Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20restricta_20[genbank_20GCA_5F001264725.1_202015-08-11] 69 sequences; 7,260,223 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq30 147 3e-30 >seq30 Length=52135 Score = 147 bits (162), Expect = 3e-30 Identities = 393/597 (66%), Gaps = 8/597 (1%) Strand=Plus/Plus Query 36149 AACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAA 36208 |||| || || || || || ||| ||||||||||| | ||| | ||||| || Sbjct 33702 AACAGCAGGCACGCAAAGTCAGTGTGCAGACCCTCGTCACGCGAAATAAGCTCGTTCGAG 33761 Query 36209 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCA 36268 |||| || |||||||| || |||||||| || ||||| || || || || || || || Sbjct 33762 AACGACAGACCGGGCATGAGACCACGCTTCTTGAGCCAGAAGATCGAGGCGAACGAGCCC 33821 Query 36269 GAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAAC-CGGCAC- 36326 || ||||| || || ||||| ||||||||||| | ||| | ||| | | ||| ||||| Sbjct 33822 GAGAAGAAGATGCCCTCTACGGCCGCAAAGGCCACAAGGCGCTC-CGAGAACGAGGCACG 33880 Query 36327 --TGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTC 36384 |||| ||||| | ||||| ||||||||||| || ||| ||| || ||||| Sbjct 33881 CTTGTCCGAGATCCAGCGAAGCGCCCACTCGGCCTTCTTCTTCACAACAGGGATCGTCTC 33940 Query 36385 TATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAG 36444 ||||| || || || || | | || | || || ||||||| || Sbjct 33941 GATAGCGTTGAACAGGAAGGCGCGCTGCTCGGGCTCGCGGATGTACGTGTCAATCAGGAG 34000 Query 36445 ACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGC 36504 ||| | ||||| || ||||| ||||| || || || ||||| || || | ||| Sbjct 34001 CGAGTACGTCTCCGAGTGGATGTTCTCAATCATGATCTGGAAACCGTAAAAGCAGCGAGC 34060 Query 36505 CTCGGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTC 36564 |||||| ||| || || || | || || || | | ||| || ||||| || || || Sbjct 34061 CTCGGTCGCCTGGACCTCGGTGCTGAAGCGCTCCACGAGATTCTCGTTCACAATACCATC 34120 Query 36565 ACTGGCTGCAAAAAACGCCAATACATGTTTTATAAA---ATATTTTTCGTTTGGTGTTAG 36621 || || ||||| |||| ||||| | | ||| | | ||| | | | Sbjct 34121 CGACGCAGCGAAAAAGGCCAGCACATGGCTCACAAAGTGACGCTCACCGTCCGTCATGCG 34180 Query 36622 TTTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGC 36681 || | ||| ||||| | || || || | || | || || | ||||| || || || Sbjct 34181 GTTGTCCCAGTCATTCAGGTCGTTCGACAGGTCAATCTCCTCGGCGGTCCAGAACGACGC 34240 Query 36682 CTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAA 36738 ||| ||||| || ||||| | |||||| || || || |||| || || | ||||| Sbjct 34241 CTCGGCCTTCTTGTACATCTGCCAGATCTCGTGGTAGCGAATCGGGAAGAGCACAAA 34297 Score = 140 bits (154), Expect = 4e-28 Identities = 350/527 (66%), Gaps = 6/527 (1%) Strand=Plus/Minus Query 66171 TGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATG 66230 ||||| || |||| ||| ||||| | | || || || ||||| || || || || | | Sbjct 46704 TGCCATGGCTCCAGGTAGATGGCAAATGCGCCGGGGCGCTTGTTGCCACCTTGGTCGACG 46645 Query 66231 TATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTG 66290 || | || ||||| || | || | | ||| || | |||||| || ||| || Sbjct 46644 TAGCGTGCCGTGTTGTTGAATACGCGAAGCATGGGCACAATACCGTTACTGACACCGTTC 46585 Query 66291 GTCCCGGAGATATAGCTTCCACTTGCACGAATATTACTAATTGATAGACCTATTCCCCCT 66350 || |||| ||||| || | ||||| |||||| ||| ||||| || || || Sbjct 46584 GTGCCGGCAATATACGAGCCTGTAGCACGGATATTATGAATGTTCAGACCAATACCGCCG 46525 Query 66351 GCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCA 66410 ||| | || || || | || || || | || || ||||| ||||| || || Sbjct 46524 GCCGTCTTCGAAATCATAGCACAGGTCTTGAGTGTGTCGTAGATACCCTCGATCGAGTCG 46465 Query 66411 TCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGA--CGACTAGTTCCCGCATTAA 66468 ||| ||||| | | || || || |||||||| || || | || || || || | Sbjct 46464 TCCTTCATGCTCACGAGGAAGCACGACGACATTTGCGGATTCGGC--GTACCAGCGTTGA 46407 Query 66469 ATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAA-GTAGATTGTACGTCTCAATA 66527 | | || || || ||||||||||| |||||||| | |||| ||||| |||||||| Sbjct 46406 ACAGCGTGGGCGATGCGTGCGTAAAAGCCTTTTCAGACATGTAG-TTGTAGGTCTCAATC 46348 Query 66528 GCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGT 66587 || || || || ||||| ||||| || |||||||| | |||||||||||| Sbjct 46347 GCGCTCTCAATGTCTTCGCCGTGAATACCTACAGCCACACGCATAAGCATGTGCTGAGGC 46288 Query 66588 CTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCA 66647 | ||| | | |||| || || || || ||| || |||| ||| || || || Sbjct 46287 CGCTCAGCCACCTTGCCATTGATGCGCAGCAGGTATGAACGCTCCAGAGTCTTGAATCCG 46228 Query 66648 AAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAG 66694 ||| ||||||| ||||| || |||||||||||| | |||| ||| Sbjct 46227 AAAAAGTTGTAGTGGAAGTCGCGGTCGTAAATAATAGCAGAGTCGAG 46181 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658172232325960