Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20restricta_20[genbank_20GCA_5F001264725.1_202015-08-11] 69 sequences; 7,260,223 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq17 107 2e-18 seq67 95.1 1e-14 >seq17 Length=189903 Score = 107 bits (118), Expect = 2e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||| | || || || || || || ||||| ||| |||| || || ||||| | || Sbjct 58189 ATGCAAGTGTTCGTCAAGACCTTGACGGGTAAGACGATCACCCTCGAGGTGGAGTCTTCC 58248 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || || | || || || || ||||||||||||||||| || || ||| Sbjct 58249 GACACGATCGAGAATGTGAAGGCCAAGATCCAGGACAAGGAGGGTATTCCTCCGGACCAA 58308 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || |||||||| || ||| | |||||| |||||| | ||| |||||| Sbjct 58309 CAGCGTCTGATCTTTGCCGGTAAGCAGCTGGAGGATGGCCGCACGCTGAGCGACTACAAC 58368 Query 22399 ATTCAAAAAGAATCCAC 22415 || || || || || || Sbjct 58369 ATCCAGAAGGAGTCGAC 58385 >seq67 Length=407448 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| || || || || | || || || ||| |||| || || || || | | Sbjct 70853 ATGCAAATCTTCGTCAAGACCCTGACTGGCAAGACGATCACGCTCGAGGTCGAGTCGTCT 70794 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| || | || || || || ||||||||||||||||| || || ||| Sbjct 70793 GACACGATCGACAATGTGAAGGCCAAGATCCAGGACAAGGAGGGTATTCCTCCGGACCAA 70734 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || |||||||| || || || || ||| | ||||| ||| || || ||| |||||| Sbjct 70733 CAGCGTCTTATCTTCGCGGGTAAGCAGCTGGAGGACGGCCGTACGCTCAGCGACTACAAC 70674 Query 22399 ATTCAAAAAGAATCCAC 22415 || ||||| || || || Sbjct 70673 ATCCAAAAGGAGTCGAC 70657 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419727647034985