Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20restricta_20[genbank_20GCA_5F001264725.1_202015-08-11] 69 sequences; 7,260,223 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq30 161 1e-34 >seq30 Length=52135 Score = 161 bits (178), Expect = 1e-34 Identities = 636/990 (64%), Gaps = 14/990 (1%) Strand=Plus/Minus Query 63234 GGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATC 63293 |||||||| | |||||| ||| ||| | || || || |||||||| | || || | | Sbjct 46848 GGACACATAAGCGACCAGTCTTCGTTCTTCTCAACACGCTTCATAAACAAGTCGGGGACC 46789 Query 63294 CAAAGAGCTATAAATAGATCTCTTGTTCTATGTTCCTCGT--TTCCTGTA-TTCTTTTTA 63350 || | || | ||| || || | | | | |||||| || | || ||||| Sbjct 46788 CACAAGGCCAAAAACAGGTCACGAGCAC---GCACCTCGTCTTTGCCGTGGTTCTTGCGC 46732 Query 63351 AGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCA 63410 || || | ||| | | | ||| || ||||| || |||| ||| ||||| | | || Sbjct 46731 AGGTCAACAAACTCAAACACATCCGAGTGCCATGGCTCCAGGTAGATGGCAAATGCGCCG 46672 Query 63411 GGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATT 63470 || || ||||| || || || || | ||| | || ||||| || | || | | ||| Sbjct 46671 GGGCGCTTGTTGCCACCTTGGTCGACGTAGCGTGCCGTGTTGTTGAATACGCGAAGCATG 46612 Query 63471 GGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCCTCCACTGGCACGAATA 63530 || | ||||||||| | ||| || || |||| ||||| || | ||||| ||| Sbjct 46611 GGCACAATACCGTTACTGACACCGTTCGTGCCGGCAATATACGAGCCTGTAGCACGGATA 46552 Query 63531 TTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAAC 63590 ||| ||| ||||| || || || ||| | || || || | || || || | Sbjct 46551 TTATGAATGTTCAGACCAATACCGCCGGCCGTCTTCGAAATCATAGCACAGGTCTTGAGT 46492 Query 63591 GTGTCATAGATGCCTTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATT 63650 ||||| ||||| || || || || || ||||| | | || || || |||||| Sbjct 46491 GTGTCGTAGATACCCTCGATCGAGTCGTCCTTCATGCTCACGAGGAAGCACGACGACATT 46432 Query 63651 TGGTGACGAGTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCA 63710 || || | || || || || || | || || || ||||||||||| |||||| Sbjct 46431 TGCGGATTCGGCGTACCAGCGTTGAACAGCGTGGGCGATGCGTGCGTAAAAGCCTTTTCA 46372 Query 63711 GA-AAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGC 63769 || | |||| ||||| |||||||| || || || || ||||| ||||| || Sbjct 46371 GACATGTAG-TTGTAGGTCTCAATCGCGCTCTCAATGTCTTCGCCGTGAATACCTACAGC 46313 Query 63770 GACACGCATTAACATGTGCTGAGGTCTTTCAACAATTTTGTTGTTTATTTTCAACAAGTA 63829 |||||||| | |||||||||||| | ||| | | ||| || || || || ||| Sbjct 46312 CACACGCATAAGCATGTGCTGAGGCCGCTCAGCCACCTTGCCATTGATGCGCAGCAGGTA 46253 Query 63830 GGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAAT 63889 || |||| ||| || || || ||| ||||||| ||||| || ||||||||||| Sbjct 46252 TGAACGCTCCAGAGTCTTGAATCCGAAAAAGTTGTAGTGGAAGTCGCGGTCGTAAATAAT 46193 Query 63890 AACCGAATTGAGCTTATCCTTATATTTGTTAACTATATCCATGGTAATACTT--GAAATA 63947 | | || | |||| || | || | || | | | || ||| ||||| Sbjct 46192 AGCAGAGTCGAGCACGTCGCGGTGCTTCATCACGGTGTGGAACGT--CTCTTCAGAAATC 46135 Query 63948 ATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCA 64007 || | || || || | || || || ||||||| | | ||||| || || | Sbjct 46134 ATAGAGCTGTGCTTGCCCGTCTTCGGGTTCACATAGTCGTGCAGATCCTGAATGACCTGG 