Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20restricta_20[genbank_20GCA_5F001264725.1_202015-08-11] 69 sequences; 7,260,223 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq14 127 5e-24 seq30 84.2 5e-11 >seq14 Length=1035374 Score = 127 bits (140), Expect = 5e-24 Identities = 305/458 (67%), Gaps = 9/458 (2%) Strand=Plus/Minus Query 333903 TGGTTGGTCGGCTCGTCAAGAAGTAGTAGCTTTGCGTTCAGGAGCATTGCACGTGCAAGA 333962 ||||| || ||||||||||| || || | | || || | |||| ||||| ||||| Sbjct 352524 TGGTTCGTGGGCTCGTCAAGCAGCAGGATATCAGCCTTGAACAGCACAGCACGCGCAAGG 352465 Query 333963 GCGAGTTTCATTTTCCACCCTCCTGAAAGAGTGTTAATTGGGGCAGATTGGCGCTCAATA 334022 ||||||||||| ||||| || || || |||| |||| ||| ||| || |||| | Sbjct 352464 GCGAGTTTCATCTTCCAACCACCAGAGAGAGCCGTAATGGGGCCAGCCTGACGCTGCTCA 352405 Query 334023 TCAAAGCCAACCGATTCTAGAGTAGTTACGATCTTTTCACGAGACCAAATGTTTTCCTTT 334082 || ||||| | | | || || | | | || || | ||| | || Sbjct 352404 TCGAAGCCCATCTCCTGAAGCGTCTTGGAAGCCGTCTCGCG-GTCCACGT----TCAGAC 352350 Query 334083 ACTTGTTCATCATTGGCAATGAAGTCAATGATAGCCATGTTAGAATCGGACCCGTCGAGA 334142 ||||| || ||| || ||||| | || | |||| | || || ||||||||| Sbjct 352349 GCTTGTCGGTC--TGG--ATAAAGTCCAGAATCGAGATGTCACCCTCTGATCCGTCGAGA 352294 Query 334143 TCGTGTTCCACGTAAGCAGTTTTCAAAACATCCGCAGAGGGGAACCCTTCAAGCTGACCG 334202 ||||| || ||||| || || | || | || ||||| || |||| ||||||| Sbjct 352293 TCGTGCTCAACGTACCACGTGCGCACCTCTTCGGGCGAAGGGAAGCCCTCAACCTGACCG 352234 Query 334203 TTCACAATAGCGCGCATCAGAGTTGATTTACCCGCCCCGTTTGGCCCACACAGACCGTAG 334262 ||| || || ||||| || || || ||||||| ||||| | ||||| ||||||||| Sbjct 352233 TTCTGGATGGCACGCATGAGCGTCGACTTACCCGAACCGTTACGACCACAGAGACCGTAG 352174 Query 334263 CGGTTTCCACGCTTCAGATTGAACCGCGTATTGTTCAGAAGAATTTTTCCACCATATGCC 334322 |||| |||||||| ||| | | ||||||| ||||| || |||| || || Sbjct 352173 CGGTGGCCACGCTTAAGACGCAGGGTGGCCGTGTTCAGCAGAATCTTGGCACCGTAGGCA 352114 Query 334323 AGAGAAAATTCACAATCACACAGATCCTCACCGACTTC 334360 || || || | ||| | |||||| ||||| || |||| Sbjct 352113 AGCGAGAACTGACAGTTACACAGGTCCTCGCCCTCTTC 352076 >seq30 Length=52135 Score = 84.2 bits (92), Expect = 5e-11 Identities = 112/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 243561 GCTTATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCAT 243620 ||| ||||| ||||| | || ||| | |||||||| ||||| || || |||||| | Sbjct 33599 GCTCATTGGTATGAATGCGCGCCTGATGTGCCAGTACATTGAATTTGTGGCGGACCGCCT 33540 Query 243621 TTTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGA 243680 | | ||||| || | ||| ||| |||| | ||||||||||| ||||||||| Sbjct 33539 GCTGGTGGCGCTGGGCTGCCCGAAGCACTACCACTCGACGAACCCCTTTGACTTTATGGA 33480 Query 243681 GCTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGA 243716 | |||||||| ||||| || | ||||| ||||| Sbjct 33479 GAATATTTCGCTGCAAGGCAAGTCGAACTTTTTCGA 33444 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102879024985150