Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20restricta_20[genbank_20GCA_5F001264725.1_202015-08-11] 69 sequences; 7,260,223 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq30 260 2e-64 >seq30 Length=52135 Score = 260 bits (288), Expect = 2e-64 Identities = 573/850 (67%), Gaps = 23/850 (3%) Strand=Plus/Minus Query 125010 TATCATGACATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAG 125069 || || || || ||| | |||||||| ||||| |||| || || ||||| | ||| ||| Sbjct 34276 TACCACGAGATCTGGCAGATGTACAAGAAGGCCGAGGCGTCGTTCTGGACCGCCGAGGAG 34217 Query 125070 GTCGATCTGTCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAG 125129 | || ||||| || |||||| | || ||||| | || |||| || |||||| | Sbjct 34216 ATTGACCTGTCGAACGACCTGAATGACTGGGACAACCGCATGACGGACGGTGAGCGTCAC 34157 Query 125130 TTTATATCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCTG 125189 ||| | || | ||||||| || || | || ||||| || || ||||| ||||| Sbjct 34156 TTTGTGAGCCATGTGCTGGCCTTTTTCGCTGCGTCGGATGGTATTGTGAACGAGAATCTC 34097 Query 125190 TTGACACGATTCTCTCAAGAGTTGACCATTCCA--GAGGTGTCG-TGCTTTTACGGATTC 125246 || || ||| ||| | ||| | | |||| ||| ||||||||||| ||| Sbjct 34096 GTGGAGCGCTTCAGCACCGAGGT--CCAGGCGACCGAGGC-TCGCTGCTTTTACGGTTTC 34040 Query 125247 CAAATCATGATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATT 125306 || ||||||||||||||| | |||||||| | |||||| |||||||||| |||||| Sbjct 34039 CAGATCATGATTGAGAACATCCACTCGGAGACGTACTCGCTCCTGATTGACACGTACATC 33980 Query 125307 CGCGATCC---GCAACGTAAACACATGCTCTTTAACGCAATCGACACGGTGCCGTCTATA 125363 ||||| || ||| || | | || || ||||| ||||| ||| | || | | Sbjct 33979 CGCGAGCCCGAGCAGCGCGC---CTTCCTGTTCAACGCTATCGAGACGATCCCTGTTGTG 33923 Query 125364 CGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGAC 125423 || ||||| | |||| | |||| |||||| ||| | | |||| | | || Sbjct 33922 AAGAAGAAGGCCGAGTGGGCGCTTCGCTGGATCTCGGACAAGCGTGCCTCGTTCTCGGAG 33863 Query 125424 AGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATC 125483 | || ||||| || || |||||||||||||||||||| ||||| || || | ||| Sbjct 33862 CGCCTTGTGGCCTTTGCGGCCGTAGAGGGCATCTTCTTCTCGGGCTCGTTCGCCTCGATC 33803 Query 125484 TTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCT 125543 || |||||||||||||| || ||||||||||| ||| || | |||||| |||| || Sbjct 33802 TTCTGGCTCAAGAAGCGTGGTCTCATGCCCGGTCTGTCGTTCTCGAACGAGCTTATTTCG 33743 Query 125544 CGAGACGAGGGCCTACACTGTGACTTTGCCATTCTACTGTTTCGCAACTATCTGCGTCCC 125603 || |||||||| || ||| ||||||||| || ||||| || | | ||| Sbjct 33742 CGTGACGAGGGTCTGCACACTGACTTTGCGTGCCTGCTGTT---CAGCCACCTG------ 33692 Query 125604 GAGTGCAGATCCAGCGATGAAAAGGTCATCAACATTGTAACCGATGCCGTGAGGATAGAA 125663 || | || | || | ||| | | |||| | || || || ||| || || Sbjct 33691 AAGAAGCGCTCGCACCCCGACACGGTGAACCGCATTATTACGGAGGCTGTGGCCATTGAG 33632 Query 125664 CAAGAGTTTCTAACCGAATCCCTACCGGTCAGCATGATTGGCATGAACTGCAAG-CTAAT 125722 || || ||| | | || |||| || ||| | ||||| ||||| ||| | || || Sbjct 33631 CAGGACTTTTTGTCGGATGCCCTGCCCGTCTCGCTCATTGGTATGAA-TGCGCGCCTGAT 33573 Query 125723 GTGCGAGTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGATTGGCCGCAAGAT 125782 |||| ||||||| || |||||||| || || || ||| | | || ||| ||| Sbjct 33572 GTGCCAGTACATTGAATTTGTGGCGGACCGCCTGCTGGTGGCGCTGGGCTGCCCGAAGCA 33513 Query 125783 TTACAACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGGTAAGACCAA 125842 ||| || | | ||| |||||||| || ||| | || || || | || ||| | || Sbjct 33512 CTACCACTCGACGAACCCCTTTGACTTTATGGAGAATATTTCGCTGCAAGGCAAGTCGAA 33453 Query 125843 CTTTTTCGAG 125852 |||||||||| Sbjct 33452 CTTTTTCGAG 33443 Score = 163 bits (180), Expect = 4e-35 Identities = 358/529 (68%), Gaps = 12/529 (2%) Strand=Plus/Plus Query 96862 CACGATACGTTACACAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAAC 96921 |||| ||||| || || ||||| || || || ||||| | ||| ||||| |||| | Sbjct 46638 CACGCTACGTCGACCAAGGTGGCAACAAGCGCCCCGGCGCATTTGCCATCTACCTGGAGC 46697 Query 96922 CTTGGCACGCGGACGTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGG 96981 | |||||| |||| || ||||| ||| | || ||||||| ||| ||| || |||| Sbjct 46698 CATGGCACTCGGATGTGTTTGAGTTTGTTGACCTGCGCAAGAACCACGGCAAAGACGAGG 46757 Query 96982 CACGAGCCAGGGACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTC- 97040 || || | ||| |||||| || | ||||| || || ||||| |||||||| || Sbjct 46758 TGCGTGCTCGTGACCTGTTTTTGGCCTTGTGGGTCCCCGACTTGTTTATGAAGCGTGTTG 46817 Query 97041 --AACGACGGTGGCTACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATT 97098 || ||| | ||||| || ||||| |||| | |||| || || || || | Sbjct 46818 AGAAGAACGAAG---ACTGGTCGCTTATGTGTCCCGCCGAAGCACCTGGCCTTTCTGACT 46874 Query 97099 GCTGGGGCGAAGAGTTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGCC--GATACGT 97156 ||| ||||||||||||||| |||| ||||||| ||||| | | || | Sbjct 46875 GCTATGGCGAAGAGTTTGAGCAGCTGTACGAAAAGTACGAGCGCGAGGGACGTGCTAAGC 46934 Query 97157 GAGACGAGTCGATGCACGAGAA-CTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTG 97215 | ||| ||| | || | |||| |||||| | | ||| || || ||| | ||||| | Sbjct 46935 G-CACG-GTCAAGGC-CCAGAAGCTGTGGTACTCGATCCTGGAAGCGCAGATCGAGACGG 46991 Query 97216 GAACTCCGTACATTCTCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGG 97275 | | || | ||| || ||||| || | | || || || |||||||| || | | Sbjct 46992 GCAACCCCTTCATGCTGTACAAAGACTCGGCCAACCGTAAGAGCAACCAGAAGAACCTCG 47051 Query 97276 GCACCATCAAGGGCTCCAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGA 97335 |||| |||||| |||| || ||||| || || ||| | || ||| ||| ||||| |||| Sbjct 47052 GCACGATCAAGAGCTCGAACCTGTGTACAGAGATTATGGAATACAGCTCGCCGGAGGAGA 47111 Query 97336 CGGCAGTTTGCGTTCTGGCATCGGTCAATCTGCCCAAGTTTGTAGAGGG 97384 |||| || ||| |||| || | |||||| | |||| | ||||| Sbjct 47112 CGGCCGTATGCAACTTGGCCTCCATTGCTCTGCCGACGTTTATCGAGGG 47160 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741058560836440