46075 Query 64008 CTAAATAGtttttttGTTTCCTTGTGTAGATTTGATATGGCTATTCTGGCGGCTAGAATG 64067 ||||| || || || |||||||| || || ||||| || | ||||| || | | Sbjct 46074 CTAAAGCCCTTCTTCGTCTCCTTGTGCAGGTTGCTGATGGCGATACGCGCGGCCAGCACG 46015 Query 64068 GCATAATCCGGATGTTGTGTAGTACAAGT-GGCTGCTATTTCGGCTGCCAGAGTGTCCAA 64126 || || || |||||| || || | || ||| || | || || || || |||||| Sbjct 46014 GCGTAGTCGGGATGTGTCGTGGT-CTTGTAGGCAGCCGTCTCAGCAGCTAGGTTGTCCAG 45956 Query 64127 TTCTACCGTTGTTACTCCATTATATATTCCTTGAATAACCTTCATAGCTATTTTAATAGG 64186 || ||||| || ||||| | || || || | ||| ||||| || |||| || || Sbjct 45955 CTCGACCGTGGTAACTCCTTCGTAGATACCGTCAATTACCTTGCGAGTAATTTCGATGGG 45896 Query 64187 ATCTATATGATCCGTGTTTAAGCCATAGCA 64216 ||| || | | | ||| | ||||||||| Sbjct 45895 ATCAATGTAGTTCATGTCAAGGCCATAGCA 45866 Score = 156 bits (172), Expect = 5e-33 Identities = 395/597 (66%), Gaps = 8/597 (1%) Strand=Plus/Plus Query 33573 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAA 33632 |||| || || || || || ||||||||||||||| | ||| | ||||| || Sbjct 33702 AACAGCAGGCACGCAAAGTCAGTGTGCAGACCCTCGTCACGCGAAATAAGCTCGTTCGAG 33761 Query 33633 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCG 33692 |||| || |||||||| || |||||||| || ||||| || || || ||||| || || Sbjct 33762 AACGACAGACCGGGCATGAGACCACGCTTCTTGAGCCAGAAGATCGAGGCGAACGAGCCC 33821 Query 33693 GAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAAC-CGGCGC- 33750 || |||||||| || ||||| || |||||||| | ||| | ||| | | ||| ||| | Sbjct 33822 GAGAAGAAGATGCCCTCTACGGCCGCAAAGGCCACAAGGCGCTC-CGAGAACGAGGCACG 33880 Query 33751 --TGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTC 33808 |||| ||||| | ||||| ||||||||||| || ||| ||| ||||| || Sbjct 33881 CTTGTCCGAGATCCAGCGAAGCGCCCACTCGGCCTTCTTCTTCACAACAGGGATCGTCTC 33940 Query 33809 TATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAG 33868 || || || || || || | | || | || || || |||| || Sbjct 33941 GATAGCGTTGAACAGGAAGGCGCGCTGCTCGGGCTCGCGGATGTACGTGTCAATCAGGAG 34000 Query 33869 ACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGC 33928 ||| | ||||| || ||||| ||||| ||||| || ||||| || || | ||| Sbjct 34001 CGAGTACGTCTCCGAGTGGATGTTCTCAATCATGATCTGGAAACCGTAAAAGCAGCGAGC 34060 Query 33929 CTCGGTAATCTGCACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCATC 33988 |||||| ||| || || || | || || || | | ||| || ||||| || ||||| Sbjct 34061 CTCGGTCGCCTGGACCTCGGTGCTGAAGCGCTCCACGAGATTCTCGTTCACAATACCATC 34120 Query 33989 ACTGGCTGCAAAAAACGCCAATACATGTTTTATAAA---ATATTTTTCGTCTGGTGTTAG 34045 || || ||||| |||| ||||| | | ||| | | |||| | | | Sbjct 34121 CGACGCAGCGAAAAAGGCCAGCACATGGCTCACAAAGTGACGCTCACCGTCCGTCATGCG 34180 Query 34046 TTTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGC 34105 || | ||| ||||| | || || || | || | || || | ||||| || || || Sbjct 34181 GTTGTCCCAGTCATTCAGGTCGTTCGACAGGTCAATCTCCTCGGCGGTCCAGAACGACGC 34240 Query 34106 CTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGGATTGGGAAAATAACAAA 34162 ||| ||||| || ||||| | |||||| || || || | || ||||| | ||||| Sbjct 34241 CTCGGCCTTCTTGTACATCTGCCAGATCTCGTGGTAGCGAATCGGGAAGAGCACAAA 34297 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629817056782320