Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20restricta_20[genbank_20GCA_5F001264725.1_202015-08-11] 69 sequences; 7,260,223 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq30 435 3e-117 seq67 131 2e-25 seq17 122 9e-23 seq22 89.7 5e-13 >seq30 Length=52135 Score = 435 bits (482), Expect = 3e-117 Identities = 604/832 (73%), Gaps = 13/832 (2%) Strand=Plus/Minus Query 116595 ACCCCCGCCGGTTCGTGATTTTCCCCATACAATACCCGGACATGTGGCGCATGTACAAAA 116654 |||| |||| || ||| | ||||| || | |||| || || |||| |||||||| | Sbjct 34308 ACCCTGGCCGTTTTGTGCTCTTCCCGATTCGCTACCACGAGATCTGGCAGATGTACAAGA 34249 Query 116655 AGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTGTCCAAGGACACGAGCGACT 116714 |||||||||||||||||||||||| ||||||| | |||||||| || ||| || |||| Sbjct 34248 AGGCCGAGGCGTCGTTCTGGACCGCCGAGGAGATTGACCTGTCGAACGACCTGAATGACT 34189 Query 116715 GGGAG---CGCTTGAACGACAACGAGCGCCATTTCATCAAGCACGTGCTGGCCTTTTTCG 116771 |||| ||| ||| ||| ||||| || || | | || |||||||||||||||| Sbjct 34188 GGGACAACCGCATGACGGACGGTGAGCGTCACTTTGTGAGCCATGTGCTGGCCTTTTTCG 34129 Query 116772 CCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGTTTC-GCTCAGGAGGTGCAG 116830 | || || || || || ||||||||||| || ||||| ||| || | | |||| ||| Sbjct 34128 CTGCGTCGGATGGTATTGTGAACGAGAATCTCGTGGAGCGCTTCAGCACCG-AGGTCCAG 34070 Query 116831 GTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATGGAGAACGTGCACTCGGAA 116890 | | ||||||| || ||||| ||||| || |||||| || |||||| | |||||||| Sbjct 34069 GCGACCGAGGCTCGCTGCTTTTACGGTTTCCAGATCATGATTGAGAACATCCACTCGGAG 34010 Query 116891 ATGTATTCGACCCTCATCGACACGTACGTGCGCTCTTCGGAGGAGAAGCTCCGTT-TGTT 116949 | ||| ||| ||| || ||||||||| | ||| | ||| || || || | |||| Sbjct 34009 ACGTACTCGCTCCTGATTGACACGTACATCCGCGAGCCCGAGCAGC-GCGCCTTCCTGTT 33951 Query 116950 GAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCCGAGTGGGCGCTGCGCTGGAT 117009 ||||| ||||||||||| || || || ||||||||||||||||||| |||||||| Sbjct 33950 CAACGCTATCGAGACGATCCCTGTTGTGAAGAAGAAGGCCGAGTGGGCGCTTCGCTGGAT 33891 Query 117010 CGCCGGCAGAGAG-GCCGCCTTCGGCGAGCGCCTGGTGGCCTTCGCGGCCGTCGAGGGCG 117068 | | | || || | ||| | ||| |||||||| |||||||| |||||||| |||||| Sbjct 33890 CTCGGACA-AGCGTGCCTCGTTCTCGGAGCGCCTTGTGGCCTTTGCGGCCGTAGAGGGCA 33832 Query 117069 TCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAGAAACGCGGCCTCATGCCCG 117128 ||||||| |||||| |||||| | || || ||||||||||| || || |||||||||| Sbjct 33831 TCTTCTTCTCGGGCTCGTTCGCCTCGATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCCG 33772 Query 117129 GCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGGTCTGCATTGCGACTTTGCCT 117188 | ||| | ||| |||||||| || || | |||||||||||||| |||||||| | Sbjct 33771 GTCTGTCGTTCTCGAACGAGCTTATTTCGCGTGACGAGGGTCTGCACACTGACTTTGCGT 33712 Query 117189 GTTTGCTGTTCAAGCATTTGGTGCAGCGACCG-AGCGCGGCGCGCGTCAGGGAGATCGTC 117247 | ||||||||| || || | |||| || | | || | || || | || | Sbjct 33711 GCCTGCTGTTCAGCCACCTGAAGAAGCGCTCGCACCCCGACACG-GTGAACCGCATTATT 33653 Query 117248 ACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCACCGAAGCGCTGCCGGTGCGTCTGCTG 