Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20restricta_20[genbank_20GCA_5F001264725.1_202015-08-11] 69 sequences; 7,260,223 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq68 192 1e-43 seq14 98.7 2e-15 seq25 89.7 1e-12 >seq68 Length=315016 Score = 192 bits (212), Expect = 1e-43 Identities = 352/514 (68%), Gaps = 4/514 (1%) Strand=Plus/Plus Query 218503 AACATCCCCGTCCCTGACTTCATCGACAAGGAGCTCATTCTTTTCTCGCGGTATGATGTG 218562 ||||| || || ||||||| ||| ||||||| || |||||||| ||| | ||| Sbjct 82349 AACATTCCTATCTCTGACTTTATCAACAAGGAACTGATTCTTTTTTCGATGGCTGACAAT 82408 Query 218563 GAGCGTTCTATTCCCAGCGTGGTGGATGGCCTCAAGCCATCGCAGCGTAAGATCCTCTTT 218622 || || |||||||| || ||||||||||| || || ||||| ||| | || ||| Sbjct 82409 ATCCGCTCGATTCCCAGTGTTGTGGATGGCCTAAAACCGGGACAGCGCAAGGTTCTGTTT 82468 Query 218623 GCCGCATTCAAGCGGAACCTGGTTCAAGAAATTAAGGTCGCTCAGTTTTCTGGTTATGTA 218682 | || ||||| || || |||||| |||||| ||| || |||||||| Sbjct 82469 GGTTGCTTTAAGCGCAATCTCAAGACAGAAATCAAGGTCCAGCAGCTTCAGGGTTATGTG 82528 Query 218683 TCCGAAATTTCTGGCTACCATCACGGTGAGCAGAGTCTG--CAGGGTGCCATTGTAGGCA 218740 || || | | | || || || ||||| |||||| || || | | ||||| ||| Sbjct 82529 TCAGAGCATACGGCGTATCACCATGGTGATCAGAGTTTGGTCATG--ACTATTGTCGGCC 82586 Query 218741 TGGCACAGGACTATGTGGGCAGTAACAACATGAACTTGCTGCTCCCCAACGGTCAGTTTG 218800 | || |||||||| |||||||||||| ||||||||||||| |||||||||||||||| Sbjct 82587 TTGCGCAGGACTACTGCGGCAGTAACAACGTGAACTTGCTGCTGCCCAACGGTCAGTTTG 82646 Query 218801 GTTCTCGTCTATTGGGTGGAAAGGATAGTGCTTCTGCCAGGTATATCTTTACAAAGTTGT 218860 || |||| |||| || || ||| ||| ||| | || || || || || Sbjct 82647 GTACTCGAAGCATGGGCGGTAAAGATGCAGCTAGTGCACGTTACATTTTCACGGCAGTGC 82706 Query 218861 CGCCCGTGACGCGCCAGGTGTTCAATCAGGCCGATGATGTGCTCCTTAAGTATCTTGAGG 218920 | | | | ||||| | | ||||| ||| | ||||| | ||||| || || || || | Sbjct 82707 CACGCATTACGCGTCTGATGTTCCATCCGAAAGATGACGACCTCCTCAACTACCTGGATG 82766 Query 218921 ACGATGGTTCTTCGATTGAGCCCGAGTGGTATGTGCCTGCTATTCCGTTTTTGCTCGTAA 218980 |||||||| |||||||| |||||||| || |||| | | ||| | || | | | Sbjct 82767 ACGATGGTCAGAGTATTGAGCCGGAGTGGTACGTTCCTGTTGTACCGCATGTGTTGCTCA 82826 Query 218981 ATGGTGCCAATGGTATCGGGACAGGGTTCAGTAC 219014 ||||||| | || || || || || | ||||| Sbjct 82827 ATGGTGCTGAGGGAATAGGTACGGGCTGGAGTAC 82860 >seq14 Length=1035374 Score = 98.7 bits (108), Expect = 2e-15 Identities = 126/174 (72%), Gaps = 0/174 (0%) Strand=Plus/Plus Query 279345 GGTGAGGATCTGTGTGACTGTGATTTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAAC 279404 || ||||| |||||| ||||| | |||||||| || || |||| ||||||||||| ||| Sbjct 352082 GGCGAGGACCTGTGTAACTGTCAGTTCTCGCTTGCCTACGGTGCCAAGATTCTGCTGAAC 352141 Query 279405 TCTACCCGCCTCAACATCAAGCGTGGCAACCGGTATGGTCTCATCGGTCCCAATGGAGCG 279464 | || ||| | ||||||||| |||| || |||||| |||| || || || Sbjct 352142 ACGGCCACCCTGCGTCTTAAGCGTGGCCACCGCTACGGTCTCTGTGGTCGTAACGGTTCG 352201 Query 279465 GGTAAGAGCACTCTAATGCGCGCCATTGCAAACGGTCAGCTGGAAGGATTTCCT 279518 |||||| || || ||||| ||||| ||||||||| | || || || ||| Sbjct 352202 GGTAAGTCGACGCTCATGCGTGCCATCCAGAACGGTCAGGTTGAGGGCTTCCCT 352255 >seq25 Length=707085 Score = 89.7 bits (98), Expect = 1e-12 Identities = 145/206 (70%), Gaps = 2/206 (1%) Strand=Plus/Minus Query 280170 GGTGTCATTGGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTGACTGGCGAG 280229 ||||||||||| || || |||||||||||| |||||| ||||| || ||||||||||| Sbjct 337919 GGTGTCATTGGCCCGAACGGTGCGGGTAAGAGTACCCTGATCAAGGTGCTGACTGGCGAA 337860 Query 280230 ACCCAGGCCACTGAGGGGTCCGTTTGGAAGCATCCCAACATGCGGATGGCTTACGTCGCT 280289 | | | | ||||| || ||||| || ||| |||| | || | || Sbjct 337859 ATTGTGCCGAACGAGGGCAAGGTCGAAAAGCACCCGAACCTGCGCGTCGCCATGATGGCC 337800 Query 280290 CAGCACGCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCAATACATTCAG 280349 ||||| || ||||| ||| | ||| | |||||||| | |||| | ||| ||||| | Sbjct 337799 CAGCATGCCTTCCATCACCTTGAGCAGCACCTGGAGAAGACTGCATGCCAGTACATCCGC 337740 Query 280350 TGGCGCTATGCAAG-TGGGCAGGATC 280374 ||||| || |||| ||| || |||| Sbjct 337739 TGGCGTTA-CCAAGATGGCCATGATC 337715 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027835891328029