Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20restricta_20[genbank_20GCA_5F001264725.1_202015-08-11] 69 sequences; 7,260,223 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq30 150 2e-31 >seq30 Length=52135 Score = 150 bits (166), Expect = 2e-31 Identities = 394/597 (66%), Gaps = 8/597 (1%) Strand=Plus/Plus Query 42056 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAA 42115 |||| || || || || || |||||||||||| || | ||| | ||||| || Sbjct 33702 AACAGCAGGCACGCAAAGTCAGTGTGCAGACCCTCGTCACGCGAAATAAGCTCGTTCGAG 33761 Query 42116 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCA 42175 |||| || |||||||| || |||||||| || ||||| || || || || || || || Sbjct 33762 AACGACAGACCGGGCATGAGACCACGCTTCTTGAGCCAGAAGATCGAGGCGAACGAGCCC 33821 Query 42176 GAAAAGAAGATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAAC-CGGCAC- 42233 || |||||||| || ||||| ||||||||||| | ||| | ||| | | ||| ||||| Sbjct 33822 GAGAAGAAGATGCCCTCTACGGCCGCAAAGGCCACAAGGCGCTC-CGAGAACGAGGCACG 33880 Query 42234 --TGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTC 42291 |||| ||||| | ||||| ||||||||||| || ||| ||| ||||| || Sbjct 33881 CTTGTCCGAGATCCAGCGAAGCGCCCACTCGGCCTTCTTCTTCACAACAGGGATCGTCTC 33940 Query 42292 TATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCGATCAAAAG 42351 || || || || || || | | || | || || || |||| || Sbjct 33941 GATAGCGTTGAACAGGAAGGCGCGCTGCTCGGGCTCGCGGATGTACGTGTCAATCAGGAG 34000 Query 42352 ACTATACATTTCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGC 42411 ||| | || || || ||||| ||||| ||||| || ||||| || || | || Sbjct 34001 CGAGTACGTCTCCGAGTGGATGTTCTCAATCATGATCTGGAAACCGTAAAAGCAGCGAGC 34060 Query 42412 CTCGGTAACCTGTACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTC 42471 |||||| |||| || || || | || || || | | ||| |||||||| || || || Sbjct 34061 CTCGGTCGCCTGGACCTCGGTGCTGAAGCGCTCCACGAGATTCTCGTTCACAATACCATC 34120 Query 42472 ACTGGCTGCAAAAAACGCCAATACATGTTTTATAAA---ATATTTTTCGTCCGGTGTTAA 42528 || || ||||| |||| ||||| | | ||| | | |||||| | Sbjct 34121 CGACGCAGCGAAAAAGGCCAGCACATGGCTCACAAAGTGACGCTCACCGTCCGTCATGCG 34180 Query 42529 TTTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGC 42588 || | ||| ||||| | || || || | || | || || | ||||| || || || Sbjct 34181 GTTGTCCCAGTCATTCAGGTCGTTCGACAGGTCAATCTCCTCGGCGGTCCAGAACGACGC 34240 Query 42589 TTCTGCCTTTTTATACATATTCCAGATATCATGATATTGAATTGGGAAAATAACAAA 42645 || ||||| || ||||| | |||||| || || || |||| ||||| | ||||| Sbjct 34241 CTCGGCCTTCTTGTACATCTGCCAGATCTCGTGGTAGCGAATCGGGAAGAGCACAAA 34297 Score = 141 bits (156), Expect = 1e-28 Identities = 554/857 (65%), Gaps = 18/857 (2%) Strand=Plus/Minus Query 72126 ATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGCCGTTTGTTTCCTCCCTG 72185 ||| || ||||| || |||| ||| ||||| | | || || || ||||| || || || Sbjct 46711 ATCCGAGTGCCATGGCTCCAGGTAGATGGCAAATGCGCCGGGGCGCTTGTTGCCACCTTG 46652 Query 72186 ATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGC 72245 || | ||| | || ||||| || | || | | ||| || | |||||| || | Sbjct 46651 GTCGACGTAGCGTGCCGTGTTGTTGAATACGCGAAGCATGGGCACAATACCGTTACTGAC 46592 Query 72246 ACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTGCTAATTGATAGACCTAT 72305 ||| || || |||| ||||| || | ||||| ||||| ||| ||||| || Sbjct 46591 ACCGTTCGTGCCGGCAATATACGAGCCTGTAGCACGGATATTATGAATGTTCAGACCAAT 46532 Query 72306 TCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTAT 72365 || || ||| | || || || | || || || | || || ||||| ||||| || Sbjct 46531 ACCGCCGGCCGTCTTCGAAATCATAGCACAGGTCTTGAGTGTGTCGTAGATACCCTCGAT 46472 Query 72366 ACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGA--CGACTAGTTCCC 72423 || ||| ||||| | | || || || |||||||| || || | || || Sbjct 46471 CGAGTCGTCCTTCATGCTCACGAGGAAGCACGACGACATTTGCGGATTCGGC--GTACCA 46414 Query 72424 GCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACA-GTAGATTGTACGT 72482 || || || | || || || ||||||||||| |||||||||| |||| ||||| || Sbjct 46413 GCGTTGAACAGCGTGGGCGATGCGTGCGTAAAAGCCTTTTCAGACATGTAG-TTGTAGGT 46355 Query 72483 CTCAATAGCTGATTCTATATCCCATTGATGTATTCCTACCGCGACACGCATTAACATATG 72542 |||||| || || || || || || ||||| || |||||||| | ||| || Sbjct 46354 CTCAATCGCGCTCTCAATGTCTTCGCCGTGAATACCTACAGCCACACGCATAAGCATGTG 46295 Query 72543 CTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTT 72602 |||||| | ||| | | |||| ||| || || || ||| || |||| ||| || Sbjct 46294 CTGAGGCCGCTCAGCCACCTTGCCATTGATGCGCAGCAGGTATGAACGCTCCAGAGTCTT 46235 Query 72603 AAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGTTTATC 72662 || || ||| ||||||| ||||| || |||||||||||| | || | ||| || Sbjct 46234 GAATCCGAAAAAGTTGTAGTGGAAGTCGCGGTCGTAAATAATAGCAGAGTCGAGCACGTC 46175 Query 72663 CTTATATTTGTTAACTATATCCATGGTGATACTT--GAAATAATCGGAGAATGTTTCCCA 72720 | || | || | | | || ||| ||||| || | || || || Sbjct 46174 GCGGTGCTTCATCACGGTGTGGAACGT--CTCTTCAGAAATCATAGAGCTGTGCTTGCCC 46117 Query 72721 TTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTT 72780 | || || || ||||||| | | ||||| || || | ||||| || || || Sbjct 46116 GTCTTCGGGTTCACATAGTCGTGCAGATCCTGAATGACCTGGCTAAAGCCCTTCTTCGTC 46057 Query 72781 TCCTTGTGTAGATT--TGATACGGCTATTCTGGCGGCTAGAATGGCATAATCTGGATGTT 72838 |||||||| || || |||| ||| || | ||||| || | ||| || || |||||| Sbjct 46056 TCCTTGTGCAGGTTGCTGAT--GGCGATACGCGCGGCCAGCACGGCGTAGTCGGGATGTG 45999 Query 72839 GTGTAGTACAAGT-GGCTGCTATTTCTGCTGCCAGAGTGTCCAATTCTACCGTTGTTACT 72897 || || | || ||| || | || || || || |||||| || ||||| || ||| Sbjct 45998 TCGTGGT-CTTGTAGGCAGCCGTCTCAGCAGCTAGGTTGTCCAGCTCGACCGTGGTAACT 45940 Query 72898 CCATTATATATTCCTTGGATAACCTTCATAGCTATTTTAATAGGATCTATAT-GATCAGT 72956 || | || || || | || ||||| || |||| || ||||| || | | ||| | Sbjct 45939 CCTTCGTAGATACCGTCAATTACCTTGCGAGTAATTTCGATGGGATCAATGTAGTTCA-T 45881 Query 72957 GTTTAAGCCATAACATA 72973 || | |||||| |||| Sbjct 45880 GTCAAGGCCATAGCATA 45864 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671138621142440