | | ||| ||| | Sbjct 33822 GAGAAGAAGATGCCCTCTACGGCCGCAAAGGCCACAAGGCGCTC-CGAGAACGAGGCACG 33880 Query 24304 --TGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTC 24361 |||| ||||| | ||||| ||||||||||| || ||| ||| || ||||| Sbjct 33881 CTTGTCCGAGATCCAGCGAAGCGCCCACTCGGCCTTCTTCTTCACAACAGGGATCGTCTC 33940 Query 24362 TATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAG 24421 ||||| || || || || | | || | || || ||||||| || Sbjct 33941 GATAGCGTTGAACAGGAAGGCGCGCTGCTCGGGCTCGCGGATGTACGTGTCAATCAGGAG 34000 Query 24422 ACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGC 24481 ||| | ||||| || ||||| ||||| || || || ||||| || || | ||| Sbjct 34001 CGAGTACGTCTCCGAGTGGATGTTCTCAATCATGATCTGGAAACCGTAAAAGCAGCGAGC 34060 Query 24482 CTCGGTAATCTGTACTTCTATACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTC 24541 |||||| ||| || || | | || || || | | ||| || ||||| || || || Sbjct 34061 CTCGGTCGCCTGGACCTCGGTGCTGAAGCGCTCCACGAGATTCTCGTTCACAATACCATC 34120 Query 24542 ACTGGCTGCAAAAAACGCCAATACATGTTTTATAAA---ATATTTTTCGTCTGGTGTTAG 24598 || || ||||| |||| ||||| | | ||| | | |||| | | | Sbjct 34121 CGACGCAGCGAAAAAGGCCAGCACATGGCTCACAAAGTGACGCTCACCGTCCGTCATGCG 34180 Query 24599 TTTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGC 24658 || | ||| ||||| | || || || | || | || || | ||||| || || || Sbjct 34181 GTTGTCCCAGTCATTCAGGTCGTTCGACAGGTCAATCTCCTCGGCGGTCCAGAACGACGC 34240 Query 24659 CTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAA 24715 ||| ||||| || ||||| | |||||| || || || |||| || || | ||||| Sbjct 34241 CTCGGCCTTCTTGTACATCTGCCAGATCTCGTGGTAGCGAATCGGGAAGAGCACAAA 34297 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593721087915120