117307 || || || || ||||| |||||| ||| | | || || ||||| || || | Sbjct 33652 ACGGAGGCTGTGGCCATTGAGCAGGACTTTTTGTCGGATGCCCTGCCCGTCTCGCTCATT 33593 Query 117308 GGACTCAATTGCGAAAC-GATGTCGCAATACATCGAGTTCGTCGCCGACAGGCTGCTGCT 117366 || | || |||| | ||||| || ||||| || || || || ||| | |||||| | Sbjct 33592 GGTATGAA-TGCGCGCCTGATGTGCCAGTACATTGAATTTGTGGCGGACCGCCTGCTGGT 33534 Query 117367 CGAGCTGGTCGGCGCCAAGCACTACAACACGCCCAACCCGCTGGACTTTATG 117418 | ||||| | || | ||||||||| || || | ||||| | ||||||||| Sbjct 33533 GGCGCTGGGCTGCCCGAAGCACTACCACTCGACGAACCCCTTTGACTTTATG 33482 >seq67 Length=407448 Score = 131 bits (144), Expect = 2e-25 Identities = 155/210 (74%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| || || || || ||||| || ||||| |||| ||||| | | Sbjct 70853 ATGCAAATCTTCGTCAAGACCCTGACTGGCAAGACGATCACGCTCGAGGTCGAGTCGTCT 70794 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | |||| || || | ||||| ||||| || || ||||||| Sbjct 70793 GACACGATCGACAATGTGAAGGCCAAGATCCAGGACAAGGAGGGTATTCCTCCGGACCAA 70734 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || || |||| |||||| || |||||||| |||| || || |||| |||||||||| Sbjct 70733 CAGCGTCTTATCTTCGCGGGTAAGCAGCTGGAGGACGGCCGTACGCTCAGCGACTACAAC 70674 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899 ||||| |||||| | ||||| ||||| ||| Sbjct 70673 ATCCAAAAGGAGTCGACGCTCCATCTCGTG 70644 >seq17 Length=189903 Score = 122 bits (134), Expect = 9e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||| | ||||| || || | ||||| || || |||||| |||| || || | || Sbjct 58189 ATGCAAGTGTTCGTCAAGACCTTGACGGGTAAGACGATCACCCTCGAGGTGGAGTCTTCC 58248 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | |||| || || | ||||| ||||| || || ||||||| Sbjct 58249 GACACGATCGAGAATGTGAAGGCCAAGATCCAGGACAAGGAGGGTATTCCTCCGGACCAA 58308 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || || |||| || || || |||||||| || | ||||| || | |||||||||| Sbjct 58309 CAGCGTCTGATCTTTGCCGGTAAGCAGCTGGAGGATGGCCGCACGCTGAGCGACTACAAC 58368 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 |||||||||||| | |||||||| || ||| | ||| || | || || Sbjct 58369 ATCCAGAAGGAGTCGACGCTGCACCTGGTGCTTCGCCTGCGTGGTGG 58415 >seq22 Length=111201 Score = 89.7 bits (98), Expect = 5e-13 Identities = 157/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || ||||| ||| ||||| | ||||| | |||||||||| | Sbjct 102391 ATGCAGATTTTTGTCAAAACACTCTCGGGCTCCTCTATCACGCTGGACGTCGAAGAGTCA 102450 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 || | |||| | | ||| |||||| || ||||||||||| | || || Sbjct 102451 GATACCGTGGATCATGTAAAGACTCAAATTCAGCGTAAGCAGGGCATCCCCCCCGATGAG 102510 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || || ||| || ||||| ||||| || |||| ||||| || ||||||||| | Sbjct 102511 CAGCGCCTTCTCTTTGCCGGCAAGCAGCTCGAAGACGGCCGCACGCTGAACGACTACCAG 102570 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGCG 40918 ||||| || || | ||||||||||| | |||| || | || |||| Sbjct 102571 ATCCAAAAAGAATCGACGCTGCATCTCGAACTGCGTCTGCGTGGTGGCG 102619 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515218755623440