Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20restricta_20[genbank_20GCA_5F001264725.1_202015-08-11] 69 sequences; 7,260,223 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq67 114 1e-20 seq17 105 6e-18 seq30 89.7 4e-13 >seq67 Length=407448 Score = 114 bits (126), Expect = 1e-20 Identities = 149/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 118536 TGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGT 118595 |||| || ||||| ||||| |||||||| ||||| | || || ||||| ||||| Sbjct 70651 TGGAGCGTCGACTCCTTTTGGATGTTGTAGTCGCTGAGCGTACGGCCGTCCTCCAGCTGC 70710 Query 118596 TTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTT 118655 || || ||| |||| |||||||| || || ||||| || ||||||||||| || || Sbjct 70711 TTACCCGCGAAGATAAGACGCTGTTGGTCCGGAGGAATACCCTCCTTGTCCTGGATCTTG 70770 Query 118656 TGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTC 118715 || || | |||| ||||| | ||||||||||| || | ||| ||||| ||| Sbjct 70771 GCCTTCACATTGTCGATCGTGTCAGACGACTCGACCTCGAGCGTGATCGTCTTGCCAGTC 70830 Query 118716 AGAGTTTTTACAAAAATCTGCATGGC 118741 || || || || || || |||||||| Sbjct 70831 AGGGTCTTGACGAAGATTTGCATGGC 70856 >seq17 Length=189903 Score = 105 bits (116), Expect = 6e-18 Identities = 150/211 (71%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 ||||| ||| | || ||||| || || |||||||| ||||||| ||||| |||||| Sbjct 58398 CACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGCGTGCGGCCATCCTC 58339 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648 ||||| || || || |||| |||||||| || || ||||| || ||||||||||| Sbjct 58338 CAGCTGCTTACCGGCAAAGATCAGACGCTGTTGGTCCGGAGGAATACCCTCCTTGTCCTG 58279 Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708 || || || || | |||| ||||| | ||| ||||||| ||| | ||| || Sbjct 58278 GATCTTGGCCTTCACATTCTCGATCGTGTCGGAAGACTCCACCTCGAGGGTGATCGTCTT 58219 Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCATG 118739 || |||| || || || || | |||||| Sbjct 58218 ACCCGTCAAGGTCTTGACGAACACTTGCATG 58188 >seq30 Length=52135 Score = 89.7 bits (98), Expect = 4e-13 Identities = 173/251 (69%), Gaps = 6/251 (2%) Strand=Plus/Minus Query 134376 CCGCCGCCCAGATTCGAAATCAACGCGGAC-TCGTGTAGAGTCTTGTAAATGCCATCGAC 134434 |||||| || |||||||||| || | || || || || | ||| || || |||| Sbjct 46530 CCGCCGGCCGTCTTCGAAATCATAGCACAGGTCTTG-AGTGTGTCGTAGATACCCTCGAT 46472 Query 134435 GCTGTCGTCCTTGATGCTTTGCAGGAAACACGAACACATTTGTTGACGACGCGTACCCGC 134494 ||||||||| ||||| ||||| ||||| ||||||| || ||||||| || Sbjct 46471 CGAGTCGTCCTTCATGCTCACGAGGAAGCACGACGACATTTGCGGATTCGGCGTACCAGC 46412 Query 134495 CGAAAACAGAGTCGGGCTCGCGTGCGTAAAGG--TGCCCAGACTCATCAACTGATATGTT 134552 ||||| || || ||||||||||| | | ||||| || | | || || Sbjct 46411 GTTGAACAGCGTGGGCGATGCGTGCGTAAAAGCCTTTTCAGAC--ATGTAGTTGTAGGTC 46354 Query 134553 TCAATGACGCTCTTAACGTCGTCGCCGTGAATGGCCAGAGCGACGCGCATGAGCATGTGT 134612 ||||| |||||| || ||| ||||||||||| | | ||| || ||||| |||||||| Sbjct 46353 TCAATCGCGCTCTCAATGTCTTCGCCGTGAATACCTACAGCCACACGCATAAGCATGTGC 46294 Query 134613 TGGGGTCTCTC 134623 || || | ||| Sbjct 46293 TGAGGCCGCTC 46283 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433830035175748