Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20restricta_20[genbank_20GCA_5F001264725.1_202015-08-11] 69 sequences; 7,260,223 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq30 158 2e-33 >seq30 Length=52135 Score = 158 bits (174), Expect = 2e-33 Identities = 453/689 (66%), Gaps = 12/689 (2%) Strand=Plus/Minus Query 79891 CCAGGACATTCGTCAGGACACATCAACGACCACTCTCCATCATCCTTTACTCGTTTCATA 79950 ||||| |||| | |||||||| | |||||| ||| | | | || || || |||||| Sbjct 46863 CCAGGTGCTTCGGCGGGACACATAAGCGACCAGTCTTCGTTCTTCTCAACACGCTTCATA 46804 Query 79951 AAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGT--TTC 80008 || | || || | ||| | || | ||| || || | | | || |||||| || Sbjct 46803 AACAAGTCGGGGACCCACAAGGCCAAAAACAGGTCACGAGCAC---GCACCTCGTCTTTG 46747 Query 80009 CTGTA-TTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTAT 80067 | || ||||| || || | ||| | | | ||| || ||||| || |||| ||| Sbjct 46746 CCGTGGTTCTTGCGCAGGTCAACAAACTCAAACACATCCGAGTGCCATGGCTCCAGGTAG 46687 Query 80068 ATGGCCATAACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTA 80127 ||||| | | || || || ||||| || || || || | ||| | || ||||| || Sbjct 46686 ATGGCAAATGCGCCGGGGCGCTTGTTGCCACCTTGGTCGACGTAGCGTGCCGTGTTGTTG 46627 Query 80128 TAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTT 80187 | || | | ||| || | |||||| || ||| || || |||| ||||| Sbjct 46626 AATACGCGAAGCATGGGCACAATACCGTTACTGACACCGTTCGTGCCGGCAATATACGAG 46567 Query 80188 CCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAAT 80247 || | ||||| |||||| ||| ||||| || || || ||| | || || || | Sbjct 46566 CCTGTAGCACGGATATTATGAATGTTCAGACCAATACCGCCGGCCGTCTTCGAAATCATA 46507 Query 80248 GCGCATCGTTTTAACGTATCATAGATGCCCTCTATGCTATCATCAATCATGTTAAGTAGA 80307 || || || | || || ||||| ||||| || || || ||||| | | || Sbjct 46506 GCACAGGTCTTGAGTGTGTCGTAGATACCCTCGATCGAGTCGTCCTTCATGCTCACGAGG 46447 Query 80308 AAACAGCTAGACATTTGGTGA--CGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGT 80365 || || |||||||| || || | || || || || || | || || || |||| Sbjct 46446 AAGCACGACGACATTTGCGGATTCGGC--GTACCAGCGTTGAACAGCGTGGGCGATGCGT 46389 Query 80366 GCGTAAACCATTTTTCAGACA-GTAGATTGTACGTCTCAATAGCTGATTCTATATCCCAT 80424 ||||||| |||||||||| |||| ||||| |||||||| || || || || Sbjct 46388 GCGTAAAAGCCTTTTCAGACATGTAG-TTGTAGGTCTCAATCGCGCTCTCAATGTCTTCG 46330 Query 80425 TGATGAATTCCTACCGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTA 80484 ||||| ||||| || |||||||| | |||||||||||| | ||| | | |||| | Sbjct 46329 CCGTGAATACCTACAGCCACACGCATAAGCATGTGCTGAGGCCGCTCAGCCACCTTGCCA 46270 Query 80485 TTTATTTTCAACAAGTAAGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAG 80544 || || || || ||| || |||| ||| || || || ||| ||||||| ||| Sbjct 46269 TTGATGCGCAGCAGGTATGAACGCTCCAGAGTCTTGAATCCGAAAAAGTTGTAGTGGAAG 46210 Query 80545 TCTCGTTCGTAAATAATAACCGAGTTGAG 80573 || || |||||||||||| | |||| ||| Sbjct 46209 TCGCGGTCGTAAATAATAGCAGAGTCGAG 46181 Score = 156 bits (172), Expect = 6e-33 Identities = 395/597 (66%), Gaps = 8/597 (1%) Strand=Plus/Plus Query 49951 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAA 50010 |||| || || || || || ||||||||||||||| | ||| || ||||| || Sbjct 33702 AACAGCAGGCACGCAAAGTCAGTGTGCAGACCCTCGTCACGCGAAATAAGCTCGTTCGAG 33761 Query 50011 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCA 50070 |||| || |||||||| || |||||||| || ||||| || || || || || || || Sbjct 33762 AACGACAGACCGGGCATGAGACCACGCTTCTTGAGCCAGAAGATCGAGGCGAACGAGCCC 33821 Query 50071 GAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAAC-TGGCGC- 50128 || |||||||| || ||||| || |||||||| ||||| | ||| | | ||| ||| | Sbjct 33822 GAGAAGAAGATGCCCTCTACGGCCGCAAAGGCCACAAGGCGCTC-CGAGAACGAGGCACG 33880 Query 50129 --TGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTC 50186 |||| ||||| | ||||| ||||||||||| || ||| ||| ||||| || Sbjct 33881 CTTGTCCGAGATCCAGCGAAGCGCCCACTCGGCCTTCTTCTTCACAACAGGGATCGTCTC 33940 Query 50187 TATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAG 50246 || || || || || || | | || | || || || |||| || Sbjct 33941 GATAGCGTTGAACAGGAAGGCGCGCTGCTCGGGCTCGCGGATGTACGTGTCAATCAGGAG 34000 Query 50247 ACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGC 50306 ||| | ||||| || ||||| ||||| ||||| || ||||| || || | ||| Sbjct 34001 CGAGTACGTCTCCGAGTGGATGTTCTCAATCATGATCTGGAAACCGTAAAAGCAGCGAGC 34060 Query 50307 CTCGGTAATCTGCACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTC 50366 |||||| ||| || || || | || || || | | ||| || ||||| || || || Sbjct 34061 CTCGGTCGCCTGGACCTCGGTGCTGAAGCGCTCCACGAGATTCTCGTTCACAATACCATC 34120 Query 50367 ACTGGCTGCAAAAAACGCCAATACATGTTTTATAAA---ATGTTTTTCGTTGGGTGTTAG 50423 || || ||||| |||| ||||| | | ||| | | | ||| | | | Sbjct 34121 CGACGCAGCGAAAAAGGCCAGCACATGGCTCACAAAGTGACGCTCACCGTCCGTCATGCG 34180 Query 50424 TTTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGC 50483 || | ||| ||||| | || || || | || | || || | ||||| || || || Sbjct 34181 GTTGTCCCAGTCATTCAGGTCGTTCGACAGGTCAATCTCCTCGGCGGTCCAGAACGACGC 34240 Query 50484 CTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGGATTGGGAAAATAACAAA 50540 ||| ||||| || ||||| | |||||| || || || | || ||||| | ||||| Sbjct 34241 CTCGGCCTTCTTGTACATCTGCCAGATCTCGTGGTAGCGAATCGGGAAGAGCACAAA 34297 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718268180493160