Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20restricta_20[genbank_20GCA_5F001264725.1_202015-08-11] 69 sequences; 7,260,223 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq30 150 2e-31 >seq30 Length=52135 Score = 150 bits (166), Expect = 2e-31 Identities = 394/597 (66%), Gaps = 8/597 (1%) Strand=Plus/Plus Query 32652 AACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAA 32711 |||| || || || || || ||| ||||||||||| | ||| | ||||| || Sbjct 33702 AACAGCAGGCACGCAAAGTCAGTGTGCAGACCCTCGTCACGCGAAATAAGCTCGTTCGAG 33761 Query 32712 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCA 32771 |||| || |||||||| || |||||||| || ||||| || || || || || || || Sbjct 33762 AACGACAGACCGGGCATGAGACCACGCTTCTTGAGCCAGAAGATCGAGGCGAACGAGCCC 33821 Query 32772 GAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAAC-CGGCGC- 32829 || ||||| || || ||||| ||||||||||| | ||| | ||| | | ||| ||| | Sbjct 33822 GAGAAGAAGATGCCCTCTACGGCCGCAAAGGCCACAAGGCGCTC-CGAGAACGAGGCACG 33880 Query 32830 --TGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTC 32887 |||| ||||| | ||||| ||||||||||| || ||| ||| || ||||| Sbjct 33881 CTTGTCCGAGATCCAGCGAAGCGCCCACTCGGCCTTCTTCTTCACAACAGGGATCGTCTC 33940 Query 32888 TATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAG 32947 ||||| || || || || | | || | || || ||||||| || Sbjct 33941 GATAGCGTTGAACAGGAAGGCGCGCTGCTCGGGCTCGCGGATGTACGTGTCAATCAGGAG 34000 Query 32948 ACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGC 33007 ||| | ||||| || ||||| ||||| || || || ||||| ||||| | ||| Sbjct 34001 CGAGTACGTCTCCGAGTGGATGTTCTCAATCATGATCTGGAAACCGTAAAAGCAGCGAGC 34060 Query 33008 CTCGGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTC 33067 |||||| ||| || || || | || || || | | ||| || ||||| || || || Sbjct 34061 CTCGGTCGCCTGGACCTCGGTGCTGAAGCGCTCCACGAGATTCTCGTTCACAATACCATC 34120 Query 33068 ACTGGCTGCAAAAAACGCCAATACATGTTTTATAAA---ATATTTTTCGTCTGGTGTTAG 33124 || || ||||| |||| ||||| | | ||| | | |||| | | | Sbjct 34121 CGACGCAGCGAAAAAGGCCAGCACATGGCTCACAAAGTGACGCTCACCGTCCGTCATGCG 34180 Query 33125 TTTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGC 33184 || | ||| ||||| | || || || | || | || || | ||||| || || || Sbjct 34181 GTTGTCCCAGTCATTCAGGTCGTTCGACAGGTCAATCTCCTCGGCGGTCCAGAACGACGC 34240 Query 33185 CTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAA 33241 ||| ||||| || ||||| | |||||| || || || |||| || || | ||||| Sbjct 34241 CTCGGCCTTCTTGTACATCTGCCAGATCTCGTGGTAGCGAATCGGGAAGAGCACAAA 34297 Score = 141 bits (156), Expect = 1e-28 Identities = 451/692 (65%), Gaps = 12/692 (2%) Strand=Plus/Minus Query 63020 AGTCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTC 63079 || ||||| ||| | |||||||| | |||||| ||| ||| | || || || ||| Sbjct 46866 AGGCCAGGTGCTTCGGCGGGACACATAAGCGACCAGTCTTCGTTCTTCTCAACACGCTTC 46807 Query 63080 ATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGT-- 63137 ||||| | || || | ||| | || | ||| || || | | | | |||||| Sbjct 46806 ATAAACAAGTCGGGGACCCACAAGGCCAAAAACAGGTCACGAGCAC---GCACCTCGTCT 46750 Query 63138 TTCCTGTA-TTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAG 63196 || | || ||||| || || | ||| | | | ||| || ||||| || |||| | Sbjct 46749 TTGCCGTGGTTCTTGCGCAGGTCAACAAACTCAAACACATCCGAGTGCCATGGCTCCAGG 46690 Query 63197 TATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTA 63256 || ||||| | | || || || ||||| || || || || | ||| | || ||||| Sbjct 46689 TAGATGGCAAATGCGCCGGGGCGCTTGTTGCCACCTTGGTCGACGTAGCGTGCCGTGTTG 46630 Query 63257 TTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCTGAGATATAG 63316 || | || | | ||| || | |||||| || ||| || || || | ||||| Sbjct 46629 TTGAATACGCGAAGCATGGGCACAATACCGTTACTGACACCGTTCGTGCCGGCAATATAC 46570 Query 63317 CTTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATT 63376 || | ||||| |||||| ||| ||||| || || || ||| | || || || Sbjct 46569 GAGCCTGTAGCACGGATATTATGAATGTTCAGACCAATACCGCCGGCCGTCTTCGAAATC 46510 Query 63377 AATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGT 63436 | || || || | || || ||||| ||||| || || ||| ||||| | | Sbjct 46509 ATAGCACAGGTCTTGAGTGTGTCGTAGATACCCTCGATCGAGTCGTCCTTCATGCTCACG 46450 Query 63437 AGAAAACAGCTAGACATTTGGTGA--CGACTAGTTCCCGCATTAAATAAGGTAGGAGAAG 63494 || || || |||||||| || || | || || || || || | || || || | Sbjct 46449 AGGAAGCACGACGACATTTGCGGATTCGGC--GTACCAGCGTTGAACAGCGTGGGCGATG 46392 Query 63495 CGTGAGTAAACCATTTTTCAGAAA-GTAGATTGTACGTCTCAATAGCTGAGTCTATATCC 63553 |||| ||||| |||||||| | |||| ||||| |||||||| || || || || Sbjct 46391 CGTGCGTAAAAGCCTTTTCAGACATGTAG-TTGTAGGTCTCAATCGCGCTCTCAATGTCT 46333 Query 63554 CATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTG 63613 ||||| ||||| || |||||||| | |||||||||||| | ||| | | |||| Sbjct 46332 TCGCCGTGAATACCTACAGCCACACGCATAAGCATGTGCTGAGGCCGCTCAGCCACCTTG 46273 Query 63614 TTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAA 63673 || || || || ||| || |||| ||| || || || ||| ||||||| Sbjct 46272 CCATTGATGCGCAGCAGGTATGAACGCTCCAGAGTCTTGAATCCGAAAAAGTTGTAGTGG 46213 Query 63674 AAGTCTCGTTCGTAAATAATAACCGAGTTGAG 63705 ||||| || |||||||||||| | |||| ||| Sbjct 46212 AAGTCGCGGTCGTAAATAATAGCAGAGTCGAG 46181 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633631453